Sarcophilus harrisii (Tasmanian devil): 100925562
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Entry
100925562 CDS
T02286
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04151
PI3K-Akt signaling pathway
shr04510
Focal adhesion
shr04512
ECM-receptor interaction
shr05165
Human papillomavirus infection
shr05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100925562 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100925562 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100925562 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100925562 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100925562 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shr00536
]
100925562 (TNC)
Glycosaminoglycan binding proteins [BR:
shr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100925562 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Fn3_VIN3
DUF7949
EGF
NDNF
Interfer-bind
DUF4998
hEGF
fn3_2
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
100925562
NCBI-ProteinID:
XP_031810042
Ensembl:
ENSSHAG00000009497
LinkDB
All DBs
Position
2:complement(436816037..436925803)
Genome browser
AA seq
2286 aa
AA seq
DB search
MGALTQVLSYTIVALLCYPTQAGVLKRVIRHKRQSGINATLPEENHPVIFNHVYNIKMPV
GSQCSVDLEPTSGEKELNPPTELGENFQEHTLNEENQIIFTHRINIPRRACGCAPAADIK
DLLNRLEELEGLVSSLREQCTSGAGCCPQPAEGRLDTAPFCSGRGNYSTDSCGCICEPGW
KGPNCSEPECPGNCNNKGQCIDGQCVCDEGFFGEDCGQLACPSDCNDQGKCVHGACVCFK
GYTGEDCSEELCPVPCSEHGKCTNGQCICDEGFAGDDCNEPLCLNNCYNRGRCVENECVC
NEGFTGEDCSELICPNDCYDRGRCVNGTCYCESGFTGEDCGQLTCPNDCHNQGRCEEGQC
VCEEGFAGEDCSERQCPEDCHNHGRCIDGQCECDDGFAGVDCGELQCPRDCSKHGRCVNG
QCVCDEGYTGEDCASRRCPSDCNSRGRCVLGKCVCEQGFTGQDCGDMSCPNDCHHQGRCV
NGMCVCNDGFMGEDCRDLRCPKDCSSRGVCVAGRCECQEGFAGEACGELACLNSCSNQGR
CVNGQCVCSEGFMGRDCSTLRCPHDCTNQGRCVDGKCICHKGFAGDDCSQLSCPNNCNDQ
GQCVGGRCICNQGYTGEDCAEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIIYTPTNS
DGLEMQFRVPGDQTSTIIRELEPGVEYFIRVFAILENKKSIPVSARVATYLPAPEGLRFK
AIKETSVEVEWDPLDIAFENWEIIFRNMNKDDGGEITNSLRRPETTYRQTGLAPGQEYEI
SLHIVKNNTRGPGLKKITTTRLDAPSQIDVKDITDTTALISWSKPLAEIDGIELSYGIKD
APGDRTTIDLTHDDNQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFVTGLDAPRNLKR
ISQTDNSITLEWKNGKANIDKYRIKFAPISGGDHAEVEVSKSKQATTKTTLTGLRPGTEY
GIGVSAVKDDKESNPATINAATDIDAPKDLQISEPTETTLPLLWSRPVAKFERYRLTYSS
STGQHKEVQLPADTTSYVLRDLNPGTEYAIQLVVEKGRHKSKPARVKGSTEEEPEFANLT
VTDVSWDALKLNWMAADGAYDSFVIQVQEANKLEEVQNLTVSGSLRTVNITGLQAATPYR
ITIYGVIQTYRTHPLSAETSTEETPKLAELTVTEVSWDSLRLNWTTTDGDYENFVIQVQE
ANRNLNIPGELRSVHVTGLTPATLYRITIHGVIRGFSTHPLSIQAITEEVPKLGNLTVAK
VSWDSLKLNWTAADGAYEIFVIKVQESNNLEETQNLTVSGKLQSADILGLQAETPYTITL
YGVSRNFTTEPLSAEATTEEAPKLRSLTVSEITWNAFTLNWTMVNGPYKNVVIWVQEVNH
PEEMHNLTVASVLNSMQVTGLKPATPYKITITGVIRDYHTEPLSAEASTEELPKLGELTV
