KEGG   Sarcophilus harrisii (Tasmanian devil): 100928206
Entry
100928206         CDS       T02286                                 
Symbol
CPSF4L
Name
(RefSeq) LOW QUALITY PROTEIN: putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03015  mRNA surveillance pathway
shr05164  Influenza A
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100928206 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100928206 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shr03021]
    100928206 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:shr03019]
    100928206 (CPSF4L)
Transcription machinery [BR:shr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100928206 (CPSF4L)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100928206 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 zf-CCCH_3 Torus zf-CCCH_12 zf-CCCH_DUS3L zf-CCCH_RBM22 zf-CCCH_4
Other DBs
NCBI-GeneID: 100928206
NCBI-ProteinID: XP_023358341
LinkDB
Position
4:complement(317968121..317984079)
AA seq 225 aa
MQELIAGLEKISFDLEDDVENQRGIGFLPFPGMDKSGVAVCTFFLKGLCEKGKLCPFRHD
DGEKTVVCKHWLRGLCKKSDCCKFLHQYDVTKMPECYFYSKFGECSNKECLFLHTDSASK
IRDCPWYDQGFCKYGPLCKFHHVRRVLCVNYLVGFCPEGPGCRFTHLKMTXLLHKASHSK
NVNQLQRPIKLASFVKMLSEHSWQESPPAEVSSKSNVSFVAVHLL
NT seq 678 nt   +upstreamnt  +downstreamnt
atgcaggaactcattgctgggttggagaaaatctcctttgatcttgaggatgatgtggag
aaccaaagaggtattgggttcctgcccttcccaggaatggacaaatcgggggtggctgta
tgtaccttctttctcaaaggcctctgtgagaaaggcaagctctgtcccttccggcatgat
gatggggaaaagacagtagtatgtaaacactggctgcgagggctttgtaagaagagcgac
tgctgcaaatttctgcaccaatatgacgtcaccaagatgcccgagtgttatttctactcc
aaatttggagaatgcagcaataaagaatgccttttccttcatactgactctgcctccaag
atccgtgattgtccctggtatgatcaaggtttctgcaagtatggccctttgtgtaaattc
caccatgtgagaagagtgctgtgtgtcaactacttagttggcttctgtccagagggacct
ggttgcagatttacacacctcaagatgactnngttactacataaggcaagtcactcaaag
aatgtaaatcaactacaaaggccaataaaacttgcttcctttgtgaaaatgctttctgaa
cacagttggcaagagagcccaccagctgaagtgtcaagcaagtccaatgtgtcctttgta
gcagttcatttgctttag

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