Sarcophilus harrisii (Tasmanian devil): 100927357
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Entry
100927357 CDS
T02286
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100927357 (MSH4)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100927357 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
nSTAND_NTPase5
IL2RB_N1
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
100927357
NCBI-ProteinID:
XP_031824721
Ensembl:
ENSSHAG00000006959
UniProt:
A0A7N4V0K1
LinkDB
All DBs
Position
4:complement(2128626..2192739)
Genome browser
AA seq
1035 aa
AA seq
DB search
MSRPWARPPSHSRPGNFLTPARSARPPGPRCRSEPRPPPVWGSAQRALAFPAGCGSWSGP
GPGSGPGGSSSPVSGPGPGGSSPVSVLGPARWSSPVSGPGPARWSSPVSGPGPGPGGSSS
PVSGPLRWSSSSPSPRGGAPGRERDSYFGDKSSFAENTSAFNFTSVASSSSARDGSFAQT
IKTPLAFGNPPRSGYRSKTPQMGHSATSSSAVSAHAGASAIVALVEGRGLARGEIGIASI
EERSPQLVLSQFSDSTTYTKVITKLKILAPLEIIMSNTACVVGNPTKLFTLITENFKNVT
FTTIQRKYFNETKGLEYIEQLCAAELSTVLMEVQSKYYSLAAVAALLKYMEFIQNSVYAP
KSLKVCFQGSEKTVMIDSSSAQNLELLVNNHDYRSGHTLFGVLNYTKTPGGSRRLRSNIL
EPLTDVETINMRLDCVEELLQEEELFFGLQSVISKFLDTEQLLSVLVQIPKQETVKASES
KITNLIYLKHTLELVDPLKAVLKKCNTPLLKAYYSSLEDNRFGKILEKIKTVVNDDVRYV
KGCLNMRTQKCYAVKANINEFLDIARRTYAEIVDDIAGMIMQLAEKYALPLKTSFSSARG
FFIQMNLDCALLPGGQLPSEFIKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYMVV
CQLLGEIYPLVHCLYKLSDVVSMLDMLLSFAHVCTLSDYVRPEFTDTLAIKQGWHPILEK
ISMEKPVANNTYITEGSNFVIVTGPNMSGKSTYLKQIALCQIMAQIGSFVPAEYSSFRIT
EQIFTRISMGDDIETNSSTFMKEMKEIAYIVHNANDRSLILIDELGRGTNPEEGVGICYA
VCEYLLSLKAFTLFATHFLELCEMDLLFPNVENIHFEVEHVRSPGRSRESVTYTHKLSKG
QTEEKNYGIQAAEVSSLPPSIISEAKEIRVQITRQLMERQSQSSSPEAARKRAVYQLATR
LLQAARNSRLDSESLRLYLRGLKSKFEADLSGPGSKEPEAREATSPSQGPEEEQQHHMVN
FTQSTELGTDLSLTG
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggccctgggcccggcccccctcgcactcgcggccggggaacttcctcacgccc
gcgagaagcgcccggccgccgggcccccgctgcagatcggagccccggccgccgccggtc
tggggctccgcccagcgcgccctggccttccccgccggctgcggctcctggtcggggccc
gggcccgggtccgggcccggcggcagcagcagccccgtgtcggggcccgggcccggcggc
agcagcccggtgtcagtgttggggcccgcgcgctggagcagccccgtgtcagggccgggg
cccgcgcgctggagcagccccgtgtcagggccggggcccgggcccggcggcagcagcagc
cccgtgtcggggcccttgcgctggagcagcagcagccccagcccgcggggcggcgcccct
gggagagagcgagattcatactttggggacaaaagttcttttgcagaaaatacaagtgca
tttaattttacatctgttgcaagttcatcttcggcaagagatggcagttttgctcaaaca
ataaagacgccgttagcttttggcaatcctcccagatcgggctacagaagtaagacacct
caaatgggacattcagccacgtcgtcttccgcagtctccgctcatgccggggcctccgcc
atcgtggccctcgtggaagggaggggccttgccaggggcgagatcgggatagcgagcatc
gaggagagaagtcctcagctggtcctgtcccagttttctgacagcacgacctacaccaag
