Sarcophilus harrisii (Tasmanian devil): 100928066
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Entry
100928066 CDS
T02286
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04659
Th17 cell differentiation
shr04710
Circadian rhythm
shr05017
Spinocerebellar ataxia
shr05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100928066 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
100928066 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
100928066 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100928066 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100928066 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
shr03310
]
100928066 (RORA)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100928066 (RORA)
Nuclear receptors [BR:
shr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100928066 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100928066
NCBI-ProteinID:
XP_031805315
Ensembl:
ENSSHAG00000015734
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Position
2:525147623..526002595
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AA seq
551 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGSEAAAGSRETPLNQESARKSEPPAPVRRQSYSSTSRADQIE
TCGFPGLKNSSALNGKQTSPKSQGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEG
CKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQ
RDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNITTNGLTELHEDLSNYIDGHTPEGS
KADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAE
LEHLAQNISKSHMETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQ
YVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFK
SLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLA
LQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFT
SEFEPAMQIDG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctcccgcagcccccgacccagccgccagcgagccgggcagcagcggctcc
gaagcggccgccggctccagggagaccccgctgaatcaggaatccgcccggaaaagcgaa
ccgccggctccagtgcgcagacagagctattccagcaccagcagagctgaccaaattgaa
acgtgtgggtttccaggactaaagaacagtagtgcattaaacgggaaacaaacctctcca
aaatcacaaggtatttcggtaacaaagaagacacatacatctcaaattgaaattattcca
tgcaagatctgtggagacaaatcatcaggaatccattatggtgtcattacatgtgaaggc
tgcaagggctttttcaggaggagtcagcaaagtaatgccacatactcctgtcctcgtcag
aagaattgtttgattgatcgaactagtagaaaccgctgccaacactgtcgattacagaaa
tgccttgctgtagggatgtctcgagatgctgtaaaatttggccggatgtcaaaaaagcag
agggacagcttatacgccgaggtacagaaacaccggatgcagcagcagcagcgagatcac
cagcagcagcctggcgaggcagagcccctgacacctacctataatatcaccaccaacggg
ctaacggagctccatgaggacctcagtaattacattgacggtcatacccctgaaggtagc
aaagcagactctgcagttagcagcttctacttagacatacagccttctccagatcagtcg
ggtcttgatattaatggaatcaaaccagaaccaatatgtgactacacaccagcatcgggt
ttcttcccttattgctctttcacaaatggagagacttctccgactgtatccatggcagaa
ttagaacaccttgcacagaatatttccaagtcacatatggaaacttgccaatacttgaga
gaggagctccagcagataacatggcagacttttcttcaagaagagattgaaaattatcag
aacaagcagagggaagtaatgtggcagttgtgcgcggtcaaaataacagaagctattcag
tatgtagtggagtttgccaaacgcattgatggatttatggaactgtgtcaaaacgatcaa
attgtgcttttaaaagcaggttctttggaagtggtgtttatcagaatgtgccgtgccttt
gattctcagaacaacaccgtatattttgatgggaaatatgctagccctgaagtattcaaa
tccttaggttgtgaagactttattagctttgtttttgaatttggaaaaagtttatgttct
atgcacctgactgaagatgagattgcattgttttctgcatttgtgttaatgtctgcagat
cgctcgtggctgcaggagaaggtaaaaatagaaaaattacagcagaaaattcaactagca
cttcagcatgtcctacagaagaatcatcgggaagatggaatattaaccaagttaatatgc
aaggtgtctacattaagagcactatgtggacgacatacagaaaagcttatggcatttaaa
gcaatatacccagacattgtgcgacttcattttcctccgttatacaaggagttgttcact
tcagaatttgagccagcaatgcaaattgatgggtaa
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