KEGG   Sarcophilus harrisii (Tasmanian devil): 100928256
Entry
100928256         CDS       T02286                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr01524  Platinum drug resistance
shr03430  Mismatch repair
shr05200  Pathways in cancer
shr05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100928256 (MSH2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100928256 (MSH2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    100928256 (MSH2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    100928256 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shr03400]
    100928256 (MSH2)
DNA repair and recombination proteins [BR:shr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     100928256 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27 YidB
Other DBs
NCBI-GeneID: 100928256
NCBI-ProteinID: XP_031806304
UniProt: G3VBH0
LinkDB
Position
2:88010940..88078318
AA seq 934 aa
MAVQPKEALVMDSQAECSFVRFFQSMPAKPLTTVRIFDRGDYYTAHGDDALLAAREVFKT
QAVIKYIGVSGSKKLESVVLSKMNFESFAKDLLLVRQYRVEVYKNKAGSKATKENDWHVA
FKASPGNLSQFEEVLFGSSDMSCSVGGVGVKLSIVDGQRLVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIERGGILITERKKTDFSAKDIIQD
LNRLLKSKKGDQVNSAVLPEMENQIAVSSLSAVIKYLELLSDDTNFGQFELTTFDLSQYM
KLDNAAVSALNLFQGSAEDKSGTQSLAALLNKCKTPQGQRLLNQWIKQPLLDKNRIEERL
NLVEAFVVDAELRQTLQEELLRRFPDLNRFAKKFQRHAASLQDCYRIYQAINQLPNVIQA
LEKHEGKHQSLLLAVFVTPLTDLHSDFSKFQEMIETTLDMNQVENHEFLVKASFDPHLTE
LRESITNLEKKMQASLTNAARELGLEPGKHIKLDSNAQLGYYFRVTCKEEKVLRSNKNFN
TLDVQKNGVKFTNSKLAAFNDEYLKIREEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDATVSFAHVSNGAPVPYVRPVILEKGQGKIILKGSRHACVEVQDEVAFIPNDIYFEKN
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDCQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALADQLPTVNNLHVSALTTDETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IENAKQKALELEEFQHFGKPQESDDTEPAAKRCYQEKEQGEKIIQAFLNKVKELPFAEMS
EEGIRTKLKRLKAEVIAQNNSFVNEIISRLKVTP
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaggaagcgctggtcatggacagccaggctgagtgtagcttcgtc
cgcttcttccagtctatgccggcgaagccgctcaccaccgtgcgcatcttcgacaggggc
gattactacaccgcgcacggcgatgacgcgctgttggccgcccgggaagtgttcaagacc
caggcggtcatcaagtatatcggggtgtctggttcaaaaaaactggaaagtgttgttctt
agtaaaatgaattttgaatcttttgcaaaagacctcctcttggttcgtcagtatagagtt
gaagtttataagaataaagctgggagtaaggccaccaaggagaatgattggcatgtggca
ttcaaggcttcaccaggcaatctttcccagtttgaagaagttctctttggcagcagcgat
atgtcatgttccgttggtggtgtaggtgttaagctgtctattgttgatggccagagatta
gttggggttgggtatgttgactccatacagaggaaactaggactgtgtgagtttccagac
aatgatcaattctccaatctagaagctctgctgattcagattggcccaaaggaatgtgtg
ctacctggaggtgaaactgctggggacatgggaaaactgagacaggttattgagagagga
ggaattctgatcacagagagaaagaaaactgacttttcagcaaaagatatcattcaggac
ctcaatcgtttgttgaaaagcaaaaagggagatcaagtcaatagtgctgtattgcctgag
atggagaatcagattgcagtttcatcattgtcagctgttattaagtatttagaactttta
tcagatgatacaaactttggacaatttgaactgactacttttgatctcagtcaatatatg
aagttggataatgcagctgtcagcgctcttaacctttttcagggctctgctgaagacaaa
agtggtactcagtctcttgctgccttgttgaataaatgcaaaacacctcaaggccaaaga
ctgcttaatcaatggattaagcagccactactcgataagaaccggatagaggaaaggtta
aatctagtggaagcctttgtagtagatgcggagctgagacagactttacaagaagaatta
cttcgacgtttcccagatcttaatcgatttgccaaaaagtttcagagacatgcagccagc
ctacaagattgttaccgaatctatcaagccataaaccagcttcctaatgttatacaagca
ttggaaaaacatgaaggaaaacaccaatcgttgttgttggcagtcttcgtaacacctttg
actgatcttcattctgatttctccaagtttcaggaaatgatagaaacaaccttagatatg
aaccaggtggaaaaccatgaatttcttgtgaaggcatcctttgatcctcacctgacagag
ttaagagagtcaattactaatctagaaaagaagatgcaggcatctttaacaaatgcagca
agagagctaggcttagaacctggtaaacacattaaattggactccaatgcacaactagga
tattatttccgagtaacctgcaaggaagagaaagtccttcgtagcaataaaaactttaac
acattagatgtccagaagaatggtgtcaagtttaccaacagcaaattggctgccttcaat
gatgagtacctcaaaattagagaagaatatgaggaagcccaggatgccattgttaaagaa
attgtcaacatttcttctggctatgtagaaccaatgcagacattgaatgatgtattagct
caactagatgcaactgtcagttttgctcacgtatcaaatggtgcacctgttccatatgta
cgtccagtcattttggaaaagggacaagggaaaatcattttgaagggttccagacatgcc
tgtgttgaagttcaggatgaagttgcatttatccccaatgacatatactttgagaaaaat
aagcagatgttccacattattactggcccaaatatgggaggtaaatcaacatacattcgt
caaactggagtaatagttctgatggctcagattggctgttttgtaccatgtgagtcagca
gaagtgtctattgtggattgtatcttggcccgagttggagcaggtgattgtcagctgaaa
ggtgtatctacattcatggcagaaatgctagagacagcttctattctcaggtctgcaacc
aaagactccctgataatcatcgatgagttgggaagagggacttctacctatgatggattt
gggttagcatgggctatttcggagtatattgccactaagataggtgccttctgtatgttt
gctactcattttcatgaactgacagcattggctgaccagttgccaacagtgaataatcta
catgtttcagcattaactactgatgagacattaactatgttatatcaagtaaagaaaggt
gtctgtgatcagagttttgggattcatgttgcagagcttgctaattttcctaaacatgta
atagagaatgccaaacaaaaggcccttgaactagaagaattccagcattttggaaaacct
caagaatctgatgacacagaaccagcagccaagagatgctaccaagaaaaagagcaaggt
gaaaaaataattcaggcatttctgaacaaggtaaaggaattgccctttgcagaaatgtca
gaggaaggtatcagaaccaaactgaaacgactgaaggctgaagtgatagcccaaaataac
agttttgtgaatgaaataatttcacggttaaaagttactccgtga

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