Sarcophilus harrisii (Tasmanian devil): 100925976
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Entry
100925976 CDS
T02286
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100925976 (SUPT6H)
03036 Chromosome and associated proteins [BR:
shr03036
]
100925976 (SUPT6H)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100925976 (SUPT6H)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100925976 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
100925976
NCBI-ProteinID:
XP_031823549
Ensembl:
ENSSHAG00000014414
UniProt:
G3WNE4
LinkDB
All DBs
Position
4:435342227..435372380
Genome browser
AA seq
1665 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEDEASDSGDSEDDVGHKKRKRTAFDDRLEDDDFDLIEENLGVKVKRQKFRRV
RKMSDDEDDEEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAAPEEEEEEDEESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYE
YEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLR
SIPVKAAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQPVSSFNRKGPSTIQKIKE
ALGFIRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKENLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKASRKKLKRTREDGDEEEGEGEEVEDEQKGPELKQASRRDMYTICQSAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKVNITPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLKTCLAEE
EGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFL
YVQMAKELKNKLLAEAKEYVIKACSRKLYNWLKVAPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMMIEDVKRIVHELDQGQQLSSIGVEMVDNELAILYMNSKKSEA
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSTDEDILCLKFHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMC
HMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAY
RSPNTEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDAKRKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHV
DVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQECGGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVSVTPEGFRYRGQVF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQANTTPQSTQAQAQPQPSSSSRHRQQPK
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagtgaagcagaggaatccgaggaagagtacaatgatgaggga
gaggtggtacctcgggtcaccaagaaattcgttgaagaagaagaagatgatgaagaagag
gaagaggagaacctggatgaccaggatgaacaagggaacttgaaaggtttcatcaatgat
gatgacgatgaagaggaagaagaggaagatgaggccagtgattctggagactctgaggat
gatgtgggacacaaaaagcggaagcgcacagcttttgatgaccgcttggaagatgatgac
tttgacctcattgaagagaacttgggtgtcaaagtcaaacggcaaaagttcaggcgtgtc
cgaaagatgtccgatgatgaagatgatgaagaggaagaatatgggaaggaggaacatgag
aaagaggccattgctgaggaaatctttcaagatggtgaaggagaagaaggacaggaagct
gtggaggcccccatggctgcaccagaggaggaggaggaagaagatgaagaatcagatatt
gatgacttcatagtagatgatgatggacagcctcttaagaaacccaaatggaggaaaaaa
cttccaggctatacagatgcggccctgcaagaagcccaggaaatctttggggtagacttt
gactatgatgagtttgagaagtacaatgagtatgatgaggagctagaagaggaatacgaa
tatgaagacgatgaggcagaaggtgaaatccgggtgcgacccaaaaagaccaccaaaaag
cgagttagtcggcgaagcatttttgagatgtatgaacccagtgagctggagagcagccac
ctgacagaccaggataatgagatccgagctacagatctgcctgagaggttccagttgcgg
tctatccctgtcaaggcagctgaagatgatgagctggaagaagaagccgattggatctat
cgaaatgcctttgcaacaccaaccatttcactccaggaaagctccgattacctggaccgt
gggcagccggtcagcagtttcaatcgaaaaggccccagcactatccagaagatcaaagag
gccctgggcttcattcgcaatcagcattttgaggtacctttcattgccttctacagaaag
gaatatgtagaacctgagctgcacatcaatgacctgtggagggtgtggcagtgggatgaa
aagtggacacagttaaagatacgaaaagagaatctgacgcggctttttgagaagatgcaa
gcctatcagtacgagcagatatctgccgacccagacaagcccctggctgacggcatcagg
gcattggacaccacagatatggagagattgaaagatgtgcagtctatggatgagctgaag
gacgtctacaaccacttcttactgtactatgggcgtgacatcccaaagatgcagaatgct
gccaaggccagccggaagaagttaaagcgcaccagggaggatggagatgaagaggaaggt
