Sarcophilus harrisii (Tasmanian devil): 100926213
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Entry
100926213 CDS
T02286
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shr03009
]
100926213 (DDX10)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100926213 (DDX10)
Ribosome biogenesis [BR:
shr03009
]
Eukaryotic type
90S particles
Helicases
100926213 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
100926213
NCBI-ProteinID:
XP_031816961
Ensembl:
ENSSHAG00000008417
LinkDB
All DBs
Position
3:484255975..484506082
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AA seq
733 aa
AA seq
DB search
MGKPASSSRGGPETESRSDKKSKARRDKESRARTDPVLNFERWKKKHIRKQKKMKELRKQ
LKRPEWQVERETIGRLTTEYQKINVNEIMRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTI
GLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEV
LRKVGKNHDFSAGLIIGGKDLRHESERINQINILICTPGRLLQHMDETTYFHATNLQMLV
LDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKA
KYSTPATLDQNYVVCELHQKISVLYSFLRSHLKKKSIVFFASCKEVQYLFRVFCRLRPGI
SILALHGKQQQMRRMEVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDASTYI
HRAGRTARYKEGGESLLILLPSEVKGMVHQLSQRKVPVKEIKINPEKLIDIQKKLEAFLA
QDQDLKERAQRCFVSYLRSVYLMKNKEVFDVNKLLLPEYALSLGLAVAPRVRFLQRIQQQ
MTKESMISKAYHESKDEKRPVASSLTNDEVEEFRAYFNEKMSILQQGEKTPAEKDKEKPA
RVVDKEENENEGKELEEDKGTEEKVEKVKEFEIQALPATNETSKDKVISVQNLDGDEEDE
DGLDVDFFRVKRHNVFGLDLKESTIQKKPPNSSIKKKATKVTEAKKVMKRKFKVNTKVTF
TEEGEFCPLGPSR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagccggcttccagcagccggggcggccccgagaccgaaagccggagcgacaag
aaatctaaggctcggagagacaaggagtccagagctcgcaccgacccggtcttgaatttc
gagcgatggaagaagaaacatatccgcaagcagaaaaagatgaaggagctgaggaagcag
ctcaagaggcccgagtggcaggtggagcgggagaccatcggccgcctgaccacggaatac
cagaagataaatgtaaatgaaatcatgagattttctgattttcctttgtccaaaaaaaca
ttgaaaggcctgcaggaagcacagtatcggatggtgactgagatacagagacaaacgatt
ggtcttgctttacagggtaaagatgtgcttggagctgcaaagacaggatcaggcaaaact
ttggcttttcttgtccctgttctggaggcattatatcgcctacagtggacatcaacagat
ggccttggtgttttgataatatcaccgactagagaattagcgtatcagacctttgaagta
cttcgaaaagtgggcaagaaccatgacttttcggctggtcttatcattggtggaaaggat
ctgagacatgaatctgagaggatcaaccaaataaatatacttatatgcacaccaggacgg
cttcttcaacatatggatgaaacaacttattttcatgcaaccaatctccaaatgttggta
cttgatgaagctgaccgaatcttggacatgggctttgctgatacaatgaatgctattata
gaaaaccttcccaaaaaacgccagactttgcttttctcagcaacacagaccaagtctgtg
aaagatcttgcacgtctgagcttgaaggatcctgaatatgtttgggtccatgaaaaggca
aaatatagtactccagccactttggaccagaactatgtggtttgtgagctgcaccaaaaa
atcagtgtgctttattccttcttgaggagccatctgaaaaagaagagtattgtgttcttt
gccagttgtaaagaggttcagtatctgttccgagtgttctgcaggttacggccaggtatt
tctatccttgctctccatggcaaacagcagcaaatgagaagaatggaagtctataatgaa
ttcgtccgcaagaaagctgcagttctttttgctactgacattgcagcaagggggctagat
tttccagctgtgaattgggtccttcagtttgactgtccagaagatgccagcacctatatc
catagagcaggcagaacagccaggtataaggaaggtggtgagtcattgttaattttgctc
ccatctgaagtaaaaggaatggttcatcagctttcccagaggaaagttcctgtgaaagaa
atcaaaattaatcctgaaaaacttatagatatccagaagaaacttgaagcatttttagct
caagatcaagatctaaaagaacgggcccaaaggtgttttgtgtcctacctgcgttcagta
tatctaatgaagaataaagaagtgtttgatgtgaacaagttgcttctacctgaatatgct
ctttctcttggccttgctgtggcaccacgggtaagatttcttcagagaatacagcaacaa
atgacaaaagaatcgatgataagcaaagcatatcatgaaagcaaagatgaaaagagacct
gttgcttcttccctcaccaatgatgaagtggaggagtttagagcatatttcaatgagaaa
atgtccattcttcagcaaggagagaagacgcctgcagagaaagacaaagagaaaccagca
cgtgttgttgataaagaagaaaatgaaaacgaagggaaagaactggaggaagataaaggt
acagaggagaaagtagaaaaagtcaaggagtttgaaatacaagctcttccagctactaat
gagacttcaaaagacaaagtgatttctgtacagaatttagatggagatgaagaggatgaa
gatggtcttgatgttgacttctttagagtcaagcgacataatgtatttggattagacctt
aaagaatctaccatccagaagaaaccacccaattctagcatcaagaaaaaagcaaccaaa
gtgacagaagcaaaaaaagtgatgaaaaggaaatttaaagtaaatacaaaagtcactttt
acagaagaaggagagttctgccctctagggccaagcagatag
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