Sarcophilus harrisii (Tasmanian devil): 100925173
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Entry
100925173 CDS
T02286
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100925173 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100925173 (MID1)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100925173 (MID1)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100925173 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
TRIM_CC
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100925173
NCBI-ProteinID:
XP_003765635
Ensembl:
ENSSHAG00000014062
UniProt:
G3WM73
LinkDB
All DBs
Position
3:203196951..203390037
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNTMTSSEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNSPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWVLCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHL
DCLEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattggagtcggaactgacctgccctatctgtctggagctatttgaagaccca
ttactgctgccctgtgcccatagcctctgtttcaactgtgcacatcgaatcctagtctcc
cactgcgccaccaacgaatctgtggaatccatcactgccttccagtgccctacttgccgt
tatgtcatcaccctcagccagagaggtctagagggactcaagcgtaacgtcaccctgcaa
aacattatcgacaggtttcagaaggcttctgtgagtgggccaaattctcccagtgagacc
cgccgagagcgggccttcgatagcaacaccatgacctccagcgagaaagttctctgtcaa
ttctgtgaccaggaccctgcccaggatgctgtgaaaacctgtgtcacttgtgaagtgtcc
tactgtgaggagtgcctgaaagcaactcacccgaataagaagcccttcacaggccaccgt
ctcattgaaccgataccagattcccacatcagaggactgatgtgtctggagcatgaggat
gagaaggtgaatatgtactgtgtgacggatgaccaactaatctgtgccttatgtaaactg
gttgggcgacaccgagatcatcaagtggcggctttgagtgagcgctatgacaagttaaag
caaaacttagaaagtaacctcaccaaccttattaagaggaatactgaactggaaacactt
ttggcaaaactcattcaaacttgtcagcatgttgaggtcaatgcatcacgacaagaaacc
aaactgatggaagaatgtgacctactcattgaaatcatccaacagagacgccaaattatt
ggaaccaaaatcaaagaagggaaggtggtaagacttcgaaaactggcccagcagattgca
aactgcaagcagtgcattgaacgctctacatcacttatctcccaagctgaacagtccctg
aaggagaatgaccatgccagattcttacagacagcaaaaaatatcactgaaagggtctct
atggcaactgcatcctctcaggtcctaattcctgaaattaacctcaatgacacttttgat
accttcgcattagatttttccagagagaagaaattactagaatgtctggattaccttaca
gctcccaactctccaacaattagagaagagctctgtacagcttcgtacgacaccatcact
gtgcactggacctctgatgatgaatttagtgtggtttcatatgagcttcagtatactatc
tttactggacaagctaatgttgttagtttgtgtaactccgccgacagctggatgattgtg
cccaacatcaagcaaaatcactacacagttcacgggctccagagcggcaccaagtacatc
ttcatcgtcaaagctataaatcaggctggcagtcgtaacagtgaacccggcaagctgaag
acaaacagtcagccatttaaattggaccccaaatctgcccatcgaaaactaaaggtttcc
catgacaacttgacagtggaacgtgatgaaacatcatctaaaaaaagtcacacacctgag
cgcttcactagccaaggaagctatggcgtagcaggcaatgtgttcattgatagtgggcgc
cattattgggaagtagtcataagtggaagtacatggtatgcaattggtcttgcttacaag
tcagccccaaagcacgagtggattggaaagaattctgcttcttgggtgctctgccgctgc
aataataattgggtggtgagacataatagcaaggaaattcccatcgaaccagcacctcac
ctccggcgtgtgggcattttgctagactatgataatggctccatcgccttttatgatgct
ttgaactcccttcacctttatacatttgacattacatttgcacagccggtatgtcctacc
ttcactgtgtggaataaatgtttgacaattataacaggccttcccatcccagaccacttg
gactgccttgagcagctggcctga
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