Sarcophilus harrisii (Tasmanian devil): 100925111
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Entry
100925111 CDS
T02286
Symbol
SREBF2
Name
(RefSeq) sterol regulatory element-binding protein 2 isoform X2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100925111 (SREBF2)
04131 Membrane trafficking [BR:
shr04131
]
100925111 (SREBF2)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
100925111 (SREBF2)
Membrane trafficking [BR:
shr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100925111 (SREBF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
100925111
NCBI-ProteinID:
XP_003772305
Ensembl:
ENSSHAG00000011682
LinkDB
All DBs
Position
5:complement(10049997..10087400)
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AA seq
1124 aa
AA seq
DB search
MLQFVSSQVGDFPDLFSDQLCSSAFPGGSGGNTGSSASANTSTGGTLESPSSRPYSQPPV
PAATAATTATATVATAATAASPAGAATSFPQTSPVQIKVPPAPVSTPPRPAPLLQPRLQP
QPQPQPQLQQQTVMITPTFSTAPQTRIIQQPLLYQNSATSFQVLQPQVPSLVTSPQVQPV
TIQQQVQTVQAQRVLTQAANGTIQTLAPATVQTVAAPQVQQVPVLVQPQIIKTDSLVLTT
LKTDGSPVMAAVQNPALTALTTPIQTTALQVPTLVSGGSGTILTTMPVMVGQEKMPIKQV
PGSVKQPEPPKEGERRTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDY
IKYLQQANHKLRQENMVLKLANQKTKLLKGIDLGSLVDTDIDMKMDDFNQNVLLMSPPAS
ESGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCVLTCLCLSFNP
LTALLERGGAHSSGQSAPAGRSILSFDSGAGGWIDWMFPTLLLWLLNGTIVLSVFIKLLV
HGEPVIRMHSRTSVTFWRHRKQADLDLARGDFAAAASNLQTCLSVLGRALPTSHLDLACS
LSWNVIRYSLQKLKLVRWLMKKVAQRRRRRAAVTGGGFEDEAKTSARDAALAYHKLHQLH
ITGKLPAGSACSDLHMALCAVNLAECAEEEIPPSTQAEIHLTAAVGLKTRCGGKLGFLAS
YFLSRAQSLCGPEHNAVPDSLRWLCHPLGQKFFVERSWSVKSATKESLYCTPRNPADPIA
QVHQAFCKHLLERAVDALVKPQAEKGRAESDEEMCELSSALEYLKLLNSFVDSVGVTAPP
FTNSSVLKSALGPDVTCRWWASAVGMAIGWLQGDDAAVRSQFTEVERIPKALEMAESPLV
KAVFHTCRAMHASLPGKAEIQQSSFGHCERASGHLWGSLNVSGTASDAGLTHVVQLLTCD
LLLSLRTALWQKQAGSNPALGETCHASAPELAGFQRDLGSLRRLAHNFRPAYRKVFLHEA
TVRLMAGASPTRTHQLLEHSLRRRSAQSSKHGELETLPGQRERATAILLACRHLPLSFLS
SPGQRAVLLAEAARTLEKVGDKRSCSDCQQMIVKLSGGTAIAAS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagtttgtcagcagccaggtgggagactttccagacctcttctctgatcagctt
tgtagcagtgctttccccggaggcagcgggggcaacactggctccagcgccagtgctaac
accagcaccgggggcactttggagagcccctcatcgaggccctacagccagccgccagtg
ccggcggcaacagcggcaaccacagcaacggcgacagtggcgacagcagcgacggcagca
tcaccggcaggagcggcgacatccttccctcagacatcccctgtgcagattaaggtcccc
cctgctccggtgtccacccctcctcggcccgcgcccctgcttcagccccgcctgcagcct
cagccccagccccagccccagctgcagcaacagactgtgatgatcaccccgaccttcagc
acagccccccagaccaggatcatccagcagcccctcctgtaccagaactcggccaccagc
ttccaagttctccagccccaagtgccgagcctggtgacgtccccgcaggtgcagccggtc
accattcagcagcaggtgcagacggtgcaggcccagagggtgctgacccaggctgccaat
ggtaccatccagaccctggcgccggccactgtacagacggttgctgctcctcaagttcag
caggtcccggtcctggtgcagcctcagatcattaagacagactcgctcgtcttgaccaca
