Sarcophilus harrisii (Tasmanian devil): 100927438
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Entry
100927438 CDS
T02286
Symbol
CNTNAP2
Name
(RefSeq) contactin-associated protein-like 2
KO
K07380
contactin associated protein-like 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecule (CAM) interaction
shr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100927438 (CNTNAP2)
04517 IgSF CAM signaling
100927438 (CNTNAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shr04990
]
100927438 (CNTNAP2)
Domain-containing proteins not elsewhere classified [BR:
shr04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
100927438 (CNTNAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
COLFI
hEGF
Syndecan
MARVEL
Motif
Other DBs
NCBI-GeneID:
100927438
NCBI-ProteinID:
XP_031797107
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All DBs
Position
5:195598290..198230755
Genome browser
AA seq
1324 aa
AA seq
DB search
MVMVSRTGCGAALFLWILSSISCRAWTASSTSQKCDEQLVSALPHVVFSSSSSMSSSYSP
GYAKLNKRGGAGGWSPSDSDHYQWLQVDFGNRKQISAIATQGRYSSSDWVTQYRMLYSDT
GRNWKPYHQDGNIWAFPGNINSDGVVRHDLQHPVIARYVRIVPLDWNGEGRIGLRIEVYG
CSYWADVINFDGHVVLPYRFKNKKMKTLKDVIALKFKTSESEGVIFHGEGQQGDYITLEL
KKAKLVLNLNLGSNQFGSIYGHTSVMTGSLLDDHHWHSVIIERHGRNINLTLDRHLQHFR
TNGEFDYLDLDYEITFGGLPFSGKPSSSSRKNFKGCMESINYNGNNITDLAKRKKLEPSN
VGNLSFSCVEPHTVPVFFNATSYLEVLGRPNQDLFSVSFRFRTWNPNGLLLFSNFADGLG
NVEIDLTETKVGVRINITLNKKNQIDISSGSGLNDGQWHEVRFLAKENFAVLTIDGDEAS
AVRTNSPLQVKTGEKYYFGGFLTQMNTSDHSVLQPSFQGCMQLIQVDDQLVNLHEIEQRK
PGSFANVSIDMCAIIDRCVPNHCEHGGKCSQTWDSFKCTCDGTGYSGATCHNSIYELSCE
AYKHLGKTSNFYWIDPDGSGALGPLKVYCNMTEDKVWSTVNHDLQKQTPVVGYGPEKYSV
VQLNYSASMDQITAITSSAEYCEQFVSYSCKMSRLLNTPDGSPYTWWVGKANEKHYYWGG
SGPGIQKCACGIERNCTDSRYYCNCDADHKQWRKDVGLLSYKDHLPVSQVVVGDIDRPGS
EAKLTVGPVRCQGDRNYWNAASFFTPSSYLYFSTFQGETSADISFYFKTSAADGVFLENL
GNTDFIKLELKSATEVSFSFDVGNGPVEIVVRSPSPLNDDQWHRVIAERNVKQASLQVDQ
LPQQVRKAPTEGHTRLELYSQLYVGAAGGQRGFLGCIRSLRMNGVTLDLEERAKVTLGVK
PGCSGHCTSYGMYCENGGKCVEKYNGYSCDCSKTAYDGPFCIKDVGAFFEEGMWLRYNFQ
APGTKDAPNRSGSSPDTQNSMPDLAKEELSFSFSTTKVPCILLYVSSQTTDFLAVLVKPS
GNLQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRNEKDIILQLDHYSPVSYSLPSSS
DTLFNSPKALFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFNQIAPLKAALRPTNASSQ
VHIQGELVESNCGASPLTIPPMSAATDPWHLDSASADFPYNAGQAIRDGVNRNSAIIGGV
IAVVIFTILCTLVFLIRYMFRHKGTYHTNEAKGAESAESADAAIMNHDPNFTETIDESKK
EWLI
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggtctcgcgaaccggctgcggggcagctctgttcctttggattttgagcagc
atcagctgcagagcctggacagcgtcttccacttcccaaaaatgtgatgagcaacttgtc
tctgcattgcctcatgtcgttttcagcagttcatcttccatgtccagcagttattctcca
ggctatgccaagctcaataaaagaggtggagctggaggatggtctccctcagacagtgat
cattaccaatggctgcaggttgattttggcaataggaagcagatcagtgccattgcaacc
caaggtagatatagcagctctgattgggtgacccagtatcgaatgctctacagtgataca
ggaaggaactggaaaccatatcatcaagatgggaatatctgggcatttccaggaaatata
aactctgatggtgtagtccgccatgatttgcaacacccagtcattgcccgttatgtccgc
atagtgcccttagactggaatggagaaggtcggattgggctgagaattgaagtctatggg
tgttcttattgggccgatgttatcaattttgatggccatgttgtattaccgtacagattc
aagaacaagaagatgaaaactctgaaagatgtcattgctttgaaatttaaaacctctgag
agtgaaggggtaatcttccatggagaagggcagcaaggagattatattaccttggaactg
aaaaaagccaaactggttctcaacttaaacctggggagcaaccaatttggttccatatat
ggccatacatctgtgatgacaggaagtttgctagatgatcaccactggcattctgttatc
