Sarcophilus harrisii (Tasmanian devil): 100925420
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Entry
100925420 CDS
T02286
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X2
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shr03037
]
100925420 (USHBP1)
Cilium and associated proteins [BR:
shr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100925420 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Abhydrolase_8
Motif
Other DBs
NCBI-GeneID:
100925420
NCBI-ProteinID:
XP_023354525
Ensembl:
ENSSHAG00000001406
LinkDB
All DBs
Position
1:complement(661772640..661790590)
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AA seq
692 aa
AA seq
DB search
MSSRATRPRSRRGRAPPPGELDPVVESTEEAEAAGSSAGPEVPRLPPEESRTEHPVTLAE
QSNEGARPQLEEHRDGQISSEPSSHLTSGKLPHSPPSQFHQPSGEDAQEGPNLYLALQQA
VESLEKAAASCRQQASSLPASTPPGPGEPGKADEEKSWPLQRLEELVRSWGPIGQEEGIP
EQERVGYKQEALSLAEQNASLRGSLKSKEEELAQDQASLQALQDEKEKLQRQVWELHESL
LKLDLSPQPPLSQESSMSRSSSPGPDGELWRAQQLQNIASPGTPAPLTPELQDLDAQMEQ
LRRTIQRLKCFNQMMLGALQSCKGHSEGLSMQLGQREAETTALRLALQYSDQCVEAYGVL
LDLRTVDTRPGPGPRAREGRTESAMAEAQRLLSEEDPAEAGLLARVYVSPEGSSVDAPTE
LEVAALLQGYIGRLRAHQALVKVPPEPAPRPGPGPSVLREEAIFQAMLGTQPNLELPRLE
KTEIQQELATMREALADLTLKLQLVKKEKRALELRDAAHRAQGTLYLLLLEQLRWQLGQG
RPHDALRSESSDSDSDSSCGAWAPGDGDQTTWLGGPRDSEDMLQELTNSLTRAQELQGQL
GKLQASLEQMAQDERTQRAQCLELTNDFCKAHSALVLAFRGVQRKQEQQQQTLEQQIAQM
AAQQEEELESLTQAAQALEDAGILLPWGETSL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgagctactaggccccgcagtcggagggggagagcgccgccccccggggag
ctggaccctgtggtggagagcaccgaggaggcagaagcggcgggaagcagtgctggacca
gaggtccccaggctgcccccggaggagtcacgcacagagcacccggtcacccttgcagag
cagagcaacgaaggagcccgtccacagctggaggaacacagggatgggcagatttcctca
gagcctagcagccatctgacttctggaaagctgccccactcacccccttctcagttccac
cagccctcaggagaggatgcccaggaaggccccaacctgtacctggccctgcagcaggcg
gttgaatccttggagaaggcagcagcctcatgtcgccaacaagcctccagcctccctgcc
tcaaccccaccaggtccaggagagcctggcaaggctgatgaggagaaatcatggccgcta
caaaggctggaggagctggtcaggagctggggccccatcggccaagaggaggggatccct
gagcaggagagggtcggctacaaacaggaggccctgagcctggctgagcagaatgccagc
ctccggggctctctaaaaagcaaggaagaggagttggcccaggatcaggcctccttacag
gccctccaggacgaaaaggagaagctccagagacaggtctgggagcttcacgaatctctc
ctgaagctggacttatctcctcagcccccccttagccaggagagctccatgagcagatcc
agcagcccggggccagatggggagctctggagggcccagcagctacaaaatatcgccagt
cctgggacccctgcacccctcacaccagagctgcaggacctggacgcccaaatggagcag
ctccggaggactatccagaggctcaaatgcttcaaccagatgatgctgggggccctgcag
tcctgcaagggccactcggaggggctgagcatgcagctgggacagagggaggccgagact
actgccctgcgcctagccctgcaatacagtgatcagtgcgtggaggcctatggggtgctg
ctggacctgcggacagtggacacgaggcccgggccaggcccacgggccagagaaggcagg
acggagtcagccatggcagaggcgcagcggcttttgtctgaggaggatcctgcagaggct
ggcctcctggctcgtgtctatgtaagccctgagggcagcagtgtagatgcacccacagaa
ctggaggtagcagcactcctacagggttatattgggaggctccgggcacaccaggccctg
gtgaaggtgccccccgagccagcccccagaccaggccccgggcccagtgtgcttcgggag
gaagccatcttccaggcgatgctggggactcagcctaacctggagctgccgcggctggaa
aaaacggagatccagcaggagctggccaccatgagggaggctctggcagacctgacactg
aagctgcagctggtgaagaaggagaagcgggcactggagctaagagatgcggcccaccgg
gcacagggcactctctacctcctgctcctggagcagcttcggtggcagctgggccaaggc
agaccccacgatgccctccgctcggagagcagtgacagtgacagtgacagcagctgtgga
gcgtgggctcccggagatggggaccagaccacctggctagggggaccacgggactcagag
gacatgctgcaggaacttaccaattccctgactcgggcccaagagctgcaaggacagctg
gggaagctacaagcttcactggaacagatggctcaggatgagcggacccagagagcccag
tgtttggagcttaccaatgacttctgcaaggcccatagtgccctggtgctggccttccgg
ggagtccagcggaagcaggagcagcagcagcagaccctggagcagcagatagcacagatg
gcagcccagcaggaggaagaactggaatccctgacccaagccgcccaggctctggaggat
gccggaatcctcctgccctggggagagacttctctgtag
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