Sarcophilus harrisii (Tasmanian devil): 100926801
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Entry
100926801 CDS
T02286
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100926801 (CHD1)
03036 Chromosome and associated proteins [BR:
shr03036
]
100926801 (CHD1)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100926801 (CHD1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100926801 (CHD1)
SLIK complex
100926801 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
100926801
NCBI-ProteinID:
XP_031824050
Ensembl:
ENSSHAG00000010054
LinkDB
All DBs
Position
1:complement(194188224..194298322)
Genome browser
AA seq
1830 aa
AA seq
DB search
MRVPGSATIWRIFFLQFFLLPSFGLLIGICLWRKLTVLDQEEGSFCQSDDDSGSASGSGS
GSSSGSSSDGSSSQSGSSDSDSGSDSGSHSDSESDTSREKKVQSKPPKVDSSEFWKSNPS
ILAVQRSAMLRKQQQQQQQQQTSSNSGSEEDSSSSEDSEDESSSEVKRKKHKDEDWQMSG
SGSPSQTGSDSESEEEREKSSCDESESDYEPKNKVKSRKPQIRTKAKNGKKISGQKKRQI
DSSEDDDDDDDYDKRGSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDVPQPEEDEFETIE
RFMDSRIGRKGATGATTTIYAVEADGDPNAGYEKSKEPGEIQYLIKWKGWSHIHNTWETE
ETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERII
AHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQLRIDEYFSRNQSKTTPFKDCK
VLKQRPRFVALKKQPSYIGGPEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQ
TISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDINSRNMIRTHE
WMHLQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKS
NHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLL
RRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMEL
KKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLKERGNRVLIFSQMVR
MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS
ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL
VIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEI
LKRAETHENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSRNWEEIIPEDQRRRL
EEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRP
RTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNG
CVKALKDSSSGQDRTGGRLGKVKGPTFRISGVQVNAKLVISHEEELVPLHKSIPSDPEER
KQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDK
KPQAKQLQTRADYLIKLLNKDLAKKEAQRLSGAGNSKRRKIRTKKNKMVKTVKTREEIRS
DSSPLPSDKSDEDDDKDEITSVKHPNRKVKAEKDSEEKSEPDVCVKKEQEEKREAKEKEN
KRELKRERKEKEDKKDIKEKDIKEKRESKIKEAMQKDKDIKEEKLSETKSDSKEKSKKST
ISDAPVHITASGEPVPISEDSEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLE
HTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQ
DSQQNNDQNSSSMNTHMIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHKDRHQGDT
YKKNESRKRSYSSFSNGKDHREWDHYKQESRYYNDSKHRKMDDHRSRDHRSVLEGSLKDR
SHSEHRSHSDHRLHSDHRSSSEYSHHKTSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYG
SRSPLGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgccaggatcagccacaatttggaggattttttttcttcaattcttcctactt
ccttcttttggtctacttataggtatttgtctttggaggaagctaacagttctggatcag
