KEGG   Sarcophilus harrisii (Tasmanian devil): 100925521
Entry
100925521         CDS       T02286                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:shr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:shr01009]
    100925521 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:shr03036]
    100925521 (KDM5B)
Enzymes [BR:shr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     100925521 (KDM5B)
Protein phosphatases and associated proteins [BR:shr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100925521 (KDM5B)
Chromosome and associated proteins [BR:shr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100925521 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN
Other DBs
NCBI-GeneID: 100925521
NCBI-ProteinID: XP_031793011
UniProt: A0A7N4P8P9
LinkDB
Position
4:complement(96074304..96138560)
AA seq 1711 aa
MTGAPPPPPPQQPPTPSSCGPALLGRKEAGSLSSLGEVGMPWDSFLSPWRRKRTAVRRRT
GDDGGSGGGGGVVVVVVGGVGGGFSRAGGAAAAAACWDRRRRCRCRCCCCCPRVALAGGR
ARRCRPDPGPRRPAAPGPAPPPPMESAVAPPPAGPRPAPPGVAAAAGPGPLGEFLPPPEC
PVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPAWQPPFACDVDKLHFTPRIQRLNE
LEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGGFDVVCKERKW
TKIATKMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLAPDICSKLMCLVDHGVLEKC
LQKPNLTTDTKDKEYKPHDIPQRQSVQPVETCPPARRAKRMRAEAANIKTEPGEAPEART
HNLRRRMGCPTPKCENEKEIRSTIKREIIEKKEHTGESEKEKPKSRSKKSTNAVDLYVCL
LCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECNKPQEAFGFEQA
ARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKE
FGSGFPVRDGKIKLSPGEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCF
SSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFVSQPDLLHQLV
TIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQ
CVEHYRLLNRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKILRETVRKLG
VIDSERMDFELLPDDERQCIKCKTTCFMSGVSCSCKPGLLVCLHHVEDLCSCPAYKYKLG
YRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINNKKSLINFKALIEESEIKKFPD
NDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRLFVKQLYALP
CILSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQELLDVSFEFDVELPQLSEMRIR
LEQARWLEEVHRACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDD
KARSLIKARPRHSLNSLAAAVKEIEEIPAYLPNGLALKDAVQKARDWLQEVEVLQAGGRV
PVLDTLMELVSRGRSIPVHLNSLPRLESLVAEVQSWKECAANTFLMENSPYSLLEVLCPR
CDVGTMGLKRKQRKLKEPIPSGKKRSTRLESLSDLERALTESKETASAMATLGEARLKEM
EALQSLRAANEGKLLSPNQDSEIKICLCQKSPAAPMIQCELCRDAFHTGCVAVPSILQGP
RVWLCPYCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLASG
SLKLVLDRAGSGLLYSRWQASTGQVPETNKVSQTIGAMSFSLPHDWDNRSSYLHSPFSTG
RSCIPLHGISPEVDELLTEAQLLQVSLPEIQEIYQTLLTKPSPTQHPDRGSPVGLTNEKN
DCCRGKRDGIGNLERKLKRRLEREGLSVERRERIKKTRTPKKKKIKLSHSKDMNNLKQEK
ERSYELARPTETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQCDGSCNQWF
