Sarcophilus harrisii (Tasmanian devil): 100928250
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Entry
100928250 CDS
T02286
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr01522
Endocrine resistance
shr04330
Notch signaling pathway
shr04658
Th1 and Th2 cell differentiation
shr04919
Thyroid hormone signaling pathway
shr05020
Prion disease
shr05165
Human papillomavirus infection
shr05200
Pathways in cancer
shr05206
MicroRNAs in cancer
shr05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100928250 (NOTCH1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
100928250 (NOTCH1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100928250 (NOTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100928250 (NOTCH1)
05206 MicroRNAs in cancer
100928250 (NOTCH1)
09162 Cancer: specific types
05224 Breast cancer
100928250 (NOTCH1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100928250 (NOTCH1)
09164 Neurodegenerative disease
05020 Prion disease
100928250 (NOTCH1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
100928250 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
Gurken_M
JAG1-like_EGF2
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
100928250
NCBI-ProteinID:
XP_031810801
Ensembl:
ENSSHAG00000004931
UniProt:
G3VR37
LinkDB
All DBs
Position
2:489184039..489253204
Genome browser
AA seq
2537 aa
AA seq
DB search
MRPLLVPVVCLSLLPVLARGFRCSQPSETCLNGGKCEIHDNGTETCICSVPYVGEHCQAP
NPCLNNPCKNAGTCHMVIQGSIVDYACTCRLGFSDRLCLTPEDNACLNNPCRNGGTCELI
TLTDFKCRCPPGWSGKTCQQADPCASNPCANGGKCLPFESSYICVCPLGFHGPTCKHDVN
ECSQNTAICKNGGTCHNEVGSYQCVCRPAFTGQNCELPYVPCNPSPCQNGGTCRQTGDTT
YECTCLPGFTGQNCEDNIDDCPGNTCKNGGTCVDGVNTYNCRCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNTHGDYNCVCVNGWTGEDCSENIDDCANAACFHGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGICIDKISEFHCDCPTGFNGHLCQYDIDECASTPCKNG
AKCVDGPNTYTCECTEGFTGSHCEVDINECDPDPCHYGTCKDGIAAFTCLCQPGYTGHRC
ETNINECQSQPCRNGGTCQDRHNAYNCVCLKGTTGPNCEINLDDCASSPCDSGKCIDKIN
GYECACEPGYTGSMCNINIDECAGNPCHNGGTCEDGINGFTCHCPDGYHDLTCLSEVNEC
SSNPCIHGKCRDGLNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEEVLAPCAKDPCKN
GGECKESEDYESFSCICPTGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCSCRAGYT
GRNCETDVDDCQPNPCHNGGACSDGINTAFCDCLPGFRGPQCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPPGFTGSYCQH
DINECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGTCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCQNSGLCMDTGNTHYCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCNPFIDPITRGPKCFNNGKCVDQVGGYSCNCPPGFV
GERCEGDVNECLSNPCDPHGTQNCVQRVNDFKCECRQGYTGRRCDSVIDGCKGKPCKNGG
TCAVATNTGRGFICNCPSGFEGATCENDSRTCGSLHCRNGGTCVSGQKSSKCLCLGPFTG
PECQYPVSSPCLSNPCYNQGTCEFIPESPFYQCHCPANFNGLLCHILDFSFPGGVGRDIT
PPEFEEKCEIPECKKDTGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFN
DGSCDSQCNNAGCLFDGFDCQKVEVQCNPLYDQYCKDHFSDGHCDQGCNNAECEWDGLDC
ADNMPEKLADGTLVVVVLMLPENLKNNSFHFLRELSRVLHTNVVFKKNAKGEYMIFPYYG
NAEELKKHHIKRSAESWTDMPGVVLDKMKTSLYSRVGGRQRRELDQMDIRGSIVYLEIDN