TNVSWDALRLNWTTTEEAYDSFVIQVQEANKLEEVQNLTVSGSLRTVDITGLQAATPYRI
TIYGVIQNYRTSSLSAEAYTVAEPLLSHLTVSDITSGSVSLSWKAQEAVFDNFILEVRNS
DLPLDSVVYTVPGALRSSVITDLRASTNYTVQLHGLIDGQNGQTLMAQATTEALPLLESL
TISDINPHGFTVSWMALENAFDSFLVIVVDSGKLLDPQEFTLSGTQRKLELKGLITGIGY
EVMLFGLAQGHQTKPLSAVVFTEAEPEVDNLLVSDATPDGFRLSWTADEGVFNSFVLKIR
DTKKQADPLEIIIPAHERTRDITGLKEGTAYDIELYGLISGRRSQPINAIATTAMGSPKE
ISFSDITENSATVSWTAPTSQVESFRITYVPVSGGTPSVITVDGSKTQTGLVRLMPGVEY
LVSIISIKGFEESEPVTGTLTTALDGPSGLMAANITDSEALAMWQPAIATVDSYVISYTG
DKVPEVTQTVSGNTVEYALNDLEPATEYTLRIFAEKGPQKSSIITTRFTTDLDSPRDLMA
TEVQSETALLKWRAPRAPITGYLLIYESVDGTIKEVILGPDTDTYTLTELSPSTHYTAKI
QALKGALRSKLIQTIFTTIGLLYPYPKDCSQTMLNGETASGLYTIYLNGDKAQPLNVFCD
MTSDGGGWIVFLRRSNGHQDFYQNWRTYATGFGKLEDEFWLGLDNIHKITDQGQYELRVD
LQDNGETAYAIYDRFSVGDAKSRYKLKVDGYSGTAGDSMAYHNGRSFSTYDKDTDSAITN
CALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLRPSNFRNLE
GRRKRA
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctgacccaggtgctgtcctatacaattgtagctctgttatgctaccctacc
caagcaggggttcttaagagagtgatccgccacaaacggcagagtggcatcaatgccaca
ttgccagaagagaaccacccagtcatctttaatcatgtctacaacattaagatgcctgtg
ggttcccaatgctcagtagacctagaaccaaccagtggggagaaagaactgaaccctccc
actgagctgggagaaaacttccaagaacacacactaaatgaggagaatcagatcatcttc
acacatcgaatcaatattccccggcgagcatgtggctgtgcaccagctgcagacatcaag
gacctactaaatcggctagaggagctagagggactagtgtcctccctgcgggagcaatgt
accagtggggctggctgctgtccccaacctgctgaaggccgtctggacacagcacccttc
tgtagtggtcgagggaactacagcactgatagctgtggctgcatatgtgaaccaggttgg
aaaggacccaactgttctgaaccagaatgcccaggaaattgcaacaacaagggtcagtgc
atcgatggacagtgtgtttgtgatgagggattttttggcgaggactgtggccagttggcc
tgtcccagtgactgcaacgaccaaggcaagtgcgtccacggcgcatgtgtctgtttcaag
gggtataccggggaggactgcagtgaggaactctgccccgtaccctgcagtgagcatggc
aaatgcacgaacgggcaatgcatttgtgatgagggttttgctggcgacgactgcaacgag
cctctgtgccttaacaactgctacaaccgcgggcgctgtgtggagaatgagtgtgtgtgt
aacgagggtttcactggtgaggattgtagtgagctgatatgccccaatgactgctatgac
cggggccgctgtgtcaatgggacctgctactgtgagtcgggcttcacaggagaagactgt
gggcagcttacctgccccaatgactgccacaaccagggccggtgtgaggaagggcagtgc
gtttgtgaggagggctttgctggtgaggactgtagcgaaaggcagtgccctgaggactgc
cacaaccatgggcgctgcattgacgggcagtgcgagtgtgatgacgggtttgcgggagtg
gactgtggagagctccagtgtcctcgggattgcagcaagcacggccgctgtgtaaacggg
cagtgcgtgtgtgatgagggctacactggggaggactgtgccagtcgccggtgccccagt
gactgcaacagccgtgggcgctgcgtccttggcaagtgcgtttgtgagcagggcttcacc
ggccaggattgcggagacatgagctgccccaacgattgtcaccatcaggggcgctgtgtg
aatgggatgtgcgtgtgcaatgacggcttcatgggggaagactgccgcgacctgcggtgc
cccaaagactgcagcagccgcggggtgtgtgtggcagggaggtgtgaatgccaggagggc
ttcgctggggaagcctgtggagagttggcttgcttaaacagctgcagtaaccagggccgc
tgtgtgaatggacagtgtgtgtgcagcgaggggttcatggggagagactgcagtacccta
aggtgtccacacgactgtaccaaccaagggcgctgtgtggatggcaagtgcatctgccac
