Sarcophilus harrisii (Tasmanian devil): 100925707
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Entry
100925707 CDS
T02286
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03015
mRNA surveillance pathway
shr03040
Spliceosome
shr05014
Amyotrophic lateral sclerosis
shr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100925707 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
100925707 (ALYREF)
03015 mRNA surveillance pathway
100925707 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100925707 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100925707 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100925707 (ALYREF)
03041 Spliceosome [BR:
shr03041
]
100925707 (ALYREF)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100925707 (ALYREF)
TREX complex
100925707 (ALYREF)
Spliceosome [BR:
shr03041
]
Complex C
Other components
EJC/TREX
100925707 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100925707 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
100925707
NCBI-ProteinID:
XP_031821510
Ensembl:
ENSSHAG00000010459
UniProt:
A0A7N4NYY8
LinkDB
All DBs
Position
4:complement(308182628..308186529)
Genome browser
AA seq
258 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGVQGGRGGGGAQAAARVSRGGGPIRNRP
AMARGGAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSD
ADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQ
LVTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGSRGGNRGRGRGTGRNSKQQLS
AEELDAQLDAYNARMDTS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcattaaactcaaccggagccagcgg
ggcggacgcggcgggggccggggccgaggtcgggccggggttcaaggcggccgcggcggc
gggggcgcgcaggcggcagcccgcgtgagccgaggcgggggccccatccggaataggccg
gccatggcccgcggaggcgctgggggcggcggcaggaaccgacccgcgccctacagccga
ccaaaacagcttccagataagtggcagcatgacctgttcgacagtggctttggaggcggg
gccggagttgagaccggtggcaaattgctggtctctaatctggattttggggtctcagat
gcggatattcaggaactatttgctgaatttggaactctgaaaaaggcagctgtacattat
gatcggtctggccgaagcttaggaacagcagatgttcactttgagcgaaaagcagatgct
ctgaaggccatgaaacaatataatggtgtccctttggatggtcgccctatgaacattcag
cttgttacatcacagattgatacacaacgaagacctgcacagagtgtaaatagaggtgga
atgactagaaaccgtggctctggaggtttcggtggtggaggtggcacccggagaggcagt
cgtggaggcaatcgaggacgaggcagagggactggaagaaattcgaaacaacagctttcc
gcagaagaactagatgcacaattggatgcttataatgccaggatggataccagttaa
DBGET
integrated database retrieval system