RQCIQSSSQCFQSATDVAAFLGALASMGNLNIPYKIEAVQSETVESPENSQLYPMYVVVA
ALVLLAFIGFGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNASD
GALMDDNQNEWGDEDLETKKFRFEEQVMLPDMDDQTDHRQWTQQHLDAADLRIPSMAPTP
PQGEIDADCIDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN
QTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR
NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD
AAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ
ERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKPST
KGLSCNGKDAKDIKARRKKSQDGKGCLLDSSSVLSPVDSLESPHGYLSDVASPPLMTSPF
QQSPSMPLNHLPGMPDAHLSINHLNMAGKPDMAALGSASRLGFEAVPPRLSHLPVASSPS
SVMSNSGSMSFAVGGAAGLNGQCEWLSRLQNGMVPNQYNPLRGNMPAGPLNPPAQGLQHN
ILGPLHNGLSSTTLSQMMTYQGLPNTRLATQPHMMQAQQLQQMQPQQSLQQPQQPQQPQQ
QQQQHNTSSAATGHIGQSFLGGELNQQDVQQLGSSSMAVHTILPQETQILPSSLSQPMTT
TQFLTPPSQHSYSSPMDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNISDWSEGISS
PPTSMQSQIAHIPDAFK
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgctcctagtgcccgtcgtctgtctgtcgctgctgccggtcctcgcacgaggt
tttcggtgttcacaaccttcagaaacctgtctgaatggaggcaagtgtgaaatccatgac
aatggaacagaaacctgcatttgcagtgtaccctatgttggtgagcattgtcaagccccc
aacccttgcctcaataacccgtgcaagaatgctgggacctgccacatggtcatccagggc
agcatcgtggactatgcctgcacctgccgcctgggtttctctgatcggctctgtctgact
ccggaggataatgcttgcttgaataacccttgccggaatggaggcacctgtgaactcatc
acactcactgacttcaagtgccgatgtcctccaggatggtcagggaagacttgccaacag
gccgacccttgcgcctccaatccctgtgccaacggcggaaagtgcctgccctttgagtcc
agctacatctgtgtctgcccacttggtttccacggccctacttgcaagcatgacgtcaat
gagtgcagccagaacacagccatctgcaagaatgggggcacctgccacaatgaggtgggc
tcctaccagtgtgtctgccggccggccttcacaggccagaactgcgagctgccctacgtg
ccatgcaacccttccccctgccagaacgggggcacctgccgccaaaccggagacaccacc
tatgaatgtacttgtctgccaggttttactggccaaaactgtgaagacaacattgatgac
tgccctggcaatacttgtaagaatggaggtacctgtgtggatggggtgaacacctacaac
tgccgctgccccccagaatggacaggtcagtattgcacagaggacgtggatgaatgtcag
ctcatgcccaatgcctgccagaatggcggtacttgccataatacccatggtgactacaac
tgtgtttgtgtcaatggctggactggggaggactgcagtgaaaatatagatgattgtgca
aatgctgcctgtttccatggggccacctgccatgaccgtgttgcttccttctactgtgaa
tgtccccatggccgcacaggtctgctttgccacctcaatgacgcctgcatcagcaacccc
tgtaacgagggctccaactgtgacaccaacccggtcaacggcaaagccatctgcacttgc
ccctctggctacatggggccagcctgcaaccaagatgtggatgagtgctcgctgggtgcc
aatccttgtgaacatgctggtaaatgcatcaacaccctcggctccttcgagtgtcagtgc
ctgcaaggatatacgggaccccgatgtgagatcgatgtcaatgagtgcatatccaatccc
tgtcagaacgatgctacttgcttggaccagatcggggagtttcagtgcatctgcatgcca
ggctacgagggggtttattgtgagatcaacacagatgagtgtgccagcagcccctgcctg
cacaacggcatctgtatcgacaagatcagcgagttccattgcgactgccccacgggattt
aatgggcacctctgtcagtatgacattgatgaatgtgccagcacaccttgtaagaatgga
gcaaagtgtgtggatggccccaatacctatacctgcgagtgtactgaaggtttcacaggc
tcccactgtgaggtagacatcaacgaatgcgatcccgacccctgccactatggaacctgt
aaggatggcatcgcggccttcacctgcctctgccagcccggctacaccgggcatcgctgc
gaaaccaacatcaacgagtgccagagccagccctgccggaacgggggcacctgtcaggat
cgccacaatgcctacaactgtgtctgcctcaaggggaccacagggcccaactgcgagatc