gaagagggatccttctgccagtcggatgatgattctgggtcagcctctggttctggttct
ggatcaagctctggaagcagtagtgatgggagcagcagtcagtcaggcagcagtgattct
gattccgggtctgactcaggcagtcactctgattctgagtcagatacttctagagaaaag
aaagttcaatcaaaaccaccaaaagttgatagttctgagttttggaaatcaaatcctagt
attctggctgtccaaagatctgcaatgcttagaaagcaacagcagcagcaacaacaacaa
caaacttcctccaatagtggatcagaagaggattcctctagcagtgaagattctgaagat
gagtcatctagtgaggtcaagaggaaaaaacataaagatgaagattggcagatgtcaggg
tcaggatctccctcccagacgggttcagattctgaatcagaagaagaaagagaaaaaagc
agttgtgatgaaagtgaatctgactatgagccaaaaaataaagtcaaaagcaggaaacct
caaatcagaactaaagcaaaaaatgggaagaagatctctggccagaagaagagacagatt
gattcctctgaagatgatgatgatgatgatgattatgataaaagaggttctcgtcgccag
gctactgtcaatgttagttataaggaagatgaagaaatgaaaacggattcagatgattta
ttagaggtttgtggagaggatgttcctcaacctgaagaagatgaatttgagacaatagaa
aggtttatggacagtaggattggaagaaaaggagcaactggtgctaccacaaccatctat
gcagttgaagcagatggtgatcctaatgctggatatgaaaaatctaaggaaccaggagag
atccagtatttaattaagtggaaaggatggtcccatatccataatacttgggagactgaa
gaaaccttaaaacagcagaatgtgaaaggaatgaaaaaattagacaattacaagaaaaaa
gatcaggaaaccaaaagatggttgaaaaatgcttctccagaagatgtggagtattataat
tgtcagcaagaacttacagatgatctacataagcagtatcaaatagtggagagaataatt
gctcattccaatcaaaagtcagcagctggatatcctgattattattgcaaatggcagggt
ctcccatattcagagtgtagctgggaagatggggcccttatttccaaaaagttccagtta
cgcatagatgaatatttcagcaggaatcagtccaaaaccactccctttaaagattgcaaa
gtattaaaacaaaggccaagatttgttgcactgaagaagcaaccatcctatattggggga
ccagaaggtttagaattaagagattatcagttgaatggtctaaattggcttgctcattct
tggtgcaaaggaaatagctgtatacttgctgatgaaatgggccttggaaaaacaatacag
acgatctcatttcttaactatcttttccacgaacatcaattatatgggcctttcttgtta
gtagtaccactttctacacttacttcttggcaaagagagattcagacatgggctccccag
atgaatgctgtggtctatttaggggatattaacagcagaaatatgataagaacacatgaa
tggatgcatcttcagaccaaacggttaaaatttaatattcttttgacaacttatgaaatt
ttattgaaagataaggcattccttggtggcctgaattgggcattcataggtgtagatgaa
gctcatcgattaaagaatgatgactcacttttatataagaccttaatagactttaaatcc
aatcatcgtcttcttattacgggaacccctctacaaaattccctcaaagagctctggtcc
ttgcttcacttcatcatgccagaaaaattttcttcctgggaagattttgaagaagaacat
ggcaaagggagagaatatggatatgcaagtctccacaaggagctggagccttttctgtta
cgccgagttaagaaagatgtagaaaaatctttgcctgccaaagttgagcagattttaaga
atggaaatgagtgcattgcagaaacaatattacaaatggattttaaccaggaattacaaa
gcccttagcaaaggttcaaagggcagtacctcaggctttttgaatataatgatggagctc
aaaaagtgttgtaaccattgctacctcatcaaaccacctgataataatgaattctacaat
aaacaggaggccttacagcatttaattcgaagtagtggaaaattaattcttctcgataag
ctgttgattcggctaaaagaacgaggcaaccgagttctgattttctctcaaatggtgcgg
atgttagacatacttgcagaatatttgaagtatcgtcagtttccttttcaaagactagat
ggttcaatcaaaggagaattaagaaaacaagcattagatcattttaatgctgaaggatct
gaggacttttgtttcttactttccacgagggctggaggactaggcataaatttagcatct
gctgacactgttgttatatttgattctgactggaatccacaaaatgatcttcaggcacaa
gctagagcccatagaattggacagaagaaacaggttaatatttatcgtctagttacaaag
