Sarcophilus harrisii (Tasmanian devil): 100926220
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Entry
100926220 CDS
T02286
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100926220 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shr03400
]
100926220 (XRCC5)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
100926220 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
100926220
NCBI-ProteinID:
XP_031813944
Ensembl:
ENSSHAG00000014688
LinkDB
All DBs
Position
3:complement(66203556..66319393)
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AA seq
732 aa
AA seq
DB search
MAWSGNKAAVVLCLDVSFNMMHSFPGEESSFEQAKKVMTMFLQRQVFAEAKDEVALVLFG
TDTTKNDLATGDQYQNITVHRHLMLPDFELLEDLQNSVQPGTRQADFLDALVVCMDVIQK
ETIGKKFERKHIEVFTDLSSPLSKDQLDVIVNNLKRSDISLQFFLPFPVDGEDGSEDTDD
SSFDSERHKPSLPPKGLTEQQKEGVCVVKNIMMLLEGEDGLNEIYSFSESLRQLSVFKKI
ERRPMPWPCQLTIGSNLSIRIVAYKSVTQEKVKKTWTVVDARTLRKEDLQKETVYCLNDD
DETEVQKEDTIQGFRYGSDIVPFSKVDEEQMKYKTEGKCFSVLGFCRSSQVHRKFFMGNQ
VLKVFAAKDDEAAAVALSSLIHALDQLDMVAIVRYAYDRRSNPQVGVAFPFIKQAYECLV
YIQLPYMEDLRQYLFSSLRINKKCIPTEAQLSAVDALIDSMSLVNRDDDEDTLEDLFQTS
KIPNPQFQRLFQCLLHRALHPSDPLPPIQQHIWDMLDPPEEVTAKCQAPLSKIKTLFPLT
EAMKKRDQVTAQDVFQDNHEDGPVFKKAKTEEGEVNFSISSLAEGSITSVGSVNPAENFR
VLVRRKNANFKEVSCQLIHHIDQFLETKGLQYYMKSLDCIKAFREEAIQLSEEQNFNNFL
QALRDKVEDKALNDFWNIVVQDGITLITKDESPGSSVTAEEAKKFLIPKEKAAEIMDAAE
EGGDVDDLLDMM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtcagggaataaggcagctgtagtgctgtgcctagatgtgagctttaacatg
atgcactcatttcctggtgaggagtcttcatttgaacaagctaagaaggtgatgaccatg
tttttgcagcggcaggtgtttgctgaggccaaagatgaagttgctttagtactttttggt
acggacaccactaagaatgaccttgccactggggatcagtatcagaatatcactgtacac
agacacctaatgctacctgattttgaattgctggaagaccttcagaattcagttcagcca
ggcaccagacaagctgacttcctcgatgctcttgttgtgtgcatggatgtgatacaaaaa
gaaaccattggaaagaagtttgagaggaaacacattgaagtgttcactgatctgagtagc
cctttgagcaaagaccaactggacgttattgttaataacttgaagcggtctgatatctcc
cttcagttctttcttccttttccagttgatggagaagatgggtctgaggatacagatgac
agcagctttgattctgagagacacaaaccatctcttccaccaaaaggactcaccgagcaa
cagaaagaaggtgtttgtgtggtgaagaatataatgatgttactggaaggagaagatggt
ctaaatgagatttactccttcagtgagagtctgaggcagctgagtgtctttaagaaaatt
gaaaggagacccatgccctggccctgccagctgaccattggctctaatctgtctatcagg
attgtggcctacaagtcagttactcaggagaaagtgaaaaaaacttggacagttgtagat
gctcgaactctaaggaaggaagatttacaaaaggaaactgtttattgcttaaatgacgat
gatgaaactgaagtccagaaagaagacaccatccaagggttccgctatgggagtgatatc
gttcctttctctaaagtggatgaggagcaaatgaaatacaaaacagaaggaaaatgtttc
tctgttttgggattctgtagatcttctcaggtacacagaaaattctttatgggaaaccaa
gttctaaaagtgtttgctgcaaaagacgatgaggcagcagcagttgcgctctcctccttg
attcatgcattggatcaattagacatggtagccatcgtccggtatgcttatgacagaaga
tctaatccacaggttggcgtagcttttccttttatcaagcaagcttatgagtgcttagta
tatatacagttgccctacatggaagacttaagacaatacctgttttcctccttgagaatc
aataagaagtgtattcccacagaggctcagctttctgcagtcgatgctttgattgactcc
atgagcttggttaacagagatgatgatgaggatacccttgaagacttatttcaaacctct
aaaattccaaatccccagtttcagaggttgtttcagtgcctgctgcatagagctttgcac
cccagtgatcctctgcccccaatccaacagcatatctgggacatgctggatccccctgag
gaggtgacagctaagtgccaagcccctctctccaaaataaagactctttttcccctgact
gaagccatgaagaaaagggatcaagtaaccgctcaggatgtctttcaagataaccatgaa
gatggacctgtgtttaaaaaagccaaaactgaggaaggggaagtcaactttagtatctcc
agcctggctgagggcagcatcaccagtgttggcagtgtgaacccagctgaaaacttccgt
gttctagtgagacgaaagaacgccaatttcaaggaagtaagctgccagttgatacaccat
attgaccaatttttggagaccaaaggactacagtactatatgaagagccttgactgcatc
aaagcattcagagaggaagccattcagttgtcagaagaacagaattttaacaatttctta
caagcccttcgagacaaagtagaagataaagctctaaatgatttctggaatattgttgtt
caagatgggattactctgatcacaaaagatgaatctccaggaagctctgtgacagctgag
gaagccaaaaagttcctaatcccaaaggagaaagcagctgaaatcatggatgcagctgaa
gaaggaggagatgtggatgatttactggacatgatgtaa
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