Sarcophilus harrisii (Tasmanian devil): 100925212
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Entry
100925212 CDS
T02286
Symbol
GPC4
Name
(RefSeq) LOW QUALITY PROTEIN: glypican-4
KO
K08110
glypican 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100925212 (GPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shr00535
]
100925212 (GPC4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
shr00537
]
100925212 (GPC4)
Proteoglycans [BR:
shr00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
100925212 (GPC4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
shr00537
]
Others
100925212 (GPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
100925212
NCBI-ProteinID:
XP_031800781
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Position
X:complement(37065885..37199276)
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AA seq
559 aa
AA seq
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MARLPLPSLLCXLAALSLSLLAAELKSKSCLEVLQVYVSKGFNKNDAPSNEINGDHLKIC
AQGYTCCSQEMEEKYRQQSKEDFRSAVGEHCNALQNMFASRYKKFDEFFKELLENAEKSL
NDMFVRTYGRLYMQNSELFKDLFVELKRYYVGGNVNLEEMLNDFWARLLERMFRLVNPQH
HFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVINKVSVVNP
TPSCSHALLKMTYCSHCRGLVTVKPCSNYCSNVMRGCLANQGDLDSEWNNFIDAMLMVAE
RLEGPFNIESVMDPIDVKISDAIMNMQENSVQVSQKVFQGCGLPKALPAGRASRSVPESG
FSARFRPYNPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSTMCNDEKMAPEHISE
DECWNGNAKSRYLLAVTGNGLANQGNNPEVEVDITKPDMVIRRQIMSLQIMTSKMKNAYN
GNDVDFIDISDESSGEGSGSGCEYQHCPSEFEFNVTDSVGKTVVHGKNAGEKSAASTVCW
SRAAQALCLLFLAVQRQWR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcccggctgcccctcccgtcgctgctctgcnngctggccgccctcagcctcagcctc
ctggccgccgagctcaaatccaaaagttgcctggaagtgcttcaggtctacgtctccaag
ggcttcaacaaaaacgatgcgcccagtaacgagatcaacggcgatcatctgaaaatctgt
gctcaaggttatacatgctgctctcaagaaatggaagaaaagtatcgacagcagagcaaa
gaggatttccgtagtgctgttggggagcattgcaacgctcttcagaacatgttcgcttcc
cggtacaagaaatttgatgaattcttcaaagagctacttgaaaacgctgagaaatccttg
aatgacatgtttgtgcgaacctacggtcgcttgtacatgcagaattctgagctctttaaa
gatctcttcgtggaattgaagcggtactacgtcgggggcaatgtgaacctggaagaaatg
ctcaacgacttctgggcccgccttctggagcgcatgtttcgccttgtgaatccccagcac
cattttacagatgagtacttagagtgtgtgagcaagtacacagaacagctgaagcccttt
ggggacgtgccacggaaactcaagttacaggtgacccgggcctttgtcgccgcccgaaca
tttgcccaaggtctggccgtcgcaagagacgtgatcaacaaagtgtctgtggtcaatccc
acaccttcctgttcacatgccctcctgaaaatgacctactgttcccactgccgtggcctg
gtgaccgtgaagccttgctctaactactgttccaacgtcatgagaggctgtttggccaac
caaggagatctggattcggagtggaacaatttcatagatgctatgctgatggtagcagag
agactcgaggggccctttaacatcgagtcggtcatggatcccattgatgtgaagatatcc
gatgcaattatgaacatgcaggaaaatagcgtgcaggtgtctcagaaggtcttccaaggc
tgtggacttcccaaggccctcccagcaggccgagcctctcgttccgttcccgagagcggc
ttcagcgcccggtttcggccatacaatccagaggaacgaccaacgacggctgccggcacg
agcctggacagactggttacagatgtgaaggagaagttaaagcaggccaaaaaattctgg
tcttccctcccgagcaccatgtgtaatgatgagaagatggcacccgagcatatcagtgag
gacgagtgctggaatggaaatgcaaagagcaggtatctcttagcagtgactggaaacgga
ttagccaatcagggaaataatcccgaggttgaagtcgacatcaccaagccagacatggtg
atccgccgccaaatcatgtccctccagataatgaccagcaaaatgaagaacgcctacaac
ggcaatgacgtggacttcatcgatatcagtgatgaaagcagtggggaaggcagtggtagc
ggctgtgaatatcagcattgcccttcagagtttgagttcaacgtgaccgacagtgtgggg
aaaacggtggttcatggtaaaaatgcgggcgaaaagtcggccgccagtaccgtttgctgg
tctcgtgctgcccaggccctttgcctcttgttcttggctgtgcaaagacaatggagataa
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