Sarcophilus harrisii (Tasmanian devil): 100926777
Help
Entry
100926777 CDS
T02286
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100926777 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shr01009
]
100926777 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100926777 (PCDH7)
Protein phosphatases and associated proteins [BR:
shr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100926777 (PCDH7)
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100926777 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
KIAA1549
LYRIC
Fibulin_C
MLANA
EphA2_TM
Adeno_E3_CR2
DUF6377
Motif
Other DBs
NCBI-GeneID:
100926777
NCBI-ProteinID:
XP_031798969
LinkDB
All DBs
Position
6:20124434..20591254
Genome browser
AA seq
1262 aa
AA seq
DB search
MLRMRTMGLARGWCCWCLCCFLLPVVSVTLAAAKQLLRYRLAEEGPADVRIGNVASDLGI
VTGSGEVTFSLESGSEYLKIDNMTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVI
GPSQSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGI
ERYELLQEPGGGGGGGGGGGEGRRGGASESAPHPGGGGGGGPGSSKRRPEAAEGGGGGGA
PGAGGRSTVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGEPPRSSQAIL
RVLITDVNDNSPRFEKSVYEADLAENSTPGTPILQLRAADLDVGVNGQIEYVFGAATENV
RRLLRLDETTGWLSVLHRIDREEVNQLRFSVTARDRGQPPKTDKATVVLNIKDENDNVPS
IEIRKIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPAS
DTEGDQNKKKYFLHTSAPLDYESTREYNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPV
FDQSVVEVYFPENNVPGERVATVAATDADSGKNAEIAYSLEPSVLGIFAIDPDSGDILVN
TVLDREQTDRYEFKVTARDKGVPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQP
NSPVGMVTVMDADKGRNAEMSLYIEEDGNIFSIENDTGTIYSTTAFDREHQTTYTFKVKA
VDGGDPPRSATATVSLFVMDENDNAPTVTFPSNVSYTLLPPSSNVRTVVATVLATDSDTG
VNADLNFSIVGGNPFKLFEIDATSGVVSLVGKLAQKHYGLHRLVVQVNDSGQPSQSTTTL
VHVFVNESVSNATVVDSQITRSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILI
ILIVVMARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTV
EASKPNGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTA
GKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNSKYSKQPFRRVTFSVVSQPQDP
HQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRP
LPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDERGSQEKLANGE
ASLMGDRNRNLLNKKLTSSYETFSAANFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREV
YL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatgcggactatgggcttggcgcgcggctggtgctgctggtgcctgtgctgt
ttcctcctgccggtggtctcggtcaccctggccgccgccaagcagctgctgaggtaccgg
ctggcggaggaaggaccggcggacgtccgcatcgggaacgtggcctccgacctgggcatc
gtgacgggctcgggagaggtgactttcagtctggagtcgggctccgagtacctgaagatc
gacaacatgacgggggagctgagcaccagcgagcgccgcatcgaccgcgagaagctgccc
cagtgccagatgatcttcgacgagaacgagtgcttcctggacttcgaggtgtccgtgatc
ggcccctctcagagctgggtggacctcttcgagggccgggtcatcgtgctggacatcaac
gacaacacccccaccttcccgtcgcccgtgctcaccctcacggtggaggagaaccggccc
gtgggcaccctctacctgctccccaccgccacggaccgagacttcggccgcaacggcatc
gagcgctacgagctgctccaggagcccgggggcggcggcggcggcggcggcggcgggggc
gagggccgccgcggaggggcgagcgagagcgccccccaccccgggggcggcggcggcggg
ggcccgggcagctccaagcggcggccggaggcggccgagggcggcggcgggggcggcgcg
ccgggcgccgggggccgcagcaccgtcttcgagctgcaggtggccgacacgccggacggc
gagaagcagccgcagctgatcgtcaagggggcgctggacagggagcagcgggactcgtac
