Sarcophilus harrisii (Tasmanian devil): 100926054
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Entry
100926054 CDS
T02286
Symbol
LAMA4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04151
PI3K-Akt signaling pathway
shr04510
Focal adhesion
shr04512
ECM-receptor interaction
shr05143
African trypanosomiasis
shr05145
Toxoplasmosis
shr05146
Amoebiasis
shr05165
Human papillomavirus infection
shr05200
Pathways in cancer
shr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100926054 (LAMA4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100926054 (LAMA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100926054 (LAMA4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100926054 (LAMA4)
09162 Cancer: specific types
05222 Small cell lung cancer
100926054 (LAMA4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100926054 (LAMA4)
09174 Infectious disease: parasitic
05146 Amoebiasis
100926054 (LAMA4)
05145 Toxoplasmosis
100926054 (LAMA4)
05143 African trypanosomiasis
100926054 (LAMA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_laminin
EGF_LMN_ATRN
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100926054
NCBI-ProteinID:
XP_031820246
LinkDB
All DBs
Position
4:188939517..189110218
Genome browser
AA seq
1822 aa
AA seq
DB search
MALISAWSYAFPILLFLGCLSSSNAAVEGSAFQFDIEGSSAISKQDLTDNREPSLAAGNP
VLFAESCGVGFFHSVTGECLPCDCNGNSNECLDGSGFCVNCQRNTTGEHCEKCPDGFIGD
VIRGAPRLCQPCPCPLPHMANFAVSCYRKSGVVRCICKEKYAGPNCERCAPGYYGNPLLI
GSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCEQCAPGYYGDARIAKNCAV
CNCRGGPCDSETGECLEESFEAPTGTDCPTISCDKCIWDLTDDLRLAALAIDESKSNLLS
VSSGVAAHRHVNEINSTVYLLKAKFSERENQYLLRKIQISDAENTMKDLLSDLEELTEKE
NRAAKKSQLVHKETMDTINYATQLVEDAHNMRDKIQEINSKMLYYGVEQDLSPEEISEKL
VLAEDMLMEIKRRKPFFLQRELVDEEADEAQELLSLAENWQRLHNDTRSLFPVVLEQLDD
YDAKLSELQESLEESLDRVRDAEHLNRANAARQRDNEKQHERIKEQVEVVNTSLSESTES
LEIPRLTISELSDVIKNASRIYAEIDGAKTELQDKLSNLTTLDHDLVQQAVEHAQDLQQQ
ANELNSSLHRLDTNGLVQKALDASNVYENIINYVHEANESAVLALSITDRVNDAVVGIDT
QITYHKDESENLLSQAKTLQAAADSSNEQAVADTSQRVDGAQARKTFLKSRLDEAIKKLQ
AAEKGDAEQRLDHSKRIIAEAEKTTMVVGRETTPMMNNLTNWSQSLHHFDSSAYNTAVDS
ARAAVRNLTEVVPQLLDQLRTVEQKRSASNVSDSIRRIRELIAQTRSVASKIQVSMMFDG
QSAVEVNTKTSVDDLKAFTSMSLYMKPPAKSAVKNENADRFILYLGSKNAKSDYMGLAIK
NDNLVYIYNLGNKEVEIPLDSKPVSTWPAHFSIVKIERVGKHGKIFLTVPSLTSTAEEKF
IKKGEVSGDDSLLDLSPEDTVFYVGGVPPNFKLPASLNLPGFIGYLELATLNNEVISLYN
FKHIYNMDPSKSIPSARDKLAFTQSRAASYFFDGSSYAVVRDITRRGKFGQVTRFDIEVR
TPTANGLVLLMVNGSTFFSLEMRNGYLNVFYDFGFSNGPVHLEDSQKKAPINDAKYHEIS
IIYHNDKKMILVVDRRHVKSMDNEKMKIPFTDIYIGGAPPEVLQSSNIKVHLPLDVNFRG
CMKGFQFQKKDFNLLEQPETLGVGYGCPEDSLISRRAYFNGQGFIASSQKISFFDAFEGG
FNFRTLQPNGLLLYYAAGSDIFSISMDKGTVILNVKGIKVQSTDKKYDDGQSHFIIASIS
PTRYELIVDKDRLGKNNPSKGKTDQTPARESKFYFGGSPISPQYVNFTGCISNAYFTRLD
RDIEVEDFQRYSEKIQTSLYECPIETAPISLLHKKGKNSSKPKINKNKKNEKNKDSPRNP
IGLKTLKQNVFRDSHCQLSSSPKAISHAYQYGGTANSRQEFEHLKGNFAEKSQFSIRLKT
RSSHGMIFYVSDQEENDFMTLFVAHGRLVFMFNAGHKKLKLRSQEKYNDGLWHDVIFIRE
KNSGRLIIDGLRVLEESFPPTGADWKIEAPIYLGGVAPGKAIKNVQINSVYSFSGCLSNL