aagggattcgccggagacgactgcagccagctttcctgcccgaacaactgtaacgaccag
ggacagtgcgttggcgggcgttgcatctgtaaccagggctataccggggaggactgcgca
gaggtatctccaccaaaggacctaatagtgactgaagtgacagaagagactgtaaatctg
gcatgggacaatgaaatgagggtcacggagtatctcatcatctacacccccactaactca
gatggcttggaaatgcaattccgtgtccctggagaccagacatccaccatcatccgcgaa
ttagagccaggagtagaatattttatccgagtctttgctatcctggagaacaagaaaagt
attcctgtcagcgcaagagtggctacttacctgcctgccccagaaggcttgagattcaaa
gccatcaaagaaacatcagtggaagtggagtgggatcccctagacattgcttttgaaaac
tgggaaattatcttccgcaacatgaataaagatgatggtggagaaatcactaacagcttg
aggagaccagaaacaacttacagacagactggcctggctccaggacaggagtatgagatt
tctttgcatattgtgaaaaacaacacccgtggtcctggcctgaagaaaataacaaccaca
cgtctggatgctcctagccagatagatgtaaaagatatcacagatactactgctctaatc
agctggtctaaacctttggctgaaattgatggcatcgaactctcatatggtatcaaagat
gctccaggtgacagaacaaccattgatctcactcatgatgacaaccaatactccattgga
aacctgaaacctgatacagaatatgaggtctcccttatctctcgaagaggagacatgtca
agcaacccagctaaagaaacttttgtaacaggtctggatgcccctcgcaatctaaaacgc
atctcccagactgacaatagcatcactttagagtggaagaatggcaaagctaacattgac
aagtatcgtattaagtttgcccccatttctggaggagatcatgcagaagtcgaggtttcc
aagagcaaacaggctacaaccaaaaccacactcacaggtctaagaccaggaactgaatat
ggcattggagtatccgcagtgaaggatgataaggaaagcaatcctgctaccatcaatgca
gccacagatatagatgctccaaaggaccttcagatttcagaacctactgaaaccaccttg
cccctgctctggagccgacctgtggccaagtttgaacgataccgcctgacctatagctct
tccacaggacagcataaagaagtccagttaccagcagataccacctcttatgttctgaga
gatctgaatcctggtactgaatatgccatccaacttgtggttgagaaaggacgacataag
agcaaaccagcccgtgtgaaaggttcaacagaagaagaaccagagttcgcaaaccttacc
gtgacagatgttagctgggatgccctcaaactcaactggatggcagcagatggggcttat
gacagctttgtcattcaggtgcaggaggctaacaaattggaagaggttcagaatcttaca
gtatctggcagtctaagaactgtgaatatcacaggcctccaagctgccaccccctataga
atcaccatctatggggtgattcagacctacagaacacatcccctttctgctgaaacttct
acagaagaaactcctaaactggcagagttaacagtgacagaagttagctgggattctctc
agactcaactggaccaccactgatggggattatgagaactttgtcattcaggtgcaagag
gctaaccggaatcttaacatcccaggagaactgagatctgtgcatgtgactgggctcaca
cctgctaccctttacagaatcaccatccatggagtgattcggggctttagcacacaccct
ctttctattcaagccatcacagaagaggtcccaaaactggggaacctcacagtggccaag
gttagctgggattccctcaaactcaactggacggcagctgatggggcctatgagatcttt
gtcattaaggtgcaggagtctaataatctggaggaaacccagaatctcacagtttctggc
aaacttcagtctgctgatattcttggcctccaggctgaaaccccttacactattactttg
tatggtgtgagcaggaacttcaccactgaacccctttctgctgaagccaccacagaggag
gcacctaagctcagaagcttaacagtttcagaaattacctggaatgccttcacactcaat
tggactatggtaaatgggccctacaagaacgttgtcatttgggtgcaagaagttaatcac
cctgaagaaatgcacaatctcactgtggctagtgtattgaactctatgcaagtgacaggt
ctcaagccagccactccttataaaatcaccatcactggtgtgatcagagactatcacact
gagcccctttcagctgaagcctccacagaggagctccctaaactgggagagttaactgtg
