Sarcophilus harrisii (Tasmanian devil): 100925642
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Entry
100925642 CDS
T02286
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X4
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04114
Oocyte meiosis
shr04120
Ubiquitin mediated proteolysis
shr04218
Cellular senescence
shr04310
Wnt signaling pathway
shr04340
Hedgehog signaling pathway
shr04390
Hippo signaling pathway
shr04710
Circadian rhythm
shr05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100925642 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100925642 (BTRC)
04340 Hedgehog signaling pathway
100925642 (BTRC)
04390 Hippo signaling pathway
100925642 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
100925642 (BTRC)
04218 Cellular senescence
100925642 (BTRC)
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100925642 (BTRC)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100925642 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100925642 (BTRC)
03036 Chromosome and associated proteins [BR:
shr03036
]
100925642 (BTRC)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100925642 (BTRC)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100925642 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
F-box
Beta-prop_DCAF12
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_VPS8
F-box_5
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
100925642
NCBI-ProteinID:
XP_003755496
Ensembl:
ENSSHAG00000010653
LinkDB
All DBs
Position
2:557324263..557523252
Genome browser
AA seq
605 aa
AA seq
DB search
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNDEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLASTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGIAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAPAEPPRSPSRTY
TYVSR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacccggccgaggcggtgctgcaggagaaggcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagtatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatgacgagccccctaggaagataataccagagaagaattcacttagacagacctac
aatagctgtgccagactctgcttaaaccaagaaactgtatgtctagcaagtactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacctccagcatgattgtg
cccaagcaaaggaaactctctgcaagttatgagaaagagaaggagttatgcgtcaaatat
tttgaacagtggtcagagtctgaccaggtagaatttgtggaacatctaatatctcagatg
tgtcactaccagcatggacacataaactcatacctcaaacccatgctacaaagagatttc
ataactgccttgccagctcgaggtttagatcacattgctgagaacattttatcatatctg
gatgccaaatcactgtgtgccgctgagcttgtgtgcaaggagtggtatcgagtgacatcg
gatggaatgttatggaagaaactcattgagagaatggtcaggacagactctctatggaga
ggcctggcagaacggagaggatggggacagtatttattcaaaaacaaacctcctgatggg
attgcccctccaaactctttttacagagcactttatcctaaaattatacaggacattgag
acaatagaatctaactggcgttgtggaagacacagtttacagagaattcattgccggagt
gaaactagcaaaggagtttactgtttacaatatgatgatcagaagatagtaagtggcctt
cgagacaacactatcaagatctgggataagaacacgctggagtgcaaacgcatcctcaca
ggacacacaggatcagtcttgtgcctccagtacgacgagagagtgatcataaccgggtct
tctgattccaccgtcagagtttgggatgtaaatacaggtgaaatgttgaacacactgatt
caccattgtgaagcagttcttcatttgcgtttcaataatggaatgatggtgacatgttcc
aaagaccgttccattgctgtatgggatatggcctcccccactgacatcaccctgcgaagg
gtgctggtaggacatcgagctgctgttaatgttgtagactttgatgacaagtacatcgtc
tctgcatcaggagacaggactataaaggtatggaacacgagtacttgtgaatttgttagg
accttaaatggccacaagcgaggtattgcctgtctgcaatacagagataggctagtagtg
agcggctcatctgacaatactatcaggttgtgggacatagaatgtggagcatgtttacga
gtgctagagggccatgaggaactggtgcgctgtattcgatttgataacaagaggatagtc
agtggggcctatgatgggaaaattaaagtatgggatcttgtagctgctctggacccccgt
gctcctgcaggaactctgtgtctgcgaacccttgtggagcattcaggaagagttttccga
ctccagtttgatgaattccagatcgtcagtagttcacatgatgacacaatcctcatctgg
gatttcctaaatgacccagctgccccagctgaaccacctcgatccccttctcgcacatac
acctacgtctccagataa
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