aaccttgatgactgtgccagcagcccctgtgactctggcaagtgtatagacaagatcaat
ggttacgagtgcgcatgtgagccaggctacacagggagtatgtgcaacatcaacattgat
gaatgtgctggaaacccatgtcataacggtggcacgtgtgaggatggcatcaatggcttc
acctgccactgcccggatggctaccatgacctcacatgcctttcggaagtcaacgaatgc
agtagtaacccatgtatacatgggaaatgccgggatggccttaatgggtacaagtgtgat
tgtgacccaggctggagtggtaccaactgtgatatcaacaacaatgagtgcgagtcgaac
ccatgtgttaatggaggtacctgcaaggacatgaccagtggctatgtgtgcacttgccgt
gagggcttcagtggtcccaactgtcagaccaacatcaatgaatgtgcttccaacccatgt
ctgaatcagggcacctgtattgatgatgtggccggctacaagtgtaattgcctcctcccc
tatactggtgccacctgtgaggaagtgctggctccatgtgccaaagatccatgcaaaaat
ggtggggagtgtaaggagtcagaagattatgagagcttctcatgtatatgccccacaggc
tggcaaggacagacctgtgagattgatatcaatgaatgtgtgaagagcccatgtcggaat
ggcgctacctgtcagaataccaatggtagttaccgctgcagctgcagggctggctatact
gggcgcaactgtgagaccgacgtggatgactgccagccaaatccttgccacaatggtgga
gcctgctctgatgggatcaatactgccttctgtgactgccttcctggcttccgaggtccg
cagtgtgaggaggacatcaatgaatgcgccagcaatccatgtaagaacggagccaattgt
actgactgtgtcaacagttacacctgtacctgtccatctggcttcagtggaatccattgt
gagaacaacactccagactgtactgagagctcctgcttcaacgggggcacctgtgtggat
ggcatcaacactttcacctgcctttgcccaccaggcttcacaggcagctactgtcaacat
gacataaatgagtgtgattcacgcccttgcttacatgggggtacctgccaagacagctat
ggcacctacaagtgtacctgtcctcagggatacacaggacttaattgccagaacctggtg
cgctggtgtgactcatcaccctgtaaaaatggtgggacctgctggcagaccaacaatctg
taccgctgtgagtgcaacagtggctggactggcctttactgtgatgtacctagtgtgtcc
tgcgaggtggctgccaagcagcaaggtattgatgtggcccacctatgccagaactctggg
ctctgcatggacactggtaacacccactactgccgctgccaggcaggctatactggcagc
tactgtgaggagcaggttgatgagtgctctcccaatccctgccagaatggagctacctgt
acagactatcttggaggttattcatgcgagtgtgttgctggctaccatggggtgaactgc
tctgaagagatcaatgagtgtttgtcccatccttgccagaatggtggtacctgcatcgat
ctgatcaatacatacaagtgctcatgtcccaggggaactcaaggtgtgcactgtgagatc
aatgtggatgactgcaaccccttcattgaccccattactcggggaccaaaatgtttcaat
aatggcaaatgtgttgaccaagtcggaggctacagctgcaactgccctcctggctttgtt
ggagagcgctgtgaaggggatgtcaatgaatgtctctctaacccgtgtgacccgcatggc
actcagaactgtgtacagcgtgtcaacgactttaagtgcgaatgtcggcagggatacaca
gggcgccgctgtgattcagtcattgatggatgtaagggcaagccctgcaaaaatggtggg
acctgtgctgtggcaaccaacaccggacgtggcttcatatgcaactgcccttctggcttt
gaaggtgccacgtgtgagaatgattcccggacgtgtggtagcctgcattgtaggaatgga
ggcacttgtgtctctggccagaagagctccaagtgcttatgtctgggccccttcacgggt
cctgagtgccagtacccagtgagcagcccgtgcctctccaacccctgctacaaccaggga
acgtgtgagttcatccctgagagccccttctaccagtgtcactgccctgccaacttcaat
gggcttttgtgccacatcctggacttcagtttcccgggtggggtggggagagacatcacc
ccacctgagtttgaagagaaatgtgagatccccgagtgcaagaaggacactggaaataag
atctgcgacggcaagtgtaataaccatgcttgtggatgggatggcggagattgttccctt
aacttcaatgacccctggaagaactgcacacagtccctgcagtgctggaagtacttcaat
gacggcagctgtgatagccagtgcaacaatgccggctgcctgttcgatggctttgattgc
cagaaagtggaggtccagtgcaaccctctgtatgaccagtactgtaaggaccacttcagc
gatggccactgtgaccagggctgcaacaatgcagagtgtgagtgggatggtttggactgt
gccgacaacatgcctgagaagctggcagacgggaccctggtggtggtggtgctgatgctc
ccagaaaatctgaagaacaattctttccatttccttcgggagctcagtcgagtcttgcac
