Sarcophilus harrisii (Tasmanian devil): 100926116
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Entry
100926116 CDS
T02286
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr04141
Protein processing in endoplasmic reticulum
shr04150
mTOR signaling pathway
shr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100926116 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100926116 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100926116 (SEC13)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100926116 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100926116 (SEC13)
04131 Membrane trafficking [BR:
shr04131
]
100926116 (SEC13)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100926116 (SEC13)
Membrane trafficking [BR:
shr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100926116 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100926116 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
100926116 (SEC13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WDR55
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_NOL10_N
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
100926116
NCBI-ProteinID:
XP_031810950
Ensembl:
ENSSHAG00000016558
UniProt:
G3WVP0
LinkDB
All DBs
Position
1:complement(50118038..50135298)
Genome browser
AA seq
321 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLLL
ACGSSDGAISLLSYSGEGQWEVKKINNAHTIGCNAVSWAPAVIPGSLVDQPSGQKPNYIK
KFASGGCDNLVKLWKEEEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGNTWSPRLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWMCI
SDVNKGQGSVSSITEGQQNEQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagtcattaacacggtggatacctcccatgaggacatgattcatgatgcccag
atggactattatggcacccgcttggccacctgctcatcagatagatctgtcaaaatcttt
gatgtacggaatgggggtcagattctcattgctgacctgagaggtcacgaaggccccgtg
tggcaagtggcctgggctcatcctatgtatggaaacatcttagcctcctgctcctatgac
cggaaagtcatcatctggaaagaagaaaatggcacatgggagaaaacatacgaatacaca
ggacacgactcttcagtgaactctgtgtgctgggccccccacgactacgggctcctcctg
gcctgcggcagctccgacggagccatttccctgctgagctacagcggcgagggacagtgg
gaagtgaagaagatcaacaacgcccacaccattggctgcaatgccgtgagctgggctcct
gctgtcatacctgggagtctggtagaccagccgtctgggcagaagccaaactacatcaag
aagtttgcctcgggaggctgtgacaacctggtcaaactatggaaggaggaggaggatggt
cagtggaaggaggatcagaagctggaagctcacagcgactgggtccgagatgtagcctgg
gccccctccattggcctgccgacgagcaccatcgccagctgctcccaggatggtcgtgtg
ttcatctggacctgcgatgatgcctctggaaatacgtggtctcccagattactgcacaag
ttcaatgacgttgtgtggcacgtgagctggtcgatcacagccaacatcctggctgtttca
ggaggagacaacaaagttactctgtggaaggaatcggttgatggacagtggatgtgtatc
agtgatgtcaacaaaggccaaggttcggtgtcttccatcacagagggccagcaaaatgag
cagtga
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integrated database retrieval system