HQVCVGVSPEMAEKEDYICVRCTVKDAPNRK
NT seq 5136 nt   +upstreamnt  +downstreamnt
atgacaggcgcgccccctccccctcccccgcaacagccgcccactccatcctcctgtggc
cccgcccttctgggacggaaggaggcggggtcgctcagctcattgggggaggtggggatg
ccgtgggactcctttctctctccgtggcggcggaagcgcacggcggttaggcgcagaacc
ggcgacgacggcggcagcggcggcggcggtggcgtcgtcgtcgtagtcgtcggcggcgtc
ggaggcggctttagccgagccggaggtgctgctgctgctgctgcgtgctgggatcggcgt
cgccggtgtcgctgccgctgctgctgctgctgcccgagggtcgcgctcgccggcggtcgc
gcccgtcgctgccgtcccgatcccgggccccggcgccccgccgcccccggccccgcgccg
cccccgccgatggagtcggccgtggcgccgcccccggcgggcccccgaccggcgcctccc
ggcgtcgccgccgccgccggcccgggcccgctgggcgagttcttgcccccgcccgagtgc
ccggtgttcgagccgagctgggaggagttcgccgacccgttcgccttcatccacaagatc
cggcccatcgccgagcagactggcatctgcaaggtgcggccgcccccggcttggcaacca
ccatttgcgtgtgatgttgataaacttcattttactcctcgaatccagagactgaatgaa
ttggaggctcaaactcgagtaaaactgaattttttggaccagattgcaaagttttgggag
ctccaaggatgtactttaaaaattccacatgtggaaaggaaaatattggatttatttcag
cttaataggttagttgcagaagaaggtggatttgatgttgtctgcaaagagagaaaatgg
accaaaattgccaccaagatgggatttgctccaggcaaagctgtgggttcacacattcga
gcacattatgagcgcattctttacccctacaacctattccagtctggagctagtctgctg
gcacctgacatatgttccaaactgatgtgtttagtggatcatggcgttctggaaaagtgt
ctgcagaagccaaatctcaccacagatacaaaggacaaggaatataaaccccatgatatt
ccccagagacagtcagttcagcctgtggaaacatgtcccccagcacgtcgtgcaaaacgc
atgagagcagaggctgctaatattaaaacagaacctggagaggctccagaagccagaact
cataatctgagacgtcgaatgggttgtccaacaccaaagtgtgaaaatgagaaagagatt
cggagcacaataaaaagagagatcattgagaagaaagagcatactggggaaagtgagaag
gagaaacctaagagtcggtctaagaaaagcacaaatgctgtggatctatatgtctgcctc
ttgtgtggcagtggcaatgatgaggatcgccttcttttgtgtgatggctgtgatgatagc
taccatactttctgcttgattccacctcttcatgatgttcccaagggagactggaggtgc
cctaaatgtttggctcaggaatgtaataagcctcaggaagcatttggttttgaacaggca
gccagagactacacacttcgcacttttggggaaatggcagatgcattcaagtcagactat
ttcaacatgcctgtccatatggttcccacagagctggtggagaaagaattttggcgtctg
gtaagcaccattgaagaggatgtcacagtggagtatggtgctgatatcgcctctaaagaa
tttggcagtggttttcctgttcgagatggaaaaataaaactctccccaggggaggaggaa
tatcttgatagtggctggaatttgaacaacatgcctgtaatggagcaatctgtccttgct
catattactgctgatatatgtggcatgaagctaccctggctgtatgtgggaatgtgtttt
tcttcattttgttggcacattgaagaccattggagctattcaattaattatctgcactgg
ggggagccaaaaacgtggtatggagccccaggttatgcagcagagcaactggaagatgta
atgaagaaactggctccagagctctttgtgtcccagccagatctcctccaccagcttgtc
accattatgaacccaaataccctaatggctcacggtgtgcctgtttaccgaactaatcag
tgtgctggcgagtttgtgattacctttccaagagcctatcacagtggttttaaccagggc
ttcaattttgctgaagcagttaatttctgcactgttgattggcttccattaggacgtcag
tgtgtggagcattatcggttgctgaaccgatattgtgtattttctcatgatgagatgatt
tgtaaaatggcctccaaagctgatgtattagatgtggtcgttgcttcaactgttcagaaa
gatatggccattatgattgaagatgaaaagatcttaagggagactgttcgcaagttggga