acaaatgttagctgggatgccctcagactcaactggactacaacagaggaagcctatgac
agctttgtcattcaggtgcaggaggctaacaagttggaagaggttcagaatctcacagtg
tccggcagcctgagaactgtggatatcacaggcctccaagctgccactccttatagaatc
accatctatggggtaattcagaactacagaacaagttccctttcagctgaagcttacaca
gtagccgaacctcttcttagccatctcactgtctcagacattacctcgggcagtgtatcc
ctctcgtggaaggctcaggaggctgtctttgataattttattttagaagttaggaattct
gacctccctctggattctgtggtctacacagtgcctggggccttgagaagctctgtaatc
acggaccttagagcttccactaattacactgtccaacttcatgggctgattgacgggcag
aatggtcagaccctgatggcccaggcaaccacagaggccttgcccctactggaaagctta
accatttccgacattaatccccatgggttcacagtttcatggatggcattggagaatgcc
tttgacagctttctagtaatcgtggtggattctggcaagctgctggacccccaggagttc
acactttcaggaacccagaggaaactggagcttaaaggcctcataactggcattggttat
gaggttatgcttttcggcttggcccaagggcaccaaacaaagcccttgagtgctgtggtt
tttacagaagcagagccagaagttgacaaccttctggtttcagatgccaccccagacggt
ttccgtctatcttggacagcagatgaaggggtcttcaacagttttgttcttaaaatcagg
gatactaaaaagcaggctgatccactggaaataatcataccagcccatgagcgtaccagg
gatataacaggtctcaaagagggcacagcatatgatattgaactctatggattaatcagt
ggacggcgatcccagccaatcaatgccattgcaaccacagccatgggatcaccaaaagaa
atctccttctccgacatcactgaaaactctgccactgttagttggacagcacctacttca
caagtggagagtttccggatcacatatgtccctgtttcaggaggaacaccttcagtgata
acagtggatggaagcaagactcagactgggctggtgagattgatgcctggagtggaatat
cttgtcagtatcatttcaatcaagggctttgaggaaagtgagcctgtgacaggaactctt
acaacagctctggatggcccatccggtttgatggcagctaatatcactgactctgaagcc
ctggccatgtggcagccagccatagctactgtggatagttatgtcatctcctacactggg
gacaaagtgccagaagtgactcaaacggtatctgggaacacagtggaatatgctttgaat
gaccttgagcctgcaacagagtacacgctaaggatctttgcagagaaggggccccagaaa
agttccataatcaccactcgtttcacaacagatctagattctccaagagatttgatggca
actgaagttcaatcagaaacggcactgttaaaatggagggcccctcgtgcgcctataact
ggttatctcctcatctatgaatctgtggatggaacaatcaaggaagtcatcttgggacct
gacacagatacttacaccctcacagagctgagcccatccacacattatactgccaagatc
caggccttgaagggagccctgaggagcaaactcattcagactattttcacaacaattgga
ctcctctacccatatcccaaagattgttcacaaacaatgctgaatggagaaacagcttct
ggcctctacactatctatctgaatggggataaagcccaaccactaaatgttttctgtgac
atgacttctgatggaggaggatggattgtatttttgagacgtagtaatggacatcaagat
ttctaccagaattggaggacttatgctactggatttgggaaacttgaagatgaattttgg
cttgggttggataacattcacaaaatcactgaccaaggacagtatgaattaagggtggat
ctccaagataatggtgagacagcttatgccatatatgacagattcagcgttggagatgcc
aagtcccgctataaactgaaggtggatggatacagtggaacagcaggtgattccatggcc
taccacaatgggagatccttctctacatatgacaaggacacagattcggccatcacaaat
tgtgctctgtcctacaaaggagctttctggtataagaattgtcaccgagtaaaccttatg
ggacggtatggtgacaacaatcacagtcagggtgttaactggttccactggaagggccat
gagcattcaatccagtttgctgaaatgaagctaagacctagcaacttccggaacctagaa
ggcagaagaaaaagggcataa
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integrated database retrieval system
