KEGG   Sarcophilus harrisii (Tasmanian devil): 100927169
Entry
100927169         CDS       T02286                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100927169 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shr03021]
    100927169 (TAF5L)
   03036 Chromosome and associated proteins [BR:shr03036]
    100927169 (TAF5L)
Transcription machinery [BR:shr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100927169 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     100927169 (TAF5L)
Chromosome and associated proteins [BR:shr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100927169 (TAF5L)
    STAGA complex
     100927169 (TAF5L)
    TFTC complex
     100927169 (TAF5L)
    SAGA complex
     100927169 (TAF5L)
    SLIK complex
     100927169 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin ANAPC4_WD40 DSE1_N Beta-prop_SCAP WDR90_beta-prop_4th CFAP251_N Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_NOL10_N PAC11 Beta-prop_VPS8 Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st ASA1 WD40_RFWD3 PEP5_VPS11_N Ge1_WD40 PROPPIN eIF2A Beta-prop_IP5PC_F Beta-prop_NWD2_C Nbas_N PD40
Other DBs
NCBI-GeneID: 100927169
NCBI-ProteinID: XP_031822754
Ensembl: ENSSHAG00000014601
UniProt: A0A7N4V274
LinkDB
Position
4:366030289..366057125
AA seq 588 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLSQTPEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDVIEQLQTTLTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNSALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSESNGLEPADMPTSILQNEAALD
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDNKLLAAGFDNSCVKLWSLRSK
KLKSEPHQVDISRIRLACDVLDEEEDDDDMGTEMKILRGHCGPVYSTRFLSDSSGLLSCS
EDMSIRYWDLGSFTNTVLYRGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLRI
YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGK
YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN
TYCNAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgaaacgagtacgcacagaacagattcagatggcagtgtcctgctacctcaaacgacgt
caatatgtagattcagaaggtcctctaaaacaaggattgcggttgtctcagactcctgaa
gagatggcagctaatctcacagtccaatcagagtctggttgtgccaatatagtgtctgca
gccccctgccaggctgagcctcagcaatatgaagtacagtttggtcgattacggaatttt
ctcactgattctgattcccagcacagccatgaagtgatgcctctcctatatcctctcttt
gtctacctccatcttaacatggtccagaatggcctgaagagcacagtggacagtttttac
agtcgcttccatggaatgtttttgcagaacgccagccagaaggatgtcattgagcagcta
cagaccactctgaccattcaagacatcctgtccaacttcaaactccgggcattcctggat
aacaagtatgtggtccgcctccaagaggacagctacaattaccttatccgctacctccaa
agtgacaacaacagtgccctgtgcaaagttctcaccttacacattcatcttgatgtgcag
cctgccaagagaacagactaccagctatatgccagtggcagctcctcacgaagtgagagc
aatggactggagccggcagatatgcccacatctattttgcagaatgaggctgctctggat
gtcctgcaagagagcattaagcgagttaaggatggacccccttcacttaccacaatttgt
ttctatgccttctataacactgagcaattgctgaatactgcagaaatctccccagacaac
aagttgctagctgctgggtttgataattcctgtgtaaaactttggagcttgagatccaag
aagttaaaatcagagccccatcaggtggacatctcccgtattcgtttggcttgtgatgtt
ctggatgaagaggaagatgatgatgacatgggcacagaaatgaagatcttgcgagggcat
tgtgggcccgtgtatagtacaaggttcctatcagacagctcagggttgctatcttgctcc
gaagatatgtctattagatactgggaccttggaagttttaccaatactgtattataccga
ggacatgcctatcctgtctgggatctggatatcagtccgtgcagcctatacttcgcaagt
ggttcccatgaccgcactgcaagactctggtcatttgatcggacgtacccattgcgaata
tatgcaggacatctagcagatgtggactgtgtaaaattccaccccaattcaaactactta
gctacaggctcaactgataaaactgttcgcctttggagtactcagcaaggaaattctgtg
aggctcttcactggtcaccggggccctgtgctttcacttgcattttctccaaatggtaag
tacttggcctctgccggtgaggatcagcggttgaagctgtgggacttggcatctggtacc
ctctacaaagaattgagaggccacacggacaatatcaccagccttactttcagcccagat
agtagcttgattgcctctgcatccatggataactctgttcgggtttgggatattcggaac
acttattgcaatgctcctgcagatggttcttccagtgaacttgttggtgtatatactggg
cagatgagtaatgtactgagtgttcagtttatggcctgtaaccttcttctagtgactgga
attacacaagaaaatcaggaacattaa

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