Sarcophilus harrisii (Tasmanian devil): 100928099
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Entry
100928099 CDS
T02286
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100928099 (RNF40)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100928099 (RNF40)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
100928099 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
BRE1
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100928099
NCBI-ProteinID:
XP_003761636
Ensembl:
ENSSHAG00000009792
UniProt:
G3W7I1
LinkDB
All DBs
Position
1:complement(253071505..253082748)
Genome browser
AA seq
1014 aa
AA seq
DB search
MSGAGNKRAAGDGGSGPSEKKQNREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEVLLRRHEGRGELLS
RTEGQGTQDSIELDGVPLPEPGTTERRDLPTLQLRPSLSEPALAFVAALGASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLHRRVEELCHRVQSRGECESLGEGLRTLTRELGQDNRRL
QDLTTQLQEKHHRISLEYSELQDKVTSAETKVLEMETSVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSGSFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRSNERLKVALRSLPEEVVRETGEYRLLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQTIGSGPSAPSQTASEDQGS
GVGGTLAPVKEEESSGSGPAVLQEAKKESLSAPVTPTASTASVVKKEEPSFEEEVPLTQA
QTPHPAPQTPASRSRETEPRGKRESRDREGSASGTPTSSSSSSSSRGDRDKAKAEESKRK
ESELLKGLRGELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRGRI
RDLEEKERKESKKLADEDALRRIRLAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFED
MQEQNGRLIQQLREKDDANFKLMSERIKSNQIHKLLREEKDELGEQVLGLKSQVDAQLLV
VQKLEEKERVLQGSLGSVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQSRLREI
QPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQKKVEVYADADEILQEEIKEYKARLT
CPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggccggcaacaagcgcgcagccggggatgggggctcgggcccctcggagaag
aagcagaatcgggaggagaagaccacgaccacccttattgagcccatccgcctgggaggc
atctcctccacggaggagatggacctgaaggttttgcaatttaagaacaaaaagttggca
gagcgactggaacaacgacaggcctgtgaagatgaattaagagagcgcattgaaaagcta
gaaaagcggcaggccactgatgatgccacattgctgattgtcaatcgctattgggcccag
ctggatgaaactgtagaagtcctcctccgacgacatgaaggacgaggagaattgctctct
aggacagagggacagggaacccaagatagcatcgaacttgatggggtccctctgcctgaa
ccaggaaccacagagagaagagatctgcccaccctgcagcttcggccttcgctgagcgag
ccagctttggcttttgtggcagccctgggagccagcagtagtgaagaggtagaacttcag
ctccagggtcgcatggagttctccaaggctgcggtgtccagagtggtagaggcctcagat
cgcctgcatcggcgagtagaagaactgtgtcatcgagttcaaagcagaggagaatgtgag
tccctcggagaaggacttaggactttaaccagggagctcggccaggacaataggcgtcta
caggacttgactacacagctgcaggagaagcaccaccgaatctctctggaatattcagaa
ctccaagataaggtgacatcagcagagaccaaggtgttagagatggagacttcagtagag
gatctgcagtgggacattgagaaattgcgcaaacgggagcaaaaactcaacaagcaccta
gctgaggctctggagcagctcaattccggctactatgtgtcagggagctcggggagtttc
cagggaggccaaatcacactcagtatgcagaagtttgagatgctgaatgctgaactggaa
gagaaccaagaattggccaatagccgcatggctgagttagaaaagcttcaagcagagctg
cagggcgctgtacgcagcaacgaacggctcaaggtggcccttcggagcttgcctgaagag
gtggtcagagagactggggagtaccgactgctccaggcccagttctctctgctctacaac
gaatccttgcaagtgaagacccagctggatgaggcccgggggctcctccttgctaccaag
aactcccatctgaggcacattgagcacatggagagtgatgaactgagtctgcaaaagaag
cttcgaactgaagtgattcaactagaagacacattagcccaggtgcgaaaagaatatgag
atgcttcggatcgaatttgagcagaatctagcagccaacgagcaggcagggcccattaac
cgggagatgcgtcacctcatcagcagcctgcaaaaccacaaccaccagctgaagggtgat
gcacagcggtataaaaggaagctgagagaggtgcaggcggagattggcaagctccgggca
cagactattggctcaggcccttcagccccatcccaaactgcctctgaggatcaggggtca
ggagtagggggaacactggccccagtgaaagaagaggagagttctgggtcggggccagct
gttctccaggaggccaaaaaagagtcattgtctgccccagtgactcccacagcatctaca
gctagtgtggtgaagaaagaagagccctcttttgaagaggaggtacctcttacccaggcc
caaactccacatcccgcaccccaaacccctgcttccaggagccgggagaccgagcctcga
ggaaaacgagagtcccgggaccgggaagggtcagcatctgggaccccaacatcctcttcc
tcctcctcttcctcaagaggagatcgagacaaggccaaggctgaggagagtaagaggaag
gagtctgaattactcaagggacttcgaggggagctcaagaaggcccaagaaagtcagaag
gagatgaagctgttgctggacatgtacaagtccgcccccaaggagcagagggacaaggtg
cagctcatggctgcagagcgcaaggccaaagctgaggtagatgagcttcggggccggatc
cgggacttggaagagaaggaaaggaaagagagtaagaaattggcagatgaggatgctctg
cgaagaatccggttggcagaggaacagattgagcacctgcagcgcaaactcggggccacc
aagcaggaggaggaggcgctgctctcagagatggatgtgactgggcaggcttttgaggat
atgcaggagcagaatggtcgccttatacagcagctgcgtgaaaaggatgacgccaacttc
aagctaatgtctgagagaatcaagtccaaccagattcataagctgctccgggaagagaag
gatgagctgggggagcaggtcctgggcctcaagtctcaggtggatgctcagcttttggtg
gtacagaagctagaagagaaggagcgagttcttcagggcagcttggggagtgtggagaag
gagctaaccctacggagccaggccctggagcttaacaagaggaaggcagtagaagcagca
cagctggctgaggacctcaaggtccagctggaacatgtacagagccggcttcgggaaatc
cagccctgcctggccgagagccgagcggcccgagagaaggagagcttcaacctcaagagg
gcccaggaggacatctctcgactccggcggaagttggagaagcagaagaaggtagaggtc
tatgctgatgctgatgagattctgcaggaggaaatcaaggaatacaaggcccggctgacc
tgcccctgctgcaacacccggaagaaggatgctgtcctaaccaagtgctttcatgtcttc
tgctttgagtgcgtgcggggccgctacgaggcccgccagagaaaatgccccaagtgtaat
gcggcttttggggcgcatgacttccaccgtgtctacattagctga
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integrated database retrieval system
