Sarcophilus harrisii (Tasmanian devil): 100928393
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Entry
100928393 CDS
T02286
Symbol
CACNB2
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2 isoform X1
KO
K04863
voltage-dependent calcium channel beta-2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04010
MAPK signaling pathway
shr04260
Cardiac muscle contraction
shr04261
Adrenergic signaling in cardiomyocytes
shr04921
Oxytocin signaling pathway
shr05410
Hypertrophic cardiomyopathy
shr05412
Arrhythmogenic right ventricular cardiomyopathy
shr05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100928393 (CACNB2)
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
100928393 (CACNB2)
09153 Circulatory system
04260 Cardiac muscle contraction
100928393 (CACNB2)
04261 Adrenergic signaling in cardiomyocytes
100928393 (CACNB2)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100928393 (CACNB2)
05412 Arrhythmogenic right ventricular cardiomyopathy
100928393 (CACNB2)
05414 Dilated cardiomyopathy
100928393 (CACNB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100928393 (CACNB2)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100928393 (CACNB2)
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Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
100928393
NCBI-ProteinID:
XP_031795758
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Position
5:complement(235861392..236234871)
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AA seq
662 aa
AA seq
DB search
MVQSDMSKSPPIPAVAAAAVAQEIQMDLLDNPVPAAPLGAAPQAYGKGARRKNRFKGSDG
STSSDTTSNSFVRQGSADSYTSRPSDSDVSLEEDREAVRREAERQAQAQLEKAKTKPVAF
AVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPV
KLENMRLQHEQRAKQGKFYSSKSGGNSSSSLGDIVPSSRKSTPPSSAIDIDATGLDAEEN
DIPANHRSPKPSANSVTSPHSKEKRMPFFKKTEHIPPYDVVPSMRPVVLVGPSLKGYEVT
DMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAIIERSNTRSSLAEVQSE
IERIFELARTLQLVVLDADTINHPAQLSKTSLAPIIVYVKISSPKVLQRLIKSRGKSQAK
HLNVQMVAADKLAQCPPELFDVILDENQLEDACEHLADYMEAYWKATHPPSSNPPNPLLS
RTLATASLPISSTPASNSQGSQDQRNDYSAPTRSASQAEEEPCLEPVRKSQHRSSSSAPH
HNHRSGLGRGLSRQETFDSETQESRDSAYVEPKEDYSHEHGDHYVPHREHNHREDVHGIS
DHRHRESRHRSREADREQDHNECHKQRSRHKSKDRYCDKDGEVISKKRNEAGEWNRDIYI
RQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaagtgacatgtccaagtcgcctcccatcccggcggtggcggcagcggcggtg
gcgcaggagatccagatggacctgctggataatcccgtgcccgcggcgccgctgggagct
gccccacaggcttatgggaaaggagccagaagaaaaaatagatttaaaggatctgatgga
agcacctcatctgatactacctcaaatagttttgtccgtcagggttcggcagactcctac
actagccgtccatctgattcagatgtctctctggaggaagacagggaagcagttcggaga
gaggcagagagacaggcccaggcccagctggaaaaagccaagacaaaacctgttgcgttt
gcagtgcggaccaatgtcagctatagcgcagcccacgaggatgatgtcccggtaccaggc
atggccatctcgttcgaagcaaaagattttctgcatgttaaggaaaaatttaacaatgac
tggtggataggacggttggtaaaagaaggctgtgaaataggattcatcccaagtccggtc
aaactagaaaacatgaggctacagcacgagcagagggcaaagcaagggaaattctactcc
agtaaatcaggaggaaattcatcatccagtctgggtgacatagtacctagttccagaaaa
tctacgcctccatcatctgctatagacatagatgctactggcttagatgcagaagaaaat
gatattccagccaaccaccgctcccctaagcccagtgcaaacagtgtaacatcaccccac
tccaaagagaaacgaatgcccttttttaagaagacagagcacattcctccttacgatgtg
gtgccttctatgcgaccagtagtgttagtggggccttccctgaaaggctatgaggtgaca
gatatgatgcagaaagcactatttgattttttaaaacacagatttgaagggcggatatct
atcacaagggtcacagctgacatctcgcttgccaaacgctcagtattaaacaatcctagc
aagcacgcgataatagaacgctccaacacaaggtcgagtttagctgaagttcagagtgag
attgaaaggatatttgaactggcaaggactttgcagttggtagtcctggatgcagacacc
atcaatcatccagcccagctcagcaaaacctctctggctccaattatagtctatgtaaag
atttcttctcctaaggttttgcaaaggctaataaaatctcgaggaaaatctcaagcaaag
cacctcaatgtccagatggtggcagctgataaactggcccagtgtccaccagaattgttt
gatgtaatcctagatgaaaaccagcttgaagatgcctgtgaacatcttgctgactacatg
gaggcttactggaaggccacccaccctcctagcagcaatccccccaaccctctccttagt
cgaactctagctacggcatctcttccaatcagctccacccctgcctccaattcacagggt
tcccaagaccagaggaatgactattctgctcccactcgctctgcttcccaagctgaagag
gaaccctgtcttgagcccgtccggaaatcccagcaccgttcctcctcctcagccccacac
cacaaccatcgcagcggcctgggccgaggcctctccaggcaagagacatttgactcagaa
acccaagaaagtcgagactcggcctacgtggagccaaaggaagattactcccacgagcac
ggagaccactacgtcccccaccgggagcacaaccaccgggaