Sarcophilus harrisii (Tasmanian devil): 100925714
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Entry
100925714 CDS
T02286
Symbol
COL26A1
Name
(RefSeq) collagen alpha-1(XXVI) chain isoform X1
KO
K24358
collagen type XXVI alpha (EMI domain-containing protein 2)
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100925714 (COL26A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shr04990
]
100925714 (COL26A1)
Domain-containing proteins not elsewhere classified [BR:
shr04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
100925714 (COL26A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
Collagen
EHMT1-2_CRR
Motif
Other DBs
NCBI-GeneID:
100925714
NCBI-ProteinID:
XP_031823890
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All DBs
Position
4:451933107..452138292
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AA seq
473 aa
AA seq
DB search
MKLPLFLPWACCLYGCTVGTGFLYPYPSAALQHNYPEHGSAPPGSGYANRRNWCHHTVTR
MVSCQVQNGSETVFQRVYQSCRWPGPCTNLVSYRTLIRPTYKVSYRTVTALEWKCCPGFS
GSNCEEGQFSVHPPPRGHLYHLCPTVTGTETVMSQFPKIYSMPECMNCTRLNDMNERLSA
LEVKILLLEAAGSVMTSENDISKTTPTWNKDFLPDAIPLSHPGTGRRNPLGPAGYAGQMG
PPGPVGPSGLPGPPGSKGERGQMGEMGPRGPPGLLGPQGPRGFPGETGLPGPPGPPGPPG
SPGLPPPFQQGVLYSLQPAGEKENGDSQLSSTIVDTIMAGIPGPRGPPGPPGPPGPSGPN
GPPGPMGVPGSQGEPGSKGIEKGKESEGVQQLREALKILAERVLILEHMIGIHDPLASTE
PGSGQEGMLGSASQSSKMKRGGPLGSPQPYNTISSLLDSLEARRNGSESRSLN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcccctcttcctcccctgggcgtgctgcctctacggctgcacggtgggcacc
ggcttcctctacccgtacccgtccgcagccctgcagcacaactaccccgagcacggctcc
gcgcctccgggcagcggctacgcgaaccgccggaactggtgccatcacacggtgaccagg
atggtttcctgccaagtacagaacgggtcagaaacggtgttccagagggtgtaccagagc
tgccgctggccgggcccctgcactaacttagtcagttacaggaccctgatccggcccacc
tacaaagtgtcctaccggaccgtgacggctctggagtggaagtgctgccctgggttttcg
ggaagtaactgtgaggagggccagttttctgtccatcccccaccccgtgggcatctatat
cacctatgtcctacagtgacaggaacagagacagtcatgtcccaattccccaagatttac
agtatgccagaatgcatgaactgcacccgcctgaacgacatgaacgagcggctatccgcg
ctggaggtcaagattcttcttctggaagcggccgggagcgtgatgacttcggaaaacgat
attagcaagaccacgccaacctggaataaggatttcttaccggacgccatcccactgtct
caccctgggaccgggaggaggaaccccctgggccccgcgggatatgctggacagatggga
cctcctggacccgtgggcccctcggggctccctgggccgcctggatcgaaaggcgaaagg
ggccagatgggggagatgggccccagggggcccccagggctcctggggccgcaaggccca
aggggatttcctggagagactgggctccctgggccacctgggcccccgggccctcctggc
agccccggccttccgcccccattccagcagggtgttctgtattccctccagcccgcagga
gagaaggaaaatggcgattcccagctgtcttccaccatagtagacaccatcatggcaggg
atccctgggcctcggggcccgcctggccctccaggaccacctggaccctctggacccaat
ggccccccaggtcccatgggagttccaggctctcagggtgaacctggttcaaaaggaata
gaaaagggaaaagagagcgagggggtgcagcagctccgagaagctctgaagatcttagcc
gagagggtgctgattctggagcacatgatcgggatccacgacccactggcttctaccgaa
ccaggctctggacaagagggcatgctcggctccgcatcacaaagcagcaagatgaagcga
gggggccctttgggctccccccaaccctacaacaccatctcttccctgctcgacagcctg
gaagcccgaaggaatggctccgagagccgcagcctaaactag
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