KEGG   Sarcophilus harrisii (Tasmanian devil): 100926116
Entry
100926116         CDS       T02286                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013  Nucleocytoplasmic transport
shr04141  Protein processing in endoplasmic reticulum
shr04150  mTOR signaling pathway
shr05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100926116 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100926116 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100926116 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100926116 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100926116 (SEC13)
   04131 Membrane trafficking [BR:shr04131]
    100926116 (SEC13)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100926116 (SEC13)
Membrane trafficking [BR:shr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    100926116 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100926116 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    100926116 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WDR55 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_EML Beta-prop_NOL10_N NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 100926116
NCBI-ProteinID: XP_031810950
Ensembl: ENSSHAG00000016558
UniProt: G3WVP0
LinkDB
Position
1:complement(50118038..50135298)
AA seq 321 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLLL
ACGSSDGAISLLSYSGEGQWEVKKINNAHTIGCNAVSWAPAVIPGSLVDQPSGQKPNYIK
KFASGGCDNLVKLWKEEEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGNTWSPRLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWMCI
SDVNKGQGSVSSITEGQQNEQ
NT seq 966 nt   +upstreamnt  +downstreamnt
atggtgtcagtcattaacacggtggatacctcccatgaggacatgattcatgatgcccag
atggactattatggcacccgcttggccacctgctcatcagatagatctgtcaaaatcttt
gatgtacggaatgggggtcagattctcattgctgacctgagaggtcacgaaggccccgtg
tggcaagtggcctgggctcatcctatgtatggaaacatcttagcctcctgctcctatgac
cggaaagtcatcatctggaaagaagaaaatggcacatgggagaaaacatacgaatacaca
ggacacgactcttcagtgaactctgtgtgctgggccccccacgactacgggctcctcctg
gcctgcggcagctccgacggagccatttccctgctgagctacagcggcgagggacagtgg
gaagtgaagaagatcaacaacgcccacaccattggctgcaatgccgtgagctgggctcct
gctgtcatacctgggagtctggtagaccagccgtctgggcagaagccaaactacatcaag
aagtttgcctcgggaggctgtgacaacctggtcaaactatggaaggaggaggaggatggt
cagtggaaggaggatcagaagctggaagctcacagcgactgggtccgagatgtagcctgg
gccccctccattggcctgccgacgagcaccatcgccagctgctcccaggatggtcgtgtg
ttcatctggacctgcgatgatgcctctggaaatacgtggtctcccagattactgcacaag
ttcaatgacgttgtgtggcacgtgagctggtcgatcacagccaacatcctggctgtttca
ggaggagacaacaaagttactctgtggaaggaatcggttgatggacagtggatgtgtatc
agtgatgtcaacaaaggccaaggttcggtgtcttccatcacagagggccagcaaaatgag
cagtga

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