Sarcophilus harrisii (Tasmanian devil): 100926303
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Entry
100926303 CDS
T02286
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100926303 (RC3H1)
04121 Ubiquitin system [BR:
shr04121
]
100926303 (RC3H1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100926303 (RC3H1)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100926303 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100926303
NCBI-ProteinID:
XP_031792778
Ensembl:
ENSSHAG00000007589
UniProt:
G3W007
LinkDB
All DBs
Position
4:complement(61600822..61672004)
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AA seq
1134 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQDELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILSEE
GAVDLPSRKPTALPNGIVSAGNAVTQLIPRGTDSSYDSGLKPGKIDHLSSSAPGSPPDLL
EPGPKNISALPVTPHSVPPRGPTDLPSMPVTKPLPMVPRGSQLYSAQQADVFYQDPRGAA
PPFEPAPYPPGMYYTPTPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYSPMYPPHYDGRRVYSTPSYPREEIFQESPVPIEIPPATVSPYVPESRERYQQIEGYYP
VGPHPSQIRPPYIREPYSRLPPPLQAHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPT
LPHSFHPEEYLDDDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVVPGGVDMT
NVDSKSVRDQRLELQRRVAETSDDDLIPFGDRPTVSRFGAISRTSKTMYQGSGPMQALAA
QGASTKSISISDYSPYGAHGGWGGSPYSPHQTMPSQGHFTERERLSMSEVASHGKPLPSA
EREQLRLELQQLNHQINQHTQLRGLEAVSNRLLLQRETNTLAGQPPPQPPPPPPKWPGMV
SSEQLSLELHQVEREIGKRTRELSLENQSSLDMKNKLGSSKQAENGQAEPQNKVPTEDLA
LTFSSEVPNGSSLSQENISLLSNKTSSLTLAEDPEGGGDNNDSPRTGVTPSSAP
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccgcaatggacggatttcctctcctgcccaatttgcactcagaca
ttcgacgaaacgatccgaaagcccatcagcctcggctgtggccacactgtctgcaagatg
tgcctgaacaagcttcaccgcaaggcgtgcccctttgaccagaccactatcaacaccgac
atagagctcctgcctgtgaactcggccttgctgcagttagtgggtgctcaggtccctgag
cagcagcccattactttgtgtagtggggtagaagatacaaaacattatgaggaagcgaag
aaatgtgtggaggaattggcattatatttgaaaccactcagcagtgcaagaggagtaggc
ctgaacagcaccactcagagtgttctgagccgcccaatgcagaggaaattggtgacgtta
gtccactgccaactagtggaagaagaaggtcgaattcgtgccatgagggcagctcgatct
ttaggggaacggactgtcacagaactaatcctccagcaccagaatcctcaacaactttct
tcgaatctttgggcagcagtcagggccagaggctgccagttccttggaccagcaatgcag
gaggaagccctgaaactggtcctgttggccttagaagatggatctgctttgtctcgaaaa
gtcttagttttatttgtggtgcaaagattggagccacgatttcctcaggcctcaaaaacc
agcattggacatgttgttcagctattgtacagagcctcctgtttcaaggtgacaaaacgt
gatgaagattcctctttaatgcaattgaaggaggagtttaggacatatgaagcgcttcgt
cgggaacatgactcccagatagttcagattgccatggaggcaggcttgcgcattgcccca
gaccaatggtcttctcttctttatggagaccagtcacataaatctcacatgcagtctatt
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaactaacaattgct
cttcagaggactggtgatcctgcaaacctgaatcgcctgcgaccccatctggagctatta
gcaaatattgacccaagtccagatgcccctcctccaacctgggaacagctagaaaatggg
ttggttgctgtgcgcacagtggtacatggactggttgattatattcagaatcacagcaag
aaaggaacagaccagcagcagcctcctcagcacagcaagtataaaacttacatgtgccga
gacatgaaacagagaggagggtgcccccggggggccagctgcacatttgcacactcacag
gatgaattggaaaaatttcgtaaaatgaacaaacgtctggttcccagaagacccctgagt
gcctccttaggccagctcaatgaggtgggcctaccttcagcagctatcctttcagaagaa
ggggcagtggacctgcccagcagaaaacctactgccctgccgaatggaattgtgtcagca
gggaatgcagtgacccagctgatcccccgagggactgactccagctacgattctggcctg
aagccagggaagattgaccacctgagcagcagtgctcctggatcccctcctgacctactg
gaacctggacctaagaacatttctgccttacctgtgactccccactctgtaccccccagg
ggaccgacagacctgccttccatgccagttaccaaacctcttcctatggtaccacgaggt
tcccagctatactcagcacagcaagcagacgtattttatcaggatcctcgaggggctgct
cctccttttgagccagcaccatatccaccagggatgtactatactccaaccccacaatgt
gtctcccgctttgtccggcctccaccatctgctcctgaacctggccctccatatttggat
cattacccaccctacctccaggatcgtgtagtaaactcccagtatgggactcaaccccaa
cagtactcacccatgtacccaccacattatgatggtcgtcgtgtatactctactccgtct
tatccacgagaggagattttccaagaaagcccagtacccattgagattccacctgcaact
gtttcaccttatgtaccagagtccagagagagataccagcaaatagagggttattatcca
gtgggtccacatccaagtcagataagacctccgtatatcagagagccttacagcagacta
ccacctcctctccaggctcaccctagtctagatgagctacatcggaggcggaaggaaatc
atggcccaactagaagagaggaaagttatctccccacctccttttgcaccttcaccaacc
ttgccccattcattccatccagaggaatatttggatgatgacctgaaagttgctggaaaa
tacaaagggaatgattacagccaatattccccttggtcatgcgacaccatcggctcctac
attgggaccaaagatgcaaaacccaaagatgctgttgtccctggtggtgtggacatgacg
aatgtggatagtaaaagtgtcagagaccagaggctggagcttcagcgaagggtagcagaa
accagtgatgatgacctcatcccatttggtgatcgacccacagtgtctcggtttggtgcc
atatctcgaacttccaaaaccatgtatcagggttctggcccaatgcaggctctggcagct
cagggggcttccactaaatcaatcagcatttctgattacagtccatatggagctcatggt
ggctggggaggttctccatattcccctcaccaaactatgccttctcagggacacttcact
gaaagggagagattgtccatgtcagaagtggccagccatgggaagcccttaccctctgct
gagagagaacagctgagactagagttgcagcagctgaaccaccagattaaccagcacacc
cagcttcgaggacttgaggctgttagtaacaggctgctgttgcagagggaaaccaacact
ctggcaggccagccccctcctcagcctccaccaccaccccccaagtggcccggaatggtg
tcaagtgagcagttgagcttggagctacaccaggtggagagggaaattgggaaaagaact
cgggagctgagcctggagaatcaatcttctctggacatgaaaaataaattgggttccagt
aagcaagcagaaaatggacaggcagaaccacaaaacaaggtaccaactgaggaccttgcc
ttgacattcagcagtgaggtgccgaatggatcatccttatcacaagagaacatcagcctc
ctgtcaaacaagacatcctctttgaccctggctgaggatcctgagggaggaggagataac
aatgactctccgaggacgggagtcacgcccagctctgctccctaa
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integrated database retrieval system