QLNGTSITTASQTFSVTPCFEGPMESGTYFSSEGGYVILDESFNIGLKFEIAFEVRPRSS
SGILVHGHSVNGEYLNVHMKNGQVITKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSN
VVQLDVDSEVNHVVGPLNPKSVDHREPVFVGGVPESLLTPSLTMGRPFSGCIRNFVIDER
PVSFSKAALVSGAVSINSCPAA
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatctctgcctggtcttatgcttttcctatactgctgtttttgggatgcttg
tcctccagcaatgcagcagtggaaggcagcgcttttcagtttgacattgaaggtagttct
gcaatcagcaaacaagacttgactgataacagagagccatcactagctgctgggaatccg
gtgctttttgctgagagctgtggagtgggattttttcactctgtgactggagagtgctta
ccatgtgattgtaatgggaattcaaatgagtgtctggatggctctggattctgtgtgaac
tgtcaacggaacactactggagaacactgtgaaaagtgtccagatggtttcattggggat
gtcatcagaggagctcctagactctgtcagccatgcccttgccccctgccccatatggcc
aattttgcagtatcctgttacagaaaaagtggtgtggtacgatgtatttgtaaagaaaaa
tatgctggccctaactgtgaaaggtgtgcccctggttactatggaaaccccttactgatt
gggagcacctgcaagaaatgtgactgcagtggaaattcggatcccaacctgatatttgag
gattgtgatgaagttactggccagtgtcgcaactgcttacgaaataccaccggattcaaa
tgtgaacaatgtgcccccggatattatggggatgccaggatagctaagaactgtgcagta
tgcaattgcaggggaggaccatgtgacagtgaaactggagaatgccttgaagaaagtttc
gaagctcctacaggcacggactgcccaactataagctgtgacaaatgcatctgggatttg
actgatgacctacgattagcagctcttgctatcgatgaaagcaaatcaaatttgttgagt
gtatcatctggagtagctgctcacaggcatgtaaatgaaatcaattctactgtttacctc
ctcaaggcaaagttttcagaaagagaaaaccaatacctcctaagaaaaatacagatcagt
gatgctgagaatacaatgaaggatcttctctctgatttggaggaactaactgaaaaggaa
aatcgagctgcaaaaaaaagccagctggttcataaggaaactatggataccatcaactat
gcaacccaacttgtagaagatgcccataatatgagagataagatccaagagatcaacagc
aagatgctatattatggagttgagcaagaccttagtcccgaagaaatctctgaaaagctt
gtattagcagaggacatgctgatggaaatcaaacgtcgaaagcccttcttccttcaacgg
gagcttgtggatgaagaggctgatgaagcgcaagaactgttatccctcgctgaaaactgg
caacggctccacaatgacacaaggtcactgtttcctgtggtattagagcagcttgatgac
tatgacgccaagttgtcagaacttcaagagtcactggaagaatctcttgaccgtgtcaga
gatgctgaacacttgaacagggccaatgctgccagacaacgggacaatgagaaacaacat
gaaagaatcaaagaacaggtagaagtggtgaacacttctttgagtgaatccacagaatct
ctagaaatccctcgtctgaccatctctgaactaagtgatgtcataaagaatgcatcaagg
atttatgccgaaatcgatggagccaaaacagagctacaagataaactctccaatttgacc
actctcgatcatgacttggtccagcaagctgtagagcatgcacaggaccttcagcaacag
gctaatgagctaaatagcagtctccacagattggatactaatggattagtacagaaggct
ctggatgcatcaaatgtctatgaaaatatcatcaactatgtccatgaggccaacgagtca
gcagtactagctttgagcattacagacagagtcaatgatgctgtagttgggattgacact
cagatcacttaccacaaagatgaaagtgaaaatcttctcagtcaagccaagacactgcaa
gcagcagcagattctagcaacgaacaggctgtggctgataccagccagcgtgtggatgga
gcccaagctcgaaagacttttctgaaaagcaggctagatgaagctattaagaaacttcaa
gcagcagagaaaggggatgcagagcagcgtctggatcactcaaagcgaatcattgcagaa
gctgagaagacgaccatggtggtaggccgagaaaccaccccaatgatgaacaatctaacc
aactggtcacagagtcttcaccattttgattcttcggcctacaacactgcagtagactct
gctagagctgcagtaagaaatttgactgaagtcgtcccccagctcctggatcagctgcgt
acagtggagcagaagaggtctgcaagcaacgtttcagacagcattcggaggatcagagag
ctcattgcacagaccaggagtgtagctagcaagattcaagtctccatgatgtttgatggt
cagtcagcagttgaagtcaacaccaaaactagcgtggatgacttaaaagcctttacttcc
atgagcctgtacatgaaacctccagcaaaatcagcagtgaagaatgagaatgcagataga
