Sarcophilus harrisii (Tasmanian devil): 100927699
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Entry
100927699 CDS
T02286
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
100927699 (PRDM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100927699 (PRDM4)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100927699 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf_PR_Knuckle
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2HE
Mu-like_Com
zf-met
Motif
Other DBs
NCBI-GeneID:
100927699
NCBI-ProteinID:
XP_031793564
LinkDB
All DBs
Position
5:18607724..18633921
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AA seq
803 aa
AA seq
DB search
MHPRMNEMNLSPVGMEQLASSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGIPERNYPLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPNSISVDNNPALAIPNNPSALDPYQPGGSVGLEPSIVPMDSRVVGAHGAQGLHP
GDGHDVALDTAISMESVSRVTSPISTDGMAAEELTMEGVTGEHSQMPNGSRSHEPLSVDP
VGNNLAAEAVGHGGVIPLHGNGLELPVVMETDHMAGRVGGMPEGALADSIHTVAMSSNSV
SVALSTSHSLASLESVSLHEVGLSLEPVAVSSISQEVAMGSGHVDVASDNLSFVPPSLQM
EDSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDSPIESRARLSLPKQLVLRQS
LLVADVGVWTGETIPVRTCFGPLIGQQSHSMEVADWTDKAANHIWKIYHNGVLEFCIITT
DENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGVP
EHPDMHVCTCGKECNSYAEFKAHLSSHIQQHLPSQSHGGGGHGPTHSKERKWKCSMCPQA
FTSPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCALCDKSFTQK
AHLECHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLTHTQERQIKCPKCEKLFLRTNHLT
NHLNSHEGKRDYICEKCSKAYLTKYHLTRHLKICKGPASSSSAQEEEEEEESEEEEPGEA
AGAEGCRLGRAVYAAAEVLPGHK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccagaatgaatgagatgaacctgagtcccgtggggatggagcagctcgcttca
tcttctgtgagcaatgccttgccagtctcaggaagccacctcggcctggccgcctcacct
actcacaatgccatccctgccccaggactgcccgttgcaattcccaaccttggtccctcc
ttaagctctctgccttctgccttgtctctgatgctcccgatgggcattggtgatcggggg
gtgatgtgtgggataccggagaggaactaccctctccctcccccgccgtacccgcacctg
gagagcagctacttccggcacatcctacctggcatcttgtcttacttggccgacaggccc
cctcctcagtacatccacccgaactccatcagcgtggacaacaaccccgcgctggccatc
cccaacaacccctcggccttagacccctatcagcccggcggcagcgtcggcctggagccg
agtatcgtgcccatggattcgcgcgtggtcggtgcccacggggcgcagggtctccatcct
ggggacggccacgacgtggctctggacaccgccatcagcatggagagcgtctccagagtg
accagccccatctccacggacggcatggcggccgaggagctgaccatggagggggtgact
ggggagcactcccagatgccaaacggctccaggagccacgaacctttgtctgtggacccg
gtggggaacaacttggcggcggaggccgtggggcacgggggcgtgatccctctgcacggg
aatggcttggagctccccgtggtcatggagacggaccacatggccggccgtgtcgggggg
atgcccgagggcgccctcgccgactccatccacacggtggccatgagcagcaactctgtc
agcgtggccctctctacctcacacagcctcgcctccctggagtccgtttccctgcacgag
gtgggcctcagcctcgaacccgtggccgtgtcctccatcagccaggaggtggccatgggc
tcaggccacgtggacgtcgcctcggacaacctctcctttgtgccgccgtccctgcagatg
gaagactccaattccaacaaggagaacatggcgaccttgttcaccatctggtgcacactc
tgtgaccgagcctacccctcagattgccctgaccacggaccggtgacttttgttccagac
agcccaatcgagagccgagccaggctgtctctgccaaagcagctggtcctccgccagtct
ctcctggtggcagatgtgggtgtgtggactggagaaaccattcctgttcggacttgcttt
gggcccttgattggccagcagagtcactctatggaagtagcagattggacagacaaggca
gctaatcatatctggaagatataccacaacggtgtcctcgaattctgtatcattacaaca
gacgaaaacgaatgtaactggatgatgtttgtgcgcaaagccaggaaccgggaggagcag
aatctggtggcttatcctcacgacgggaagatctacttctgcacctcccaggatatccct
ccggagaacgagctgcttttttattacagccgggattatgcccagcagatcggggttccc
gagcacccagacatgcacgtctgtacctgtggcaaggagtgtaactcctacgccgagttc
aaggcccacctgagcagccacatccagcagcacctcccgagccagagccacggaggcggc
ggccacgggcccacccacagcaaggagaggaagtggaagtgctccatgtgcccgcaggcc
ttcacctcgccctccaagctccacgtgcacttcatgggccacatgggaatgaagccccac
aagtgtgacttctgcagcaaggctttcagcgaccccagcaacctgcgcacgcacctgaag
atacacacgggccagaagaactacaggtgtgccttgtgtgacaagtccttcacccagaag
gctcacctggagtgtcacatggtcatccacactggggagaagaacctgaagtgcgattac
tgtgacaagctcttcatgaggcggcaggacctcaagcagcacgtgctcactcacacgcag
gaaaggcagatcaagtgccccaagtgcgagaagctcttcttgaggaccaatcacttgacg
aatcatctcaactcccatgagggaaagcgggattacatctgtgaaaagtgttccaaggcc
tacctgaccaagtaccacctgacccgccacctgaagatctgcaaaggccccgcctccagc
tcctcagcgcaggaggaggaagaggaggaagagtcagaggaagaggagccaggagaggcc
gcaggggccgagggctgtcggctgggcagggccgtgtatgccgccgcggaggtcctccct
ggacacaagtga
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