Sarcophilus harrisii (Tasmanian devil): 100926409
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Entry
100926409 CDS
T02286
Symbol
PSMD1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03050
Proteasome
shr05010
Alzheimer disease
shr05012
Parkinson disease
shr05014
Amyotrophic lateral sclerosis
shr05016
Huntington disease
shr05017
Spinocerebellar ataxia
shr05020
Prion disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100926409 (PSMD1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100926409 (PSMD1)
09164 Neurodegenerative disease
05010 Alzheimer disease
100926409 (PSMD1)
05012 Parkinson disease
100926409 (PSMD1)
05014 Amyotrophic lateral sclerosis
100926409 (PSMD1)
05016 Huntington disease
100926409 (PSMD1)
05017 Spinocerebellar ataxia
100926409 (PSMD1)
05020 Prion disease
100926409 (PSMD1)
05022 Pathways of neurodegeneration - multiple diseases
100926409 (PSMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
shr03051
]
100926409 (PSMD1)
Proteasome [BR:
shr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
100926409 (PSMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT
HEAT_EZ
PA26
Motif
Other DBs
NCBI-GeneID:
100926409
NCBI-ProteinID:
XP_031824012
Ensembl:
ENSSHAG00000004387
LinkDB
All DBs
Position
4:complement(455563182..455660471)
Genome browser
AA seq
953 aa
AA seq
DB search
MITSAAGIISLLDEDEPQLKEFALQKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRHFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPE
GERKPVDQRLEGIVNKMFQRCLDDHKYKQAVGIALETRRLDVFEQTILQSNDVPGMLAYS
LKLCMSLMQNKQFRNRVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGADKDSESMETD
EKPSHTFAGKSPEVNPEPKDQISKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPSFQLLDNPARVMPAQLKVLSMTDTCRY
QPFKPLSIGGIIIMKDTSEDLEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggccgctggaattatttctcttctggatgaagatgaaccacagcttaag
gagttcgcgctacagaaactgaatgcagtggtcaatgacttctgggcagaaatttcggag
tctgtggacaagatagaagtcttgtatgaagatgaaggttttcggagccggcactttgct
gcccttgtggcatccaaagtgttctatcacctaggcgctttcgaggagtctctgaactac
gccctgggagcaggcgatctcttcaatgtcaatgacaattccgaatacgtggagaccatt
atagccaagtgcatcgaccattacaccaagcagtgtgtggagaatgccgagctgcccgag
ggggagaggaagcctgtggaccagaggctggaggggatcgtcaacaagatgttccagagg
tgtttggatgaccacaagtacaagcaggccgtcggcatcgccctggagacccgccggctg
gacgtcttcgagcagaccatcctgcagtcgaatgatgtccccgggatgctggcttacagt
ctcaagctttgtatgtctctgatgcagaataagcagttccgtaatagagtcctaagagtt
ctggttaaaatttatatgaatttggagaagccggacttcatcaatgtttgccagtgcttg
attttcttagatgatcctcaggctgtgagtgatatcttggagaaactggtcaaagaggac
aacctcctcatggcatatcagatctgctttgacctctatgagagcgccagccagcagttc
ctgtcctccgtcatccagaacctccgtactgtcggcacccccatcgcttcagtgccgggc
tcaaccaatacagggactgtgcccggggctgataaagacagtgagagtatggaaacagat
gaaaaaccaagccacacatttgctgggaagtccccggaagtgaatccagaacccaaggac
cagatatcaaaaatgattaaaattttaagtggtgaaatggcgattgagttacatcttcag
tttttaatacggaataataacacagacctcatgattctaaaaaacactaaggatgcggtg
aggaattccgtatgtcacacggccacagtcatagccaactcgttcatgcactgtgggacg
accagtgaccagttccttagagataatttggagtggctcgccagagccacgaactgggca
aagtttactgcaactgccagtctgggtgtgattcataagggtcacgagaaggaagcatta
cagttaatggcaacctatctccccaaggatacctctccggggtcagcctaccaggagggc
ggaggtctctatgcattgggtctcattcacgccaatcatggtggtgacatcattgactac
ctgcttaaccagctgaagaatgccagcaatgatattgtacggcacggtggtagcttgggc
ctcggattggctgccatgggcactgcccgccaggatgtctacgatctgctgaaaacaaac
ctgtaccaggatgatgctgtgacaggagaagcagctggccttgccctgggcttggttatg
ttgggttcgaaaaatgcccaggctatcgaggatatggttggctatgcccaggagacccag
cacgagaagatcctgcgggggctggccgtcggcattgccttggtgatgtacgggaggatg
gaggaagccgatgccctcattgagtctttgtgccgggataaggacccgatcctccgtcgc
tctgggatgtacaccgtggccatggcttactgtggatccgggaacaacaaggccatccgg
cgcctgctgcacgtggcagtcagcgacgtcaacgacgatgtccgaagggccgcggtcgag
tccctgggcttcatccttttcaggacacctgaacagtgcccaagtgtagtttccttgttg
tcggagagttataaccctcatgttcgttacggagctgcaatggcgctgggtatctgctgt
gctggcacaggaaacaaggaagccatcaatttgctggagcccatgaccaatgaccctgtg
aactatgtgcggcaaggcgcgctcatcgcatcagctctcatcatgattcagcagacggaa
atcacttgtcccaaggtcaaccagttcagacagctgtattccaaagtcatcaacgacaag
catgatgatgtcatggcaaagtttggtgctatcctggcccagggcatcttagatgcaggg
ggccataacgtcaccatctccttgcagtctcggaccgggcatacccacatgccttccgtg
gtgggcgtcctggtcttcacccagttctggttttggttccctttatctcacttcctgtcc
ctggcttacactcctacctgtgtcatcggccttaacaaggacctcaagatgccaaaagtc
cagtacaagtccaactgcaaaccgtccacgttcgcatatcctgcacccctcgaggtgccg
aaagagaaggagaaggaaaaggtttctactgcagtgctctccatcaccgccaaggcaaaa
aagaaggaaaaagagaaagaaaagaaagaggaagagaaaatggaagtggatgaaactgag
aagaaggatgagaaggagaagaaaaaggagccggagccaagcttccagctgctggataac
cccgcccgagtcatgcctgctcagctcaaggtcctctccatgacagacacctgccggtac
cagccctttaagcctctttccatcggaggcattatcatcatgaaggacaccagcgaggac
ttagaagaactggtagagccagtggctgcccacggccccaaaatcgaggaagaggagcag
gagccagagccaccagagccgtttgagtatatcgacgactga
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