KEGG   Sarcophilus harrisii (Tasmanian devil): 100925707
Entry
100925707         CDS       T02286                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013  Nucleocytoplasmic transport
shr03015  mRNA surveillance pathway
shr03040  Spliceosome
shr05014  Amyotrophic lateral sclerosis
shr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100925707 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100925707 (ALYREF)
   03015 mRNA surveillance pathway
    100925707 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100925707 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100925707 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100925707 (ALYREF)
   03041 Spliceosome [BR:shr03041]
    100925707 (ALYREF)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100925707 (ALYREF)
    TREX complex
     100925707 (ALYREF)
Spliceosome [BR:shr03041]
 Complex C
  Other components
   EJC/TREX
    100925707 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100925707 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication F07F6_N
Other DBs
NCBI-GeneID: 100925707
NCBI-ProteinID: XP_031821510
Ensembl: ENSSHAG00000010459
UniProt: A0A7N4NYY8
LinkDB
Position
4:complement(308182628..308186529)
AA seq 258 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGVQGGRGGGGAQAAARVSRGGGPIRNRP
AMARGGAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSD
ADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQ
LVTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGSRGGNRGRGRGTGRNSKQQLS
AEELDAQLDAYNARMDTS
NT seq 777 nt   +upstreamnt  +downstreamnt
atggccgacaagatggacatgtccctggacgacatcattaaactcaaccggagccagcgg
ggcggacgcggcgggggccggggccgaggtcgggccggggttcaaggcggccgcggcggc
gggggcgcgcaggcggcagcccgcgtgagccgaggcgggggccccatccggaataggccg
gccatggcccgcggaggcgctgggggcggcggcaggaaccgacccgcgccctacagccga
ccaaaacagcttccagataagtggcagcatgacctgttcgacagtggctttggaggcggg
gccggagttgagaccggtggcaaattgctggtctctaatctggattttggggtctcagat
gcggatattcaggaactatttgctgaatttggaactctgaaaaaggcagctgtacattat
gatcggtctggccgaagcttaggaacagcagatgttcactttgagcgaaaagcagatgct
ctgaaggccatgaaacaatataatggtgtccctttggatggtcgccctatgaacattcag
cttgttacatcacagattgatacacaacgaagacctgcacagagtgtaaatagaggtgga
atgactagaaaccgtggctctggaggtttcggtggtggaggtggcacccggagaggcagt
cgtggaggcaatcgaggacgaggcagagggactggaagaaattcgaaacaacagctttcc
gcagaagaactagatgcacaattggatgcttataatgccaggatggataccagttaa

DBGET integrated database retrieval system