Sarcophilus harrisii (Tasmanian devil): 100927387
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Entry
100927387 CDS
T02286
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shr03016
]
100927387
Transfer RNA biogenesis [BR:
shr03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
100927387
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_17
TPR_14
TPR_11
TPR_12
TPR_CcmH_CycH
RMD1-3
TPR_19
TPR_7
CFAP70_TPR_C
TPR_16
TPR_15
CFAP70_mid_TPR
TPR_Psidin_N
TPR_10
TPR_MalT
TTC22_C
CNOT10_TPR
ARM_TT21_4th
TPR_6
HAT_Syf1_M
PPR
TPR_Slam
ARM_TT21_C
HAT_PRP39_C
ARM_TT21_5th
TTC22_N
ANAPC3
Motif
Other DBs
NCBI-GeneID:
100927387
NCBI-ProteinID:
XP_003758968
Ensembl:
ENSSHAG00000002618
UniProt:
G3VIF4
LinkDB
All DBs
Position
2:583449073..583455219
Genome browser
AA seq
480 aa
AA seq
DB search
MSQMPRNSLKIILRQLKCHFTWNLLKEDIDLLNLEDTIIDQIEFLDMKSKVTLYNLLAYV
KHLKGQNEEALRCLKHAEERIQVEHADQVEVRSLVTWGNFAWVYYYMERFPKAQFYADKV
QKGYRKLPNSSRYKIECPEVYCEEGWALLKCGRKYYERAKACFEKALKIEPDNPEFNSGF
AIAAYRLDDKEYSCQRVSSLDPLRRAVELNPDNTFVMALLALKLQDLKQEAEGERYIREA
LEKMSSQPYVLRYAAKFYRRQNSPSKALQLLKIALQATPTSAFLHHQIGVCYKVLMILVK
QSTKKRPREKEKEKRELIQSAIFHFRAAMEQNSMFVFAYTDLANMYAEAGQYEKAEDVFQ
KALHLQHVTDENKQQVHFHYGRFQETHRKSEDAAIHHYLEGVKIKVESSITSKLISALQR
LATRRLYENAVDVKSWGALGFIHKLKGQKRQAIECYQRALKLDPENGDYISALFELRLSF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaatgcctagaaattccttaaaaattatcctgaggcagctgaaatgccatttt
acgtggaacttgttgaaagaagacatcgatctacttaatctggaagacacaataatcgac
cagatcgaattcctggatatgaaatccaaagtcaccctttataatctattggcctatgta
aaacatttgaaaggtcaaaatgaggaggccctgagatgcttaaaacatgctgaagagaga
atccaggtagaacatgctgaccaagtggaagtaagaagcctggtcacgtggggaaatttt
gcctgggtatattattatatggaaagatttcccaaagctcagttttatgcagacaaggtg
caaaaaggctataggaagcttcccaattcctcccgctataagatagaatgccctgaagtt
tactgtgaggaagggtgggctctgctaaagtgtggaaggaagtattatgagagggccaag
gcatgttttgagaaagccttgaagatagaacccgacaatcctgagtttaattctggcttt
gccatcgcagcctatcgactggacgataaggaatattcttgtcaaagagtatcatccttg
gaccctctccggagggcagttgaactgaatccagacaacacatttgtgatggccctactc
gccctgaagcttcaagacctaaaacaggaagctgagggcgaacgatacattcgggaggcc
ttggagaagatgtcctcacagccttacgtccttcgctacgcggcgaaattttaccgccga
caaaactcccccagtaaagctcttcagctcttaaaaatcgccttgcaggcaacacccact
tctgctttcttgcatcatcagatcggggtttgctacaaagttctgatgatcctcgtcaaa
cagtcaaccaaaaaacgacccagggagaaagaaaaagagaaacgagagctgattcaatcg
gccatatttcattttcgagcagccatggagcagaattccatgtttgtgtttgcttacaca
gacctggccaacatgtacgcagaggccggtcagtatgaaaaggcagaagatgtatttcag
aaagcccttcacctgcagcacgtgacggacgaaaacaagcaacaggtccattttcactat
ggtcgctttcaggagactcacaggaaatctgaggatgccgccatccatcactatttagaa
ggcgtaaaaataaaagtggagtcttctattacatccaaactgattagtgctctgcagaga
ttggccacgcggcgactttatgagaatgcagttgatgtaaagagctggggggccctgggt
ttcattcataagctaaagggacaaaagaggcaagccatcgagtgctatcagagagccctg
aagctggacccggagaacggggactatatcagtgctctgtttgagctgaggctctccttc
tga
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