Sarcophilus harrisii (Tasmanian devil): 100926540
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Entry
100926540 CDS
T02286
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100926540 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shr03400
]
100926540 (RAD54B)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100926540 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Rubella_E1
Motif
Other DBs
NCBI-GeneID:
100926540
NCBI-ProteinID:
XP_003760306
Ensembl:
ENSSHAG00000017038
UniProt:
G3WXC9
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All DBs
Position
1:complement(574751460..574862631)
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AA seq
912 aa
AA seq
DB search
MRRSAAPSQLQGSLAKKLRFRPPGNISTSDLNEKIDKQGPNATFTEVGTTKNPLLRFQTD
SKICTSVLSAVTSEESVRSINDVDKSTGNYSFKATGKVSVDATNTALVAAEVAQLEEKEA
ISDHVTKYFSVVWRKVSKKKHKKWEGDAVLIVSGRSFTLKDLEGKDIGRGTGYKLKDLDS
LNEGEATVIGGKEIEVMGIISSDDYKSGRCFQSSLGSPCLTPSQITRKPFSNPVKSSCKS
NTKEKIVDDSPNFKPRHDPYAQNSFVMPRPDKSHQWIFNKNCLPLVDVVVDPYLVHHLRP
HQKEGIVFLYECVMGMRMNGRFGAILADEMGLGKTLQCISLVWTLLRQGLYGGKPIIKKT
LIVTPGSLVTNWKKEFQKWLGSERIKVFTVDQDHKIEDFVNSPLYSVLVISYEMLLRCLD
QIKNIKFDLLICDEGHRLKNSSIKTTTALVGLSCEKRVILTGTPIQNDLQEFYALIEFVN
PGILGSLSSYRKIYEEPIIASREPSATEEEKKLGEKRAAELTRLTGLFILRRTQEVINKY
LPPKIENVVFCRPGRLQIELYRKLLDSQAVRFCLQGVLENSPHLICIGALKKLCNHPCLL
FKSLKEKECNSSSDEYEEYNFSESLIDAYPADYNPLTFSETDSGKLHVLTKLLAVIHELS
PSEKVVLVSNYTQTLNILQEVCKRHGYNCSRLDGQTPVVQRQQIVDGFNSKHSSDFVFLL
SSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMARVWRDGQKHSVHIYRLLTTGTIEEKI
YQRQISKQGLSGAVVDLSKTSEHIQFSVEELKNLFTLHEDSDCVTHDLLDCECMGRKDHQ
AKPLEEVHTYRKCQLGPNHLKPDSKKPLSMSQLKQWKHFSGKYQNINDPFLERIKENVSF
IFQNITNQAPLT
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgagaagatctgcagcaccaagtcaattacaggggagtttagcaaaaaaactaagattt
agacctccaggaaatattagtacatcagatctcaatgagaagattgataaacagggtcca
aatgctacatttactgaggttggtacaactaaaaatcccctgctgcgttttcagactgat
tctaaaatttgtacttcagttctaagtgctgtgacttctgaagaatctgttagatcaata
aatgatgtggataagtccacaggaaattattcatttaaggcaactggaaaggtgtcagtg
gatgcaactaatacagcacttgtagcagcagaagtagcccagctagaagaaaaagaagcc
atatctgaccacgtgacaaaatatttcagtgttgtttggcgtaaagtttcaaagaagaaa
cacaaaaagtgggaaggtgatgctgtccttattgtgagcgggaggtcattcaccttgaag
gatctggagggcaaagacattggaagaggcactggatataaattgaaagatttggacagt
ttaaatgagggtgaagcaacagtgattggtggaaaagaaatagaggtcatgggtataatt
tcttcagatgattacaaaagtggtagatgttttcagtctagcttagggagcccatgcctc
acaccttcacaaattacccggaagcctttttctaatccagttaaaagtagctgcaaatcc
aacacaaaagaaaagattgtagatgattccccaaatttcaaacctcgtcatgatccatat
gcacaaaattcctttgttatgccacgaccagataaaagtcatcagtggatattcaataag
aactgtttaccacttgtggatgtagttgtagatccctaccttgtacatcatcttcgacca
caccaaaaagaaggaattgtgtttctttatgaatgcgtgatgggaatgagaatgaatggc
agatttggtgctattcttgctgatgaaatgggtttggggaaaacactgcaatgtatttcg
ctcgtctggacactcctgcgtcagggactctatggaggcaaaccaattattaaaaagaca
cttattgttacccctggaagtttagtgactaattggaaaaaagaatttcagaaatggtta
ggaagtgaaagaattaaagtgttcactgttgatcaggatcacaaaatagaagactttgtc
aactccccgctgtattcagtacttgtcatcagttatgagatgctgcttcgatgccttgat
caaattaaaaatataaaatttgatcttttaatctgtgatgaaggacatcgcttgaagaac
agttccattaagacaactacagcccttgttggcctgtcttgtgagaagagagtaattcta
actggtaccccaattcaaaatgatttacaggaattttatgcattaattgaatttgtgaat
ccaggaatactaggctctttgtcatcatatagaaaaatatatgaagaacccattattgca
tcccgagaaccttctgctacggaggaagaaaaaaaattgggagagaaaagagcagctgaa
ctcactcgccttactggactctttattcttagaagaacacaagaggtgataaataaatat
cttccacctaaaatagagaatgtagtcttctgcagacctggaagactacagattgaactt
tatcggaaactgttggattctcaggctgtcaggttttgtctgcagggggtactagaaaat
agtcctcatctgatttgtataggagctcttaaaaaactgtgcaaccacccctgtcttctc
ttcaaatctttaaaggaaaaagaatgtaactcatcttctgatgaatatgaagaatataac
ttttctgaaagcttgatagatgcctatcctgcggattacaaccctctcacattttctgag
acagattcaggaaaactacatgtcttgacaaagctgttagcagtaatccatgaactcagt
ccttctgaaaaggtagtactggtatctaattatacacaaaccctaaatattttacaagaa
gtctgcaagcgtcatggatataattgttcaagactcgatggacaaaccccagttgtacag
agacagcaaattgttgatggattcaatagcaaacactcatcagattttgtatttttatta
agttcaaaggctggtggtgtgggactaaaccttattggaggttctcatttaattttgtat
gatattgattggaatccagctactgatatccaggcaatggctagagtgtggcgagatggt
cagaaacattctgtacatatctacagacttctcacaacaggcacaattgaagaaaagatt
tatcaaagacagatcagtaagcaaggtctttctggggcagttgtagacctgtctaagaca
tctgagcatatccagttttcggtagaagaactgaaaaatttgttcaccttacatgaagat
tcagattgtgttacccatgatctactagattgtgagtgtatgggaaggaaagaccatcaa
gccaaacctttggaagaagtccatacatacagaaaatgccagcttggcccaaatcacctt
aaacctgactccaaaaaacccctttccatgtcacagctgaaacaatggaaacacttctct
gggaaatatcagaatattaatgatccctttcttgaaagaattaaagaaaacgtttctttc
atttttcaaaatataaccaatcaagctcctctaacataa
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