gtaattactaagctaaaaattttagcaccactggaaataataatgtcgaacactgcctgt
gttgtggggaatccaacgaagctcttcaccttaattacagagaatttcaagaatgtgact
ttcaccacaattcaaaggaaatacttcaatgaaaccaaagggttagaatacatcgagcag
ttgtgtgcggcagagctcagcactgtcttaatggaggtccagtccaagtattactctctg
gcagctgttgcagccttgctgaaatatatggaatttattcaaaattcagtttatgcacca
aagtctttgaaggtttgtttccagggcagtgagaagacagtcatgattgattcctcatca
gctcaaaaccttgaactattagttaataatcacgattacaggagcggtcacactctcttt
ggtgttctaaattacactaaaacacctggagggagtcggagacttcgttctaatattcta
gaacctctgactgatgtggaaacaatcaacatgagactagactgcgttgaggaacttctt
caggaggaggaactcttttttggtcttcagtcagttatttcaaaatttctggacacagaa
cagctgctttcagttcttgtacaaataccaaagcaagaaacggtaaaagcatctgaatcc
aagataacaaatttaatttacctaaagcatactctggaacttgtggatcctttaaaggca
gtgctgaagaagtgtaatacgcccctgttgaaggcttactacagttccttagaagacaac
aggtttggaaaaatacttgaaaaaattaaaacagttgtgaatgatgatgtgagatacgtg
aaaggctgcctgaacatgaggactcagaagtgctacgccgtgaaggcgaacataaacgag
ttcctggacattgccagaaggacgtacgccgagatcgtggacgacatagcgggaatgata
atgcaacttgccgagaaatacgctctccctctgaagacgagttttagctccgctcgagga
tttttcatccaaatgaacctggattgtgcgttgctccccggtggccagctcccctccgag
tttattaagattaccaagatgaagaacacatacagcttcacgtcggcggatctgattaaa
atgaatgaaagatgccaagagtcactgcgagaaatctaccacatgacttacatggttgtg
tgccagctgcttggtgagatttatcccctcgttcactgcctctacaaactttccgacgtc
gtgtccatgctggatatgttgctgtcgtttgctcatgtctgcactctgtccgattatgtt
cgccccgaattcacggacacattagccatcaaacaaggctggcatcctatccttgagaag
atatccatggaaaagcctgtggctaacaacacgtacatcaccgagggcagcaacttcgtg
atcgtcactgggccaaacatgagcgggaagtcaacttacttaaagcaaattgccctttgt
cagatcatggcccagatcggttcatttgtcccagcagaatactcttcatttagaatcact
gaacaaattttcaccagaatcagtatgggtgatgatatagagacaaattcatcaacgttt
atgaaggaaatgaaagagatagcatatatagtacataacgctaacgacagatcactcatc
ttaattgatgaacttggcagaggcactaatccagaggaaggcgttggcatttgttacgca
gtctgtgaatatctgctgagcttgaaggcatttacattgtttgccactcatttcctggag
ctctgtgagatggacctcttgtttcccaatgttgaaaatatccattttgaagttgagcat
gtcagaagccctggaagaagcagagagtccgtcacgtacacccacaaactctcaaaagga
caaacggaagaaaagaattacgggatccaggctgcggaggtctcctcgctcccgccatcc
atcatttcggaggccaaagagatccgagttcagatcaccagacagctcatggaacggcag
agccagagcagctctcctgaagccgcccggaagagggccgtgtaccagctggccaccagg
ctccttcaggccgcccgaaattcccggctggattcggagagcttgcgcctgtacctgaga
ggcctcaagtccaagtttgaagcagacttgtctggaccaggatccaaagagcctgaagcc
agagaagctacatccccaagccagggacctgaggaggagcagcagcatcacatggtgaac
tttactcaatccactgagctcgggacagatttgtctctaacaggatga
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integrated database retrieval system