ggatcagttgaagaagatattcttgaaagagccaaaaaaaagatggtgcttgatcaccta
gtaattcagagaatggacacaactgggaagactgtactacatacaggttctgctccttca
agttctacaccttttaataaggaagaactatcagcaattttaaaatttggtgctgaagaa
ctttttaaagaacctgaaggagaagaacaagagcctcaggaaatggatattgatgaaatc
ctgaagagggctgaaactcatgaaaatgaaccaggtccattaactgtaggagatgaattg
ctttcccagtttaaggtggctaacttttcaaatatggatgaagatgatattgaattagaa
cctgaaagaaattcaagaaattgggaggaaatcattcccgaagatcaaagaagaaggcta
gaagaagaagaaagacaaaaggaacttgaagaaatatatatgctgccaaggatgagaaac
tgtgcaaaacagattagcttcaatggaagtgaaggccggcgcagcagaagtagaagatac
tctgggtctgatagtgattcaatatctgaaagaaaaaggccaaagaaacgtggaagacca
aggactatcccacgagagaatattaaaggatttagtgatgcagaaattaggcggtttatc
aagagttacaagaaatttggtggtcctctggaaagattagatgcaattgctcgagatgct
gaattagttgataagtcagagacagacctgagacgactaggggagctggtgcataatggg
tgtgtcaaagctttaaaggatagttcctctggacaggaccgaacaggtggtagacttgga
aaagtgaagggtccaacattccgaatatcaggagtgcaagtgaatgccaaactagttatc
tctcatgaagaagaattagtaccattgcacaaatcaattccttcagatccagaagaaagg
aaacagtataccatcccgtgtcatacaaaggcagctcactttgatatagactggggcaaa
gaagatgattccaatctattaataggtatctatgaatatggctatggcagctgggaaatg
attaaaatggatcctgaccttagtttaacacacaagattctaccagatgatcctgataaa
aaaccccaagcaaagcagttgcagactcgagcagactacctcattaaattacttaataaa
gatctagcaaaaaaagaagcccagagactttctggtgcgggaaattcgaagaggaggaaa
ataagaactaagaagaataaaatggtgaagactgttaaaacgagagaagaaataagaagt
gattcttctccattaccttcagacaaatctgatgaagatgatgacaaggatgagatcact
tctgtgaaacatccaaatagaaaagtaaaagcagaaaaagacagtgaagaaaaatctgag
ccagatgtttgtgtaaagaaggaacaagaagaaaaaagggaagcaaaagaaaaggaaaat
aagagagaacttaaaagggagagaaaagaaaaggaggataagaaagatataaaggaaaaa
gatattaaagaaaaaagagaaagcaaaataaaagaagctatgcagaaagacaaagacata
aaggaagaaaagctcagtgaaaccaaatctgatagcaaagaaaaatctaagaaatccaca
atttcagatgctccagttcatatcactgcaagtggggaaccagttcctatatctgaggat
tctgaagagctggatcagaagacattcagtgtatgcaaagaaagaatgaggcctgtcaaa
gccgccctaaaacaacttgatagacctgaaaagggactttcagaaagagaacagctggaa
catactagacagtgtctaatcaaaattggtgatcatatcactgaatgtctgaaagaatat
acaaatcctgaacaaattaaacagtggagaaagaatttgtggatttttgtgtccaagttt
acagaatttgatgcaaggaaactacacaaattatataagcatgcaattaaaaaacggcaa
gactctcagcaaaacaatgaccaaaacagcagcagcatgaatactcatatgattaggaat
ccagatgtggaaagactaaaagagaatacaaatcatgatgacagcagcagggacagttat
tcttccgatagacatttgtctcagtatcatgaccacaaagataggcatcaaggagatact
tacaaaaagaatgagtccaggaaaagatcatattcatcctttagcaatggtaaagatcac
cgggaatgggatcattacaaacaagaaagcagatattacaatgatagcaaacacagaaaa
atggatgaccatagaagtagggatcacagatcagttttggaaggaagcttaaaagaccga
tctcattctgagcaccgttctcattcagatcatcggttacactcagaccatcgatcaagt
tctgaatattcacaccataaaacttccagggattatcggtatcattcagattggcagatg
gaccacagagcttccagtagtggccctaggtcaccactagatcagaggtctccatatggc
tcaagatcacctttaggtcatagatctccatttgaacattcatctgatcacaaaagtaca
cctgagcatacttggagtagtcggaaaacataa
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integrated database retrieval system
