Sarcophilus harrisii (Tasmanian devil): 100925729
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Entry
100925729 CDS
T02286
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04360
Axon guidance
shr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100925729 (LRRC4C)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100925729 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100925729 (LRRC4C)
Cell adhesion molecules [BR:
shr04515
]
Immunoglobulin superfamily
NGL family
100925729 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
LRRNT
LRR_LRWD1
Ig_6
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
100925729
NCBI-ProteinID:
XP_003773749
Ensembl:
ENSSHAG00000015017
UniProt:
G3WQI0
LinkDB
All DBs
Position
6:complement(226140772..226354203)
Genome browser
AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQMMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPSNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTLQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTENNVGPTP
VIDWETTNVTTSLTPQSTRSTEKTFTIPVTDINNGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPIESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagatgatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctcctggctctccaactcctagtggtggctggt
ctggtgagggcccaaacctgtccttctgtatgctcctgcagtaaccagttcagcaaggtc
atctgtgtgcggaaaaatctcagagaggtccctgacggcatctctaccaacacgcggctc
ctgaatctccacgagaatcagattcagatcatcaaggtgaacagcttcaaacacctgagg
catttggagatcctccaactgagcaggaatcacatccgtaccattgaaatcggggccttc
aatggtttggcaaacctcaacactttggagctctttgacaatcggctgaccaccattcca
aatggggcttttgtatacctgtctaaactgaaggaactctggctgcgaaataaccccatt
gaaagcatcccttcttatgcttttaaccgaatcccgtctttgcgccggttggacttagga
gagttaaagaggctttcgtacatctccgaaggggcctttgaaggtctctccaacttgagg
tatctgaaccttgccatgtgcaacctgcgggaaatcccaaacctcacgccgctcatcaag
ttggatgagctggatctttctgggaaccatttgtccgccattaggccgggctctttccag
ggtttgatgcacctgcagaaattgtggatgatccagtcgcagatccaggtgattgaaagg
aatgcatttgataaccttcagtcactggtagagatcaatctggcacacaataatctgacc
ttactgcctcacgacctcttcacgcccctccatcacctcgagaggatccacctgcatcac
aacccttggaactgcaactgtgacattctgtggctcagctggtggataaaggacatggca
ccctcaaatactgcatgctgtgcccgttgcaatacaccctccaacctgaaagggaggtat
attggggaattggatcagaattattttacctgttacgctcctgtgatcgttgagcctccc
gcggacctcaacgtcacagagggcatggcggcagaactcaagtgtcgggcttccacctcc
ctgacctctgtctcttggattactcccaacgggacggtcatgacacacggagcctacaag
gtccggattgctgtgctcagcgacggcacattaaattttactaatgtaactctacaagat
acaggcatgtatacatgcatggtgagtaactctgttgggaataccacagcttcagccacc
ctgaatgtgaccgcagccaccactaccccattctcgtatttttccaccgttactgtagag
actatggaaccttctcaggacgaggctcggaccacagagaacaatgtggggcccaccccg
gtcattgactgggagaccaccaacgtgaccacctctctcacgccccagagcacaaggtcc
accgaaaaaacattcaccatccctgtgaccgatataaacaatggcatcccaggaattgat
gaggtgatgaaaaccacgaagattatcattggttgcttcgtggccatcactctcatggca
gccgtgatgctggtcatcttctacaagatgcggaaacagcatcatcggcaaaatcaccac
gccccaacgcggactgttgagatcattaatgtggatgatgagattacaggggacacaccc
atagagagccacttgcccatgcctgctatagaacatgagcacctaaatcactataactct
tacaaatctcccttcaaccacacaacaacagttaacacaataaactcaatacacagttca
gtgcatgaaccgttgttgattcgaatgaactcaaaagacaatgtacaagagactcaaatc
taa
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integrated database retrieval system