accaacgtagtcttcaagaagaatgccaagggggagtacatgatcttcccctactatggc
aatgcagaggaactgaagaagcatcacatcaagagatctgcagagagctggactgacatg
cctggcgttgtcctcgataaaatgaagacttctctttactcccgagtgggagggaggcag
cggagagagctggaccagatggatatccgaggatcaattgtatatctggaaattgacaat
cgccaatgtatccagtcatcttcccagtgttttcagagtgcgacagatgtggcggctttc
ctgggggccttggcttcaatggggaaccttaacatcccctataaaatagaagctgtacag
agtgagacagtggaatccccagagaactcgcagttgtatcctatgtatgtggtggtggct
gctttggtgctgctggccttcattggcttcggtgtgctggtgtcaagaaaacggcgcagg
gaacatggccagctctggttccctgagggcttcaaagtgaccgagtccagcaagaagaaa
cggcgggagcctttaggcgaagattcagtgggactgaaacccctgaagaatgcctcagac
ggtgccttaatggatgacaatcagaatgaatggggagatgaagacctggagaccaagaaa
ttcaggtttgaagaacaagtcatgctgccagacatggatgatcagacagatcaccggcag
tggactcagcagcatctcgatgctgctgacctccgtatcccctcgatggctcccacccca
ccacagggcgagattgatgctgactgcatagatgtcaacgtcagaggtcctgatggtttc
acccccctgatgatcgcttcatgtagtggagggggcttagagacaggcaacagtgaagag
gaggaggatgctcccgctgtcatctcagacttcatttatcaaggagctagcttgcacaac
caaacagatcgcaccggggagacagcccttcatctggctgctcgctattcccgttcagac
gcagccaagcgtctgttggaggccagcgcggacgccaacattcaggacaacatggggcgc
acccctcttcacgcggctgtgtctgctgatgctcagggagtcttccagatcctgatccgg
aatagagctacagatctggatgctcgaatgcatgatgggaccaccccactgatcttggct
gctcgtttagcagtggaaggcatgctggaggatctgatcaactcccatgcagatgtcaat
gcagttgatgatctgggcaagtctgccctgcactgggctgctgcagtaaataatgtggat
gctgctgttgtcctgctgaaaaatggagcaaataaggatatgcagaacaacaaggaagaa
acgcctctgttcctcgcagccagagaagggagttatgagactgccaaagttctgctggac
cactttgcaaaccgggacataaccgaccatatggatcggctgcctcgagatattgctcag
gagcggatgcaccatgacattgtgcggcttctggatgaatacaatctggtgcgcagccca
ccactgcacaatgggcccctgggggcacccaccttgtcccctccactctgctcccctaac
agttacattggtaacctgaagccagctgttcagggcaagaaggcccggaaacccagcact
aaaggactcagctgtaatggcaaggatgccaaagacatcaaggcccgcaggaaaaaatct
caggatgggaagggctgtcttctggacagttccagcgtgctctcccccgttgactccctc
gagtctccccatggctacctgtcggacgtggcatctccgccgctcatgacttcccccttc
cagcagtccccgtccatgcccctgaaccacctccctggcatgcctgatgcccacctgagc
atcaaccacctgaacatggccgggaagccggacatggccgccctgggcagcgccagccgc
ttgggctttgaggcggtccctccccgcctgtcccacctgcctgtggcctccagccccagc
tcagtgatgagcaatagcgggtccatgagctttgcagttggtggggccgccggcctgaac
gggcaatgtgagtggctctcacgactccagaacgggatggtcccaaaccagtataatcca
ttgagggggaacatgccggctggccccctgaatccacctgcccagggcctccagcacaac
atcttggggccgctccacaatggcctttcctccactaccctgtctcagatgatgacctac
cagggcctgcctaacacacggctggccacccagccccatatgatgcaggcccaacagtta
cagcagatgcagcctcagcaaagcttgcagcagccacagcagccacagcagccgcagcag
cagcagcagcagcacaacacaagttccgcagcaactggccacattggccagagtttcctt
ggtggtgagttgaaccaacaggatgtacaacagctagggagcagtagcatggctgtccac
accattctgccgcaagagacccagatcctgccatcttctctctctcagcccatgaccact
actcagttcttaacaccgccatcgcagcacagttattcttcccccatggacaacacaccc
agtcaccagctgcaagttcctgaccatcccttcttgaccccctctcccgagtctccggac
cagtggtctagctcctctcctcattccaacatctctgactggtcggaaggcatatcgagt
ccacctacaagtatgcagtcacagatagcacacattccagatgcttttaagtga
DBGET
integrated database retrieval system