tttatcttatatcttggaagcaaaaatgcaaaaagtgattatatgggtcttgcaatcaaa
aatgataacctggtatacatttataatctgggaaacaaggaagtggagattcctctagac
tctaaaccagtcagcacttggccagcccacttcagtattgtcaaaattgaaagggtagga
aaacatgggaaaatattcctaacagttccaagcctaactagcacagctgaagaaaagttt
atcaagaaaggagaagtctctggcgatgactccctcctagatttgagtccagaggacact
gtcttttatgttggaggagtgccaccaaattttaagcttcctgctagtttgaatctgccc
ggtttcattggttatctggagttggctactttgaataatgaggtgatcagtttatataat
tttaagcacatctacaacatggacccttcaaaatcaatacccagtgcaagggataaactg
gccttcactcaaagtcgggctgccagttatttctttgatggttcaagttatgcagtggta
agggatatcacaagaagaggaaaatttggacaagtaacacgttttgacattgaagttaga
acaccaacagccaatggtttggtgctcctcatggtgaatgggagtacatttttcagcctg
gagatgagaaatggctacctgaatgtattttatgattttgggttcagcaatggccctgtg
catcttgaagactcccagaagaaagcgccaattaatgatgcaaaataccacgagatttca
atcatttaccacaatgataaaaaaatgattttggtagttgacagacggcatgtgaaaagc
atggataatgaaaaaatgaaaataccttttacagatatatacattggaggagctcctcca
gaagtgttacaatccagtaatataaaagtacaccttccattagatgttaacttcaggggc
tgcatgaagggtttccagttccaaaagaaggatttcaatttattggagcagccagaaaca
ttaggagtaggttatggctgcccagaagactcacttatatcccgcagagcatatttcaat
ggacagggtttcattgcttcaagccagaaaatatctttcttcgatgcctttgaaggaggt
tttaatttccggacactgcagcccaatggactactactctattatgctgcagggtcagat
atattttccatttccatggataagggaacagtaatattaaatgtaaagggaatcaaagtt
cagtcaacagataaaaagtatgatgatggtcaatctcatttcatcattgcctctatatca
cccacaagatatgaactcatcgtggataaggacagattgggtaaaaataatccaagcaaa
ggaaaaacagaccagactcctgccagagagagcaagttctattttgggggctcaccaatc
agtccccagtatgttaatttcactggatgcataagcaacgcttatttcaccaggttggac
agggatatagaggtagaagattttcaacggtactctgagaaaatccaaacctccctttat
gagtgccccattgaaacagcaccaatttctctcctgcacaaaaagggaaaaaattcctca
aagcccaaaataaataagaacaaaaagaatgagaaaaataaagactcacctcggaatcca
attggcctgaaaaccttaaaacagaatgttttccgggactctcactgtcaactttctagc
agtccaaaagcaatctcccatgcctatcaatatggagggacagctaacagccgccaagag
tttgaacatttaaaaggaaattttgctgaaaagtctcagttttctattcgtttgaaaact
cgctcttcccatggaatgatcttctatgtctctgatcaagaagaaaatgatttcatgact
ctttttgtggcacatggacggctagtcttcatgtttaatgctggccataaaaaactgaag
cttaggagtcaggagaagtataatgatggattgtggcatgatgtgatatttattcgagaa
aaaaacagtggtcgtttgataattgatggtctccgggtcctagaagaaagttttcctcct
actggtgctgattggaaaattgaggcacctatttacttgggaggtgttgctcctggaaaa
gctattaaaaatgtccagatcaattcagtctacagtttcagtggttgtcttagcaatctt
cagctcaatgggacctcaattactacagcttctcaaacattcagtgtgactccttgtttt
gaaggtccaatggaaagtggaacgtatttttcatcagaaggaggatatgtgattctagat
gagtctttcaatattggattgaagtttgaaatagcctttgaagttcgtcccagaagtagt
tcaggaatcctggtccatggtcacagtgtgaatggagagtatctgaatgttcacatgaaa
aatggtcaggtcataacaaaggtcaacaatggtatcagagacttttctacttcagttaca
cccaaacagagtctctgtgatggcagatggcacagaataacagttattagagattccaat
gtggttcaactggacgtagattctgaagtcaaccatgtggttggtcccctcaatccaaaa
tcagttgatcacagagaaccagtatttgttggaggtgtgccagagtctcttctgacacca
agcttgaccatgggtagacccttctctggctgtatccgaaacttcgtgattgatgaacgt
ccagtaagcttcagtaaagcagcactggtcagtggtgctgtgagcattaattcttgtcca
gcagcctaa
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integrated database retrieval system
