Sarcophilus harrisii (Tasmanian devil): 100927463
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Entry
100927463 CDS
T02286
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shr03400
]
100927463 (APEX2)
Enzymes [BR:
shr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
100927463 (APEX2)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
100927463 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
zf-GRF
Exo_endo_phos_2
CbeA_antitoxin
Motif
Other DBs
NCBI-GeneID:
100927463
NCBI-ProteinID:
XP_012408825
Ensembl:
ENSSHAG00000007846
LinkDB
All DBs
Position
X:complement(77613172..77632622)
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AA seq
483 aa
AA seq
DB search
MRLVSWNINGIRRSPEALRRLLDSLGADVTCLQETRVTRDLLEEPLAIVEGYSSYFSFSR
GRSGYSGVATFCKNNATPGAAEEGLTNLLTNHEGAVGAYGNTEEFTEDELRALDSEGRAV
LTQHQIRTSDGHEKTLTIINVYCPHADPDKPERLTYKLRFYRLLQLRAEALLRTGSHVII
LGDVNTSHQPLDHCDPPDLACFEENPGRQWLTQFLWRPDGENGLFVDSFRHFHPTKVGAF
TCWSTATGARLTNYGTRLDYILGDRALVLGEFEDSFLMPEVEGSDHCPVGATLRAELIPA
PRCPPLCTRYLPEFAGRQQKLSRFLVKVDPNLPGPTSAPPREEKNGVGVSKNRAKRTCGD
PGQGQLSLLRFFQAGRPPEKAPVTRAQEPETEPAGRDPGGAAPPAPEPGEGQAAFWKAVL
KGPPRPPLCKGHGEPCVLRTVRKAGPNFGRQFYVCSRPVGHSGNPVARCDFFLWVSGKTP
APH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggtgagctggaacataaatgggatccggcgatcgcccgaggccctgagacgc
ctgctcgattccctgggggccgatgtgacctgcctacaggagacccgagtcactcgggac
ctgctggaagagcccctggccatcgtggagggatacagctcctactttagcttcagtcga
ggtcgcagtggctactcaggtgtggccaccttctgtaaaaataacgccactccaggggca
gccgaggaaggcctgaccaacctcctaaccaatcacgagggtgccgtgggcgcgtatgga
aacacggaggagttcactgaagatgagctgcgggccctggacagcgaaggccgggcagtc
ctcactcagcaccagatacgcacttcagatgggcacgagaagaccttgacaataatcaac
gtctactgcccccatgcggaccccgacaagccggaacgactgacctacaagctgcgtttc
taccgactcctgcaactccgagctgaagccctcctgcggacgggcagccatgtgatcatc
ctgggcgacgtcaacacctctcatcagcctctggaccactgtgaccctccagatctggcg
tgctttgaagagaaccccgggcgccagtggctcacccagttcctgtggcggcctgacggg
gagaatgggctgttcgttgacagtttccgtcacttccacccgaccaaagtcggtgccttc
acctgctggtcgaccgctacgggggcacgcctcactaactatggtacccgactcgactat
atcctcggcgacagagccctggtgctgggggagtttgaggactccttcctcatgcctgag
gtggagggctcagaccactgccccgtgggggccaccctgagggccgagctcatcccggcc
ccccgctgtcccccactctgtacccggtacctgccggagtttgctgggcgacagcagaaa
ctctcccggttcctggtcaaagtggaccccaaccttccggggcccacttcagccccaccc
cgagaggaaaagaacggtgtcggggtgtctaagaaccgggccaagagaacctgtggggac
ccgggccagggccagctgagcctcctgaggttcttccaggcaggccgtcccccagaaaaa
gcccccgtcaccagagcccaggagccggagaccgagccggctggccgggaccccggggga
gcggcacccccagcccccgagccaggcgagggccaggcagcgttttggaaggcggttctg
aaaggcccccctcgtcctcctctgtgcaagggccacggggagccctgcgtgctgcgcaca
gtgaggaaagccgggcccaactttggccggcagttctacgtctgttctcggcccgtgggc
cacagtggcaatcccgttgcccgttgcgacttctttctgtgggtctctggcaagacccca
gcccctcactga
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