Sarcophilus harrisii (Tasmanian devil): 100926009
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Entry
100926009 CDS
T02286
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100926009 (TAF1B)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100926009 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
100926009
NCBI-ProteinID:
XP_003757919
Ensembl:
ENSSHAG00000001155
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All DBs
Position
2:195666662..195762375
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AA seq
585 aa
AA seq
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MDTEETRDFNERCTQCAAVSWGITDEGTYYCTSCLNVTERHKEVESIVDFTPNTKIQAIN
RGLKKKRKLEKGWEWYICEGFQYILYQQAEALLSLGVCPKLKDEVLHNFWKRYLQKSKQA
YCRRPIYSNDNKSVASDSYLSLSGLDSEPELLSIHSYPFSESEAESHSEVSDRLILPNIK
FTHSETTSVCSGSVDGVEYSRQKEKGILKMTMPMTLAFCYLSLLWQREAITLSDLLRFVE
DGHIPYINIHQNFPEEMKLYGRDIKFFATESWPVYEDIYEKMIELAKFLDLPRFPDVTEN
CFLHPNMLCMKYLMEANLPDEMNSLTCQVIRMIGIGEVNFLTFDPITEKTRTVKYDVQAV
AIIIVVLKLLFLLNDNVEWSLSSLAQENNENNQKDRPCFDFRKWYQILKKVIDEKQQKQE
EFRAKYQWKSEKPFYYSSGDRSVVYKRRRMVVNLQKQFSILVDSASNPEKKKPSSFQLNW
TEDQNTTCFHGHSLEKILQKKGKSLTTLNSLYWLSTQKFCKSYCKHVTTYEESNFSMSYQ
FVLNFFSFLLRIKASLLHEEVSLIEKRLFYKKYENKSKASKSKKA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggatactgaggagacgagagactttaatgaacgctgtacacagtgtgctgctgtttcc
tggggaattactgatgaaggaacatattattgcacatcttgtctcaatgttacagagagg
cataaggaggttgaaagtattgtggactttacacctaacacaaagatccaagccatcaac
agaggacttaaaaaaaaaaggaaacttgagaaaggctgggaatggtatatctgcgaaggt
tttcagtatatactttatcaacaagccgaggctctgctatccctaggagtatgtcccaaa
ttaaaggatgaagtattacataatttttggaagcgttatcttcaaaagagcaagcaggca
tattgccggaggccaatttattccaatgataataaatctgtagcgtctgacagctatttg
agtctttcaggcttggatagtgaacctgagctgcttagtatccatagctaccctttctca
gaaagtgaagcagaatctcactctgaagtcagtgatagactgattcttcccaacatcaaa
tttacacactctgaaactacctctgtatgttctggatcagttgatggagtcgagtactca
aggcagaaggaaaaagggattttgaagatgactatgccaatgacacttgcattctgctat
ctatcattactttggcagagggaagcaattaccctttcagatctcttgagatttgtagaa
gatggtcatattccctacataaacattcaccagaattttccagaggagatgaagttatat
ggacgagacataaaattttttgccactgagtcttggcctgtctatgaagatatatatgaa
aaaatgattgagcttgcaaaatttttggacttaccccgttttccagatgtaactgagaat
tgttttctccatccaaatatgttgtgtatgaagtatctgatggaagccaatttacctgat
gaaatgaatagcctgacttgtcaagtgatcagaatgattggaataggagaagtgaatttc
ctgacatttgatccaataactgaaaagacaaggacagttaaatatgatgttcaggctgtg
gctatcattattgtggtgttgaaacttctctttttattgaatgataatgtagaatggtcc
ctttctagccttgctcaagaaaataatgaaaacaatcaaaaagataggccatgttttgac
ttcagaaagtggtatcagattttgaagaaagtaattgatgagaaacaacaaaaacaagag
gaattcagagcaaagtaccaatggaaaagcgaaaagccattttattattcatcaggggac
agatcagtagtttacaaaagacgacgaatggtagtgaacctccaaaaacagtttagcata
ctggttgattcagcatcaaatcctgaaaagaaaaaaccatcaagtttccagttaaattgg
acagaagaccagaatacaacttgcttccatggacacagtcttgagaaaatcctacaaaag
aaaggcaaatcattaacaaccctcaactcactatattggcttagtactcagaaattctgt
aagagttactgtaagcatgtgactacctatgaagaatcaaatttttctatgagctaccag
tttgtattaaattttttctcctttttattgaggataaaggcttcactacttcatgaagag
gtaagcttaattgaaaagagactcttttacaaaaaatatgagaataaaagtaaagcctcc
aaatctaaaaaagcatga
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