ctgaaaaccgacggcagccccgtcatggcggccgtgcagaaccccgccctcacagctctc
accacgcccatccagaccaccgccctccaagtccccaccctggtcagtggtggcagtggg
accatcctcaccaccatgcccgtgatggtggggcaggaaaagatgcccatcaaacaggtg
ccagggtccgtcaagcagccagagccgcccaaagaaggggaaagaaggaccacccacaac
atcattgagaagcgctaccggtcatccatcaacgacaagatcatcgagcttaaggacctg
gtcatggggacggacgccaagatgcacaagtccggggtgctgaggaaggccatcgattac
attaaatacctgcagcaagccaatcacaagctgcggcaggagaacatggtgctgaagctg
gccaatcagaagaccaagcttctgaaaggcatcgatctgggcagtctggtggacactgat
atagacatgaagatggacgacttcaaccagaacgttctgttgatgtctcctccagcctcc
gaatcagggtcccaagcgggtttctccccgtattccatcgattcagagccagggagccct
ctgttagatgatgccaaggtcaaagacgagcctgattctcctcctgtggcgctgggcatg
gtggaccgctctcggatcctgctgtgcgtgctcacctgtctgtgtctctccttcaacccc
ctgacggcactgctggaacggggaggggcccacagctcgggccagtcagcgcccgcgggc
cggagcatcctgtcctttgattcaggcgctggcggctggattgattggatgttcccgact
ctccttctgtggctcctaaatggcacgatcgtcctgagcgtcttcatcaagctgctggta
catggggagcccgtgatccggatgcactcgcggacctcggtcacattttggcgccatcgc
aagcaggccgacctagacctggccaggggggactttgccgcggcggcctcaaaccttcag
acgtgcctgtccgtcctgggccgcgcgctgcccacctcccacctggacctggcttgcagc
ctctcctggaacgtgatccggtacagcctgcagaagctgaagctggtgcgctggctgatg
aagaaggtggcgcagcgccggcggcgccgggcggccgtgaccggcggcggctttgaagat
gaggcgaagaccagcgctcgcgacgcagccttggcctaccacaagcttcatcagctgcac
atcacaggaaagctcccagctggctctgcctgctccgatctgcacatggctctgtgtgcc
gttaatctggctgaatgtgccgaggaggagatccccccgagcacccaggctgaaatccat
ctcacggcggctgtggggctcaagactcgctgtggaggcaaactgggcttcttggctagc
tacttcctgagccgagcccaaagcttgtgtggccccgagcacaatgccgtccccgactcc
ctgcgctggctgtgtcatcccctgggccagaagttttttgtggagcggagctggtcggtg
aagtcggccaccaaggagagcctgtactgtaccccgaggaacccagcggaccccatcgcg
caggtgcaccaggccttctgcaagcacctgctcgagcgagccgtggatgccctggtgaag
ccccaggccgagaaggggcgagcagagtcggacgaggagatgtgtgagttgtccagcgcc
ctggagtacctgaagttgctgaattcctttgtggattccgtgggggtcacggccccccct
ttcacaaacagctcagtgttgaagtcagcactgggcccagacgtcacctgtcggtggtgg
gcctccgccgtcgggatggccatcggctggctccaaggcgatgacgcggccgtgcggtca
cagttcaccgaggtggagcggatccccaaggccctggagatggccgagagcccccttgtg
aaggccgtcttccacacctgccgggccatgcacgcctccctcccggggaaggccgagatc
cagcagagctcctttggtcactgcgagagggccagcgggcacctctggggcagcctgaac
gtcagcggcacagcctccgacgcggggctcacccacgtggtccagctgctcacctgtgac
ctgctgttgtccctgcgcactgccctgtggcagaagcaggcgggctccaaccccgccctg
ggggagacctgccacgcctccgcccccgagctggcgggcttccagagggacctgggcagc
ctgcgcaggctggcgcacaacttccggccagcctatcggaaagtgttcctgcacgaggcc
acggtgcgcctgatggcgggggccagccccacgcgcacccaccagctgctggagcacagc
ctgcggcgccgctctgcccagagcagcaagcacggagagctggagaccctgcccgggcag
agggaacgggccaccgccatcctgctggcctgccgccacctgccgctgtccttcctctcg
tcccctggccagcgtgccgtgctgctggctgaagccgcccgcaccctggagaaggtgggg
gacaagcgttcctgcagcgactgccagcagatgatcgtcaagctgagcgggggcacggcc
atcgcggcctcctaa
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