Sarcophilus harrisii (Tasmanian devil): 100925398
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Entry
100925398 CDS
T02286
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100925398 (OTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100925398 (OTX1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100925398 (OTX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
100925398
NCBI-ProteinID:
XP_003758287
Ensembl:
ENSSHAG00000011389
UniProt:
G3WD18
LinkDB
All DBs
Position
2:106717176..106724951
Genome browser
AA seq
360 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGAKSRPTKKKSSPARESSG
SESSGQFTPPAVSSSASSSSSASNSSGNPAAAVAAAALGGNPAAVAAAAAASSLSTPAAS
SIWSPASISPGSGPSSVSVPEPLPAPSNTSCMQRSVAAGAASAAAASYPMSYGQGGGYSQ
GYPAPSSSYFGGVDCSSYLAPMHSHHHPHQLSPMTPSSMSGHHHHHHPHHPLSQSSSHHH
HHHHHHHQGYGSTGLAFNSSECLDYKEPGATAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccctacggcatgaatgggctgggcctggcagggcca
gccatggatctgctgcatccctcagtgggatatcccgccactcctcggaagcagcgtcga
gaacgaactaccttcacacgttcacagctggatgtattggaggcactttttgccaagact
cgatacccagatattttcatgagggaagaggtggcccttaagatcaacttacctgagtcc
agagtccaggtatggttcaaaaaccggcgagctaaatgccgacagcagcaacagagtgga
agtggagccaaaagccggcccaccaagaaaaagtcttcacctgctcgagagagctcaggc
tcggaaagcagcggccagttcacaccacctgctgtgtctagttcggcctcatcctctagc
tcggcttctaattcatctggaaaccctgcagcagcagtagcagcagcagccctgggagga
aaccctgcagcagtggccgcagcagctgcagcttcgtctctgagcacccctgctgcctcc
tccatctggagccctgcctcgatctccccaggctcaggtccgtcgtccgtctctgttcca
gagcctttgccagcacccagcaatacatcctgcatgcaacgctctgtggccgcaggagct
gcttcagccgcagctgcttcctatcccatgtcctacggtcaaggcggtggctacagccag
ggttaccctgcaccttcctcttcttacttcggtggtgtagactgtagctcctatctggca
ccgatgcactcccaccatcacccgcatcagctcagccccatgaccccctcctccatgtct
ggtcatcaccaccaccaccaccctcaccacccattaagccagtcttccagtcatcaccat
caccaccaccatcaccatcatcaggggtatggcagcacggggcttgcctttaactcctca
gaatgcctcgattacaaggagcctggagccactgcagcctcttccgcctggaaactcaac
ttcaattcacccgactgtctggactataaagaccaggcctcttggaggttccaggtcttg
tga
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integrated database retrieval system