gtaatcgattcagaacgaatggattttgaactgttgccagatgatgaacgccagtgcata
aaatgcaagacaacatgtttcatgtctggggtgtcctgttcttgtaaacctgggctgctg
gtgtgtctccatcatgtagaagatttgtgttcttgtcctgcctataagtataagctgggg
tacagatatactctggatgacctatatcctatgatgaatgccctgaaactccgagcagaa
tcgtataatgaatgggcattgaatgtgaatgaagctttggaagccaagatcaacaacaaa
aaaagcctcatcaactttaaggctctgatagaagaatctgaaataaagaaatttcctgac
aatgatcttttgcgccatcttcgcttagtcacacaggatgctgataagtgtgcatctgtg
gcacagcagctactcaatggcaaaaggcagactaggtaccgttctggtggagggaaatcc
cagaatcagttgaccgtcaatgagcttcgactttttgtgaaacaactatatgctcttccg
tgcattctcagtcaaacaccgctcctgaaggatctcttgaatagggtggaagatttccaa
cagcacagccagaaactactatcagaagaaatgcccagtgctgctgagctgcaggagttg
ttggatgtcagctttgaatttgatgttgagcttccacagctttctgagatgcgtatccgt
ctggaacaggcccgctggctagaagaagttcaccgagcttgtttagatcccagctccctc
accctggatgatatgagacgtctcattgatttgggagtgggattggccccatactcagca
gtggagaaggccatggcgaggctacaggagctgcttactgtgtcagaacattgggatgac
aaagccaggagcctcatcaaggccagaccacgacactcattaaacagccttgcagcagca
gtcaaggaaattgaggaaattccagcatacctcccaaatggccttgctctgaaagatgcc
gtacagaaagccagagactggcttcaggaagtagaagtccttcaggctggaggccgagta
ccagtgttagatacactaatggagcttgtttcaagaggccgatctatccctgtgcatctg
aattctttgccaagactagaatccctagtggctgaggttcagtcttggaaagaatgtgca
gccaatacttttctgatggaaaattctccatactcactcttagaggttctttgtccccgg
tgtgatgtgggcactatgggactgaagagaaagcagagaaagttgaaagaacctattcca
agtggaaagaagagaagcacaagactggaaagcctgagtgaccttgaaagagctttgact
gaaagtaaagaaacggcttcagcgatggcaacacttggtgaagctcggctaaaggaaatg
gaagccttacagtccctgagagcagctaatgaagggaaactactgtcacccaaccaagac
tcagaaatcaaaatctgcttatgtcagaaatccccggctgcacctatgattcagtgtgaa
ctctgccgagatgccttccacacgggctgtgtggctgtgcccagcatcttgcaaggtccc
cgcgtctggctgtgtccctattgtcgaagatctgagaaacccccattagagaaaattctg
ccccttttggcctcccttcaacgcatccgtgttcgccttcctgaaggagatgctcttcgg
tatatgattgaaagaaccgtgaactggcagcatagagcacagcagatgcttgcttcaggg
agcctaaaattggtactagaccgagcggggtcaggactattgtacagcagatggcaggcc
tcaacaggccaggtgccagagacaaataaggtttcacagacaattggtgcaatgtccttt
tctctgccccatgactgggacaacagatcctcctacttacactctcccttttcaactgga
cgaagttgcatccccctccatggtatcagtcctgaagtggatgaattgctaacagaagcc
cagttactccaggtatctctgcctgagattcaagaaatctaccagactttactcaccaag
cctagcccaactcagcatcctgatcgagggtcacctgttggactcaccaatgagaagaat
gactgctgccgggggaagcgagatggaattggaaatcttgagagaaaattgaagagacga
ctggaaagagagggtttgtctgttgagcgaagggagcgaattaaaaaaacgcggacccct
aaaaagaagaaaatcaaactgagccactccaaggacatgaacaatctcaagcaagagaaa
gaacggagctatgaattggcccgtcccactgaaactcactccctgccctcagacacatcc
tactcggaacaagaggactctgaggatgaagatgctatctgcccggccgtgagctgccta
cagccagaaggagatgaggtggactgggtccagtgtgatggcagctgcaatcagtggttt
catcaggtctgtgttggtgtttctcccgagatggcagagaaggaagactacatctgtgtg
cgctgtactgtgaaggacgcaccgaaccgaaagtaa

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