gaaggggaagaagtggaggatgagcagaagggcccagagctgaagcaggcttcccgccga
gacatgtacaccatttgccaaagcgccggcctagatggcttggccaagaaatttgggctc
actccagaacagtttggggagaacctccgggacagttaccagcggcatgagacagagcag
ttccctgctgagcccctggaactggcaaaggactatgtgtgcagtcagttccctacccca
gaggcagtactagagggtgctcgctatatggtggctctgcagattgcccgggagcccctt
gtccggcaagtacttcgacagaccttccaggagagggctaaagttaacatcaccccaacc
aagaagggcaagaaggatgttgatgaggcccattatgcctactctttcaagtatctaaag
aataagcctgtaaaagaacttcgagacgaccagtttctcaagacctgcctggctgaagag
gagggactgctcaccattgatatcagcatcgacatgaagggagttgagggctatggcagt
gaccaaacgtactttgaggagatcaagcagttctactaccgggacgagtttagccaccag
gtgcaagagtggaaccggcagcggaccatggccattgagcgagccctgcagcagttcctc
tatgtgcagatggccaaagagctcaagaataagctgctggctgaagccaaagagtacgtc
attaaggcttgtagccggaagctatataactggctgaaggtggctccctaccgacctgac
caacaggtagaggaagatgatgattttatggatgagaaccaagggaaaggcatccgagtg
ctagggattgccttctcctctgccagagaccaccccgtgttttgtgccttggtcaatgga
gagggagaagtaacagatttcctacggctgcctcactttaccaaacggaggactgcgtgg
agggaagaagagcgggaaaaaaaagctcaggacattgaaacgctaaagaaattccttctg
aacaagaaaccacatgtggtaactatagcaggcgagaacagagatgctcagatgatgatt
gaagatgtgaagcgaattgtgcatgagcttgaccaaggccagcaactgtcatctatcgga
gtggagatggtagacaatgaactggccatcctgtatatgaacagtaaaaagtctgaggcg
gagttcagagattaccccccggttctgagacaagcagtgtctctggcccgacgcatccaa
gaccccttgattgaatttgcacaggtgtgcagcacagatgaggatattctttgtctcaag
ttccaccctttacaggaacatgtggtgaaagaggagctgctcaatgccttatattgcgag
ttcatcaatcgagtcaacgaggttggtgttgatgtcaaccgagcaattgcccatccctac
agccaggccctgatccagtatgtgtgtggcttggggccacgcaaagggacccatctacta
aagattctgaaacagaacaatactcgcctggagagccggacccagctagtcaccatgtgc
cacatggggcccaaggtcttcatgaactgtgcaggttttctgaagatagatacagcctct
ttgggtgacagcaccgattcatatattgaggttttggatggttcccgggtccatcctgag
acctatgaatgggccagaaagatggcggtggatgctctggagtatgatgagtctgctgaa
gatgccaaccctgccggggccttagaagaaatcttggagaacccagaacgactcaaggac
ctggaccttgatgcctttgctgaagagcttgagaggcagggctatggtgataaacacatc
actctctacgacatccgtgctgagctgagctgcaggtataaggatctccggacagcttac
cgctctcccaatactgaggaagtctttaacatgctgactaaggaaacaccggaaaccttc
tacattggaaaactgatcatctgcaacgtaacagggattgcccacagacgtccacagggc
gagagctatgaccaggcaatccgcaatgatgagacagggctatggcaatgtcccttctgc
cagcaggacaatttccctgagctgagtgaggtttggaaccactttgatagtggctcgtgc
ccaggccaggccattggtgtcaagactcgactggacaatggggtcaccggctttatccct
acaaagtttctcagtgacaaggtagtgaagcgacctgaggagcgggtgaaggtggggatg
accgttcactgccgcatcatgaaaatcgacatcgagaagttcagcgcggacctgacgtgc
cgcacctctgatctcatggacaagaacaacgagtggaagctgcccaaagacacatactat
gactttgacgccgaagcagctgaccacaaacaggaagaggatgccaagaggaagcagcag
aggaccacgtacattaagcgagtgattgcacatccatcgtttcataatattaactttaag
caagcagaaaagatgatggagaccatggaccagggcgacgtgattattcggccaagcagt
aaaggggagaaccacctcacggtgacctggaaggtcagcgatggcatttatcagcacgtg
gatgtccgggaagagggcaaagaaaatgcctttagcttgggtgccaccctatggatcaac
agcgaggagtttgaggacctggatgaaattgttgcccgctatgtccagcccatggcatcc
tttgctcgagatcttcttaaccacaagtattatcaggaatgtggtggcggggatcgcaag
aaactagaggagctgctcatcaaaaccaagaaggagaagcccaccttcattccttacttc
atctgtgcctgtaaagagctgcctggcaagttcctgctgggctaccaaccccggggcaag
cccaggatagaatacgtgagtgtgactccagaaggtttccggtaccgaggccaggtcttc
ccaactgtgaatggcctcttccgctggtttaaggatcattaccaagaccctgtgccaggc
atcacgcccagcagcagcagcaggacgagaacaccggcctccatcaacgccacccctgcc
aacatcaacctcgcagatctgaccagagcagtgaatgccctgccccagaacatgacctca
cagatgttcagtgccattgctgctgtgactggccaaggacagaaccccaatgccacccct
gcccagtgggcctccagccagtatggctatggcggcagcggaggtggcagcagtgcttac
catgtgttcccgaccccggcccagcagcccgtggccactccgctgatgacccccagctat
tcatacacaacccccagccagcccatcaccacgccccagtaccaccagctgcaagccaac
accaccccacagagcacccaggcccaggcccagccccagccatcctcgagctcgcggcac
cggcagcagccaaagtga
DBGET
integrated database retrieval system