attgaacgccatggacggaacatcaacctgactctggataggcatttgcaacattttcgg
acgaatggagaatttgattatctggacttggattatgagataacctttggaggtctgcct
ttttctgggaagccaagttccagcagtagaaagaatttcaaaggatgcatggaaagcatt
aactacaatggaaataatatcactgatcttgccaagaggaagaaattagagccttccaat
gtgggaaatttaagcttttcttgtgtggagccacatacagtccctgtgttcttcaatgcc
acaagttacctggaggtacttggccgccccaaccaggacctattttcagtcagcttccgt
ttcaggacatggaatcccaatggccttcttctcttcagcaattttgcagatggtttaggg
aatgtggagattgaccttactgagaccaaagttggtgtccgtatcaacatcacattaaac
aaaaagaatcaaatcgacatttcctcaggttctgggctaaatgatggacaatggcatgaa
gttcgtttcctagctaaggaaaattttgctgttctaaccattgatggtgatgaagcatca
gcggttcgaactaacagtcctcttcaagttaaaacaggagagaagtattactttggaggt
tttcttacacagatgaatacttcagatcattctgtactacaaccttccttccaagggtgt
atgcagctcattcaagtggatgatcagctagtcaatttacatgaaatagaacaaagaaag
ccgggcagctttgctaatgtcagtattgacatgtgtgccattatagacagatgtgtgccc
aatcactgtgagcatggtggtaaatgctcccaaacctgggatagcttcaagtgcacttgt
gatgggacaggatacagcggggccacctgccataactctatctatgaactctcctgtgaa
gcttataaacacctgggcaaaacctcaaatttttattggattgatcctgatggcagtggg
gctctggggcctctgaaagtctactgcaacatgacagaagataaagtgtggtcaactgta
aatcatgacttgcagaagcagactcctgtggtcggctatggcccagaaaaatactcagtg
gtacagctcaattacagtgcctccatggatcaaatcacggccatcaccagcagtgcagag
tattgtgagcagttcgtctcctattcttgcaagatgtcaaggctgttgaacaccccagat
ggaagcccttacacctggtgggttgggaaagccaatgaaaagcattactactggggtggc
tccggacctggaatccagaaatgtgcgtgtggtattgaacgaaactgtactgattcaaga
tattactgtaattgtgatgctgaccataagcagtggagaaaggatgttggcttattatcc
tacaaagatcatttgcctgtcagccaggtggtagttggtgatattgaccgacctggttct
gaagccaaactgactgtgggtccagtacgctgccaaggagaccggaattactggaatgct
gcctcattctttacaccatcatcctacctttacttctccactttccaaggggaaacaagt
gctgacatctctttctacttcaaaacttcagctgctgatggagtgtttctggagaatctg
gggaatacagatttcatcaaacttgagctgaaatctgccacagaagtgtccttctccttt
gatgttggaaatgggccagtggagattgttgtcagatctccttctcctcttaatgatgac
cagtggcatcgggtcattgctgagagaaacgtcaagcaggcaagtctccaggtggaccag
ttgccacaacaggtgcggaaggcacctacagaaggtcacacacgcctagagctttacagc
cagctatatgtgggtgctgcaggaggtcagaggggatttctgggttgcattcgctccctc
aggatgaatggggtgacccttgatttggaagaaagagcaaaggttactctgggagtgaaa
cctgggtgctcaggtcattgcaccagctatggaatgtactgtgagaatggaggcaaatgt
gtggagaagtacaatggttactcctgtgattgttccaagactgcctacgatggaccattt
tgcataaaagatgttggagctttttttgaagagggaatgtggctacggtataacttccaa
gcaccaggaaccaaggatgcccccaatcgaagtggcagctctccagacactcagaactcc
atgcctgacctggccaaggaagagctcagttttagcttcagcaccaccaaggttccctgc
atcctcctctacgtcagctcccaaaccacagacttcctggcagttctggtgaaaccctct
ggaaacttacagattcgttacaacttgggaggcaccagagagccatataatattgatgta
gaccaccgaaacatggcaaatggacagcctcacagtgttaacatcacccgtaatgaaaag
gacataattctccagcttgatcattactctccagtgagttacagcctgccaagttcatct
gacacactgttcaattctcctaaggctctctttctaggaaaagtgatagaaacagggaag
attgaccaagaaatacataagtacaacacaccaggattcactgggtgtctttccagagtg
caattcaaccaaattgctcctctcaaggcagccctgagaccaacaaacgcctcttctcaa
gtccatattcaaggggaactggtagagtccaactgcggagcttccccactgaccatccca
cccatgtctgctgctactgatccttggcacttagattcagccagtgctgattttccatac
aatgcaggacaagccataagagatggagttaacagaaattcggcaattattggaggtgtc
attgccgtggtcatcttcaccatcctttgcaccttagtgttcctcatccgctacatgttc
cgccacaaaggcacctaccacaccaacgaagccaagggcgcagagtccgctgagagcgcc
gacgccgccatcatgaaccacgacccaaacttcacggagaccattgatgagagcaaaaaa
gagtggcttatctga
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