Sarcophilus harrisii (Tasmanian devil): 100926488
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Entry
100926488 CDS
T02286
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04080
Neuroactive ligand-receptor interaction
shr04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100926488 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100926488 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100926488 (TRPV1)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100926488 (TRPV1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
100926488
NCBI-ProteinID:
XP_031813228
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Position
3:927563..944498
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AA seq
863 aa
AA seq
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MSKSSADKAEIPNEPWEPSPGPPCPGTPDKAPAPKSQAFSAARSRSRGRLLGRCHSDEAS
AMDSHQEGEPAPCPIIQLSPMVERPLSDERSGPQPPQDPSAPASEKSLKLYDRKKIFEAV
AQGSCEELGDLLVYLQRSLKKLTDSEFKDPETGKSCLLKAMLNLHNGKNETIPLLLDIAR
QTGNLREFVNASYTDSYYKGQTALHIAIERRNVALVMLLVENGADVHAAAHGDFFKKTKG
RTGFYFGELPLSLAACTNQLAIVQYLLHNPHQAADIQAKDSVGNTVLHALVEVADNTAEN
TKFVTSMYNELLILGAKSQPALKLEEITNKKGLTPLALAAKSGKIGVLAYILRREIQEPE
CRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRL
LQDKWDRFVKRIFYFNFFVYSVYMVIFTCAAYYRPMGDRPPFQFDHSLGACFRVTGELLS
VLGGIYFFFRGESAGSVLCRGSWDGGGCPPPVGLCALQIQYFLHRRPSLKTLFVDSYSEV
LFFVQSLFLLISVALYFSHYKEYVAFMVFSLAMGWTNMLYYTRGFQQMGIYSVMIEKMIL
RDLCRFMFVYIVFLLGFSTAVVTLIEDRKNETETSCHGGRRFPGCKPCASSYNSLYSTCL
ELFKFTIGMGDLEFTENYDFKAVFIILLLSYVILTYILLLNMLIALMGETVNKIAQESKN
IWKLQRAITILDTEKSFLNCMRKAFRSGKLVQVGYTPDGREDFRWCFRVDEINWTTWNTN
LGIINEDPGNCEGIKRTLSFNLRSSRVSGKHWKNFPLVPLLRDGTSRDRRSNPPEEVQLR
PFSGSLRPEDAEVFKEPLALPPQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgagcgcagacaaggcagagattcccaacgagccgtgggaaccaagcccc
ggcccaccctgtccggggaccccagacaaagccccggcccccaagagccaggccttctct
gcggcccggagccggagccggggccgcctcttgggccgctgccactcggacgaggcttcg
gcgatggactcccaccaggaaggggagccggccccgtgccccatcattcagctcagcccc
atggtggaaaggcccctgagtgacgagcggtctgggccgcagccgcctcaggacccctcc
gcccccgcctcggaaaagtccctcaagctctacgaccgcaagaagatcttcgaggccgtg
gcccagggcagctgcgaggagctcggggacctgttggtctacctccagcgcagcctgaag
aagctcaccgacagcgagttcaaagacccggagaccgggaagagctgcctgctcaaagcc
atgctgaacctccacaacggcaagaacgagaccatccccctcctgctggacatcgcccgg
cagaccggcaacctgagagagttcgtgaacgccagctacaccgacagctactacaagggc
cagacagcgctgcacatcgccattgagaggcgcaacgtggctctggtgatgctcctggtg
gaaaacggcgccgatgtccacgccgccgcccacggggacttctttaagaaaaccaaaggc
aggaccggcttctactttggtgagctgcccctgtccctggcggcctgcaccaaccagctg
gccatcgtgcagtacctgctccacaacccccaccaggcggccgacatccaggccaaggac
tcggtgggcaacacggtcctgcacgcgctcgtggaggtggcggacaacacggccgagaac
accaagtttgtgaccagcatgtacaacgagctgctgatcctgggggccaagagccagccg
gcgctcaagctggaggagatcaccaacaagaaggggctcacgccgctggcgctggccgcc
aagagcggcaagatcggggtcctggcctacatccttcgccgagagatccaggagcccgag
tgcaggcacctgtcccgcaagttcaccgagtgggcctacgggcccgtgcactcgtccctc
tacgacctgtcctgcatcgacacctgcgagaagaactcggtgctggaggtgatcgcctac
agcagcagcgagacccccaaccgccacgacatgctgctggtcgagcccctgaaccggctc
ctgcaggacaagtgggaccgcttcgtgaagcgcatcttctacttcaacttcttcgtctac
tccgtgtacatggtcatcttcacgtgcgccgcttactaccggcccatgggcgaccggcct
ccctttcagttcgaccacagcctcggcgcctgcttccgcgtcacgggggaactgctgtcg
gttctggggggcatttacttctttttcagaggggaaagcgccggctctgtgctctgcaga
ggcagctgggatgggggaggctgccctccacccgtgggtctctgtgccctgcagatccag
tactttctgcaccggaggccttctctcaagactctgtttgtggacagctacagcgaggtg
ctcttctttgtccagtccctgttcctgctgatctcggtggcgctgtacttcagccattac
aaggagtacgtggccttcatggtgttctctctggccatgggctggaccaacatgctctac
tacacgcgcggcttccagcagatgggcatctactccgtcatgatcgagaagatgatcttg
agagacctgtgccgctttatgtttgtctacatcgtcttcctgcttggattttccacagcg
gtggtgacactgatcgaggacagaaagaacgagacggagacctcgtgccacggggggcgg
cgcttccccggctgcaagccctgcgccagctcctacaacagcctctactccacctgcctg
gagctcttcaagttcaccatcggcatgggggacctggagttcaccgagaactacgacttc
aaggccgtcttcatcatcctgctgctgtcctacgtcatcctgacctacatcctgctgctc
aacatgctcatcgccctcatgggggagaccgtcaacaagatcgcccaggagagcaagaac
atctggaagctccagagagccatcaccatcctggacaccgagaagagcttcctgaactgc
atgaggaaggccttccggtcagggaagctggtgcaggtgggctacactcctgatggcagg
gaggacttcaggtggtgctttcgagtggatgagatcaactggaccacttggaacaccaac
ctgggtatcatcaacgaggaccccggaaactgcgaagggatcaagcgcaccttgagcttc
aatttacgctccagccgagtttcagggaagcactggaagaactttcctctggtcccgctt
ttgcgggacgggaccagccgggaccggcgctccaaccctcccgaggaagtgcagctgaga
cccttctcggggtccctgaggcccgaagatgccgaggtcttcaaggagcctctggcgctg
cccccgcagtga
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