Sarcophilus harrisii (Tasmanian devil): 100926711
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Entry
100926711 CDS
T02286
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shr01009
]
100926711 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100926711 (VPS54)
Protein phosphatases and associated proteins [BR:
shr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100926711 (VPS54)
Membrane trafficking [BR:
shr04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
100926711 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Cas9_PI
Motif
Other DBs
NCBI-GeneID:
100926711
NCBI-ProteinID:
XP_031806416
Ensembl:
ENSSHAG00000000961
LinkDB
All DBs
Position
2:complement(107503923..107581114)
Genome browser
AA seq
974 aa
AA seq
DB search
MASSHSSSPVPQASSSDVFFKKEVDSAKHIRPVQSLPDVCPKEPTGDSHSLCDAPSLVAD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVTPSFYLPQISKEHFAMY
QQEISQREKIHERCKTICPPKDTFDRTLLLTPDKSRTDLEQVPKIFLKPDFALEDPLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSKAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEYVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQILEEERLVSLIFGLLKQRKLNFLEIYGEEMIITAKNIIKQCVINT
VSQIEEIDTEVVVKLADQMRLMNFPQWFDLLKDIFSKFTVFLQRVKATLNIVRSVVLSVL
DKNQRTRELEETSEQKNAAKDSSVDTEVAYLTHEGMFISDAFSEGELPPGITDTTSQRNA
SPSSEPCSSDSVSEPECTTDSSSSKEQISSLTPGGVELMVSEDMKLTDLELGKLANSIQE
LLYNASDICHDRSVKFLMARAKDGFLEKLNSSEFVALSRLMETFILDTEQICGRKSMSLR
GALQSQANKFVNRFHEERKTKLSLLLENERWKQAEVPAEFQDLVDSITDGKIALPEKKCG
EERKPADFLIVEGQPYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSR
SCQLVLGAGALQIVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSMLRHF
DHITKDYHDHIAEISAKLVAIMDNLFDKLLSKYEVKAPVPSTCFRNICKQMAKMHEAIYE
LLPEEQTQILFLRINASYKIHMKRQLSHLNVVNDGGPQNGLVTADVAFYTGNLQALKGLK
DLDLNMAEIWEQKR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaagcaagtagcagtgatgttttcttt
aaaaaggaggtagattctgctaaacatattcgacctgtacagtcactgccagatgtgtgt
cccaaggaacccacaggtgattcacatagtttatgtgacgccccatctctagttgcagat
caacatagatggactatttatcattccaaagtaaatcttccagcagcattaaatgatcct
agattagcaaaaagagaatctgatttcttcacaaaaacatggggtctagactttgtggac
acagaagtcacgccttcattctacctcccacaaatcagcaaagaacattttgcaatgtat
caacaggaaatctctcagagagagaaaattcacgagagatgcaagactatttgtcctcca
aaagatacctttgataggactctcttacttactcctgataaatccaggacagatctggaa
caagtacctaagatttttttgaaaccagattttgccttggaagatcccttaacatttaat
tcagttttaccatggtctcattttaacactgctgggggaaaaggaaatcgtgatgcagca
tcctcaaagttgcttcaagaaaagctgagccattatttggatattgtggaagtaaacatt
gctcatcagatctctctacgttcagaagcattttttcatgcaatgacctctcagcacgaa
ttgcaggactacctcaagaaaacttccaaggctgtaaaaatgcttcgagataaaattgca
cagattgataaagtaatgtgtgaaggatctctccacattttaagactggcacttaccaga
aataactgtgtaaaagtgtacaataaactgaaattaatggccactgtgcaccagactcaa
cctacagtacaagtgttgttatccacttccgaatatgttggagccttggacttaatagca
acaacccaagaagttctacagcaggaacttcagggcattcatagttttcggcacctagga
tcacaactttgtgaattagaaaaattgatagataaaatgatgattgcagaattttctact
tattctcatagtgatttaaatagaccactggaagatgactgtcaaattttagaagaggaa
agactagtatcacttatatttggacttttaaaacaaagaaaactcaattttttagaaatt
tatggtgaagagatgattatcacagcaaaaaatatcattaaacagtgtgtgattaataca
gtttcacagatagaagaaatagacacagaagttgttgtaaaacttgcagatcagatgaga
ttgatgaattttcctcagtggtttgatctcttaaaggatattttctctaagtttacggtg
ttcctacagagggttaaggcaacgttaaatattgttcgaagtgttgtcctctcagtcctt
gacaaaaatcaaaggactagggaactggaagagacttcagaacagaagaatgccgcaaaa
gacagttcagtagatacagaggtggcatatttaacccatgaaggtatgtttataagtgat
gcatttagtgagggtgagctaccacctggaataactgacactacctctcaaagaaatgca
tctccgagcagtgagccctgcagcagtgattcggtatccgaaccagaatgtactactgat
tcttcctccagtaaagagcaaatatcttctcttacaccaggaggtgtagagcttatggtc
agtgaggacatgaagttgactgacttagagctgggaaagctggcaaatagcatccaagag
ttgctgtataatgcttcagatatatgccatgatcggtcggtcaaatttcttatggcaaga
gccaaggatggctttcttgagaagttgaattcctctgagttcgtcgcgctttctcgatta
atggaaacatttattttagatactgaacagatctgtggacgaaaaagtatgtcattacgt
ggtgctcttcagagtcaagctaataaatttgtaaatagatttcatgaagagagaaaaacc
aaactcagtctcctgttagagaatgagcgatggaaacaagctgaggtacctgcagaattc
caggatcttgttgattccataacagatgggaagattgctttacctgaaaaaaaatgtgga
gaggagagaaaaccagccgacttcctgatagttgaaggacagccatatgctgttgttgga
acagtattgctattgataagaattatccttgaatattgccagtgtgtagataacatcccc
tctgttactactgacatgcttactcgtttgtcagatttattgaagtatttcaattcaaga
agttgccagttagttcttggagcaggggctttgcagatcgttggtttgaaaacaataact
acaaaaaacttagccctttcttcacgctgcctccagttaattgtgcactacattcctgtg
atccgagctcattttgaagctcgtctgcagcctaagcaatacagcatgctcaggcatttt
gatcatatcactaaggattaccatgaccatatagcagaaatctcagcaaaacttgtagcg
attatggataacttatttgacaaactgctatctaagtatgaggtgaaagctcctgttcct
tctacttgcttcaggaatatttgtaaacagatggcaaaaatgcatgaagctatatatgaa
ctccttccagaggaacaaacacagatactgtttttaagaattaatgcaagctacaaaatc
cacatgaagagacagttatctcatttaaacgttgttaatgatggaggacctcaaaatggg
ttggttacagcagatgtagctttttacactggaaatcttcaagccttaaaaggacttaaa
gatttggacctaaatatggctgagatctgggaacagaagaggtga
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