Sarcophilus harrisii (Tasmanian devil): 100927100
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Entry
100927100 CDS
T02286
Symbol
POU5F1
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100927100 (POU5F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100927100 (POU5F1)
03021 Transcription machinery [BR:
shr03021
]
100927100 (POU5F1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100927100 (POU5F1)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
100927100 (POU5F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
GAT
AcnX
Motif
Other DBs
NCBI-GeneID:
100927100
NCBI-ProteinID:
XP_003770572
Ensembl:
ENSSHAG00000002855
LinkDB
All DBs
Position
4:285575076..285584739
Genome browser
AA seq
344 aa
AA seq
DB search
MAGHLAPEYFSPPPGGGGAGGSEPTWNWSAFQGPLGGVGTGPGPDGWGMAPYHPLYDMWG
GGVYCEPQPNVGVMAQPAQEIAVPDGDAGPGVESPSEGSSPESRTTARVTKIEPVESGDE
QAQETPSPEELEQFAKELKRKRITLGYTQADVGITLGALFGKVFSQTTICRFEALQLSFK
NMCKLRPLLQKWLEAADDNDHLQELCKAETVLQQARKRKRTSIENGVRGNLETMFLQCPK
PTLQQISNIAEELGLEKDVVRVWFCNRRQKGKRSNSNSPREDFEAAGSFAGGPVPFPLAP
GPPFSHPSYGGPHFTTLYSPAPFTEGDAFSPLPVNTLGSTMHSS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggccggacatctggctcctgaatatttctcgccacccccgggcggtggcggggctggt
gggtccgagcctacgtggaattggtcggcctttcaaggcccactcggtggggttggaacg
gggccgggacccgacgggtggggcatggccccataccaccctttgtacgatatgtgggga
gggggtgtctactgtgaacctcagcccaatgtgggagtgatggctcagcctgctcaggag
atcgcagtccccgacggcgatgcaggaccgggggtagagagtccttccgagggcagctcc
ccagagtcccgtaccactgctcgagtcaccaagattgagccggtggagagtggagacgag
caggcacaagaaactccttcaccagaagaactggagcagtttgccaaggagctaaagcgg
aaaaggatcactctgggttatacccaggctgatgtgggcatcaccttgggggctctcttt
ggcaaggtttttagccagaccaccatctgtcggtttgaggcactacaactcagcttcaag
aacatgtgtaagctccgacctctgctacagaagtggctagaagcagctgatgacaatgac
caccttcaggagttgtgtaaggctgagacagtccttcaacaagccagaaagaggaagcgt
acaagcattgagaatggagttcggggaaacttggagaccatgtttctccagtgccccaag
cccacacttcaacagatcagtaatattgctgaggagctgggccttgagaaagatgttgta
cgggtttggttctgtaatcgtcgtcaaaagggcaagcggagcaatagcaactcgccccga
gaagattttgaggcagctggctccttcgctggaggacctgtgccttttccccttgctcca
ggccctccattcagtcatcccagttatgggggccctcatttcaccactctctattcccca
gcccccttcacagagggggatgcattttcccctctccctgttaacactctgggctcaacc
atgcattcaagctaa
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integrated database retrieval system