gagctgaccctgagggtgcgggacgggggcgagccgccgcgctcctcccaagccatcctg
cgggtgctcatcaccgacgtgaacgacaacagcccccgcttcgagaagagcgtgtacgag
gccgacctggcggagaacagcacgcccggcaccccgatcctgcagctccgcgccgccgac
ctggacgtgggggtgaacgggcagatcgagtacgtgttcggggcggccacggagaacgtg
aggcggctgctgcggctggacgagaccaccggctggctcagcgtgctgcaccgcatcgac
cgcgaggaggtgaaccagctccgcttcagcgtcacggcccgggaccgggggcagcccccc
aagaccgacaaggccacggtggtgctcaacatcaaggacgagaacgacaacgtgccgtcc
atcgagatccgcaaaatcgggcgcatcccgctcaaggacggcgtggccaacgtggccgag
gacgtgctggtcgacacccccatcgccctggtgcaggtgtccgaccgagaccagggcgag
aacggcgtggtcacctgcaccgtggtgggggacgtgcccttccagctgaagccggccagc
gacacggagggggaccagaacaagaaaaagtacttcctgcacacttcggcccccctggac
tacgagagcacccgcgagtacaacgtggtcatcgtggccgtggactcgggcagccccagc
ctctcgagcaacaactccctggtggtcaaggtcggcgacaccaacgacaaccccccggtg
ttcgaccagtcggtggtcgaggtctatttccccgagaacaacgttcccggggagagggtg
gccacggtggcggccacggacgcggacagcggcaagaacgcggagatcgcctactccctg
gagccctcggtgctgggcatctttgccatcgaccccgactccggggacatcctggtcaac
accgtgctggaccgggagcagaccgacaggtacgagttcaaagtgacggcccgagacaaa
ggcgtcccggtcctgcagggcagcaccaccgtgatagtgcaggtggccgacaagaacgac
aacgaccccaagttcatgcaggacgtgttcaccttttacgtgaaagaaaacctgcagccc
aacagcccggtggggatggtcaccgtcatggacgccgacaaagggcgaaacgccgagatg
agcctgtacatagaggaggacggtaacattttttccatcgaaaacgacacgggcaccatt
tactccaccaccgccttcgaccgggagcatcagaccacttacaccttcaaagtgaaggcc
gtggacggaggggaccctcccaggtcggccacagccaccgtctccctttttgtcatggac
gagaacgacaacgctcccaccgtcacctttcccagcaacgtctcctacaccttactgccg
ccctcgagtaacgtcaggaccgtggtggccaccgtgctggccaccgacagcgacaccggg
gtcaacgcggacctgaactttagtatcgtgggagggaatcccttcaagctgttcgagatc
gacgccaccagcggggtggtgtccctagtggggaagctggcccagaagcattacggcttg
cacaggttagtggtccaggtcaacgacagcgggcagccttcccaatccaccacgactctg
gtgcacgtctttgtcaacgagagcgtctccaacgccaccgtggtggactcccagatcacc
cgaagcctgcacaccccgttaactcaagatatcgccggggaccccagctacgagatcagc
aagcagaggctgagcatcgtgatcggggtcgttgccgggatcatgacggtgatcctgatc
atcttgatcgtagtgatggcgaggtactgccggtccaagaataagaatgggtacgaggcg
ggcaagaaggaccacgaggacttttttaccccccagcagcacgacaaatctaaaaagccc
aaaaaggacaagaaaaataagaaatccaagcagcctctctacagcagcattgtgacagtc
gaggcttctaaaccaaacggacagaggtatgacagcgtcaacgagaagctctccgacagc
cccagcatgggacgctaccggtcggtcaacggaggcccggggagtcccgacctggcaagg
cattacaaatccagttctccgctgcctaccgtccagctccatcctcagtcgcccacggcg
gggaaaaaacaccaggccgtccaagatctgccgccagctaacacttttgtgggagcaggg
gacaacatttcaatcggatcagatcactgttctgagtacagctgtcagaccaatagcaag
tacagcaaacagccatttcgtagagtgacgttttctgttgtgagtcagcctcaggaccca
catcaggggtcattgcagagttgctatgacagcgggctggaggagtccgaaacaccaagc
agtaagagttcatcagggccaagactgggtgcccttccactcccagaggacaactatgag
aggactacgccggatggcagtgttggtgaggcagagcatatggaaaatgactcaaggcct
ctgccagatgtagccctgacagggaagtgcacccgagagtgtgatgaatatggtcactca
gactcctgctggatgccagtccgtacttcacctgaaaggaagcagaaaagccagccaaaa
ctctccacattcatgcccgtcgatgaacggggcagccaggaaaagctggccaacggagaa
gcctctctcatgggtgaccgcaacagaaacctccttaacaaaaagttgacctcatcctat
gagaccttcagtgcagctaatttcagcaaaaatgaggaagccaacccagaggatattccc
ctgacgaagacgggggaatacaagccatctcctgtcaacactctcactagaagagaagtt
tacctgtag
DBGET
integrated database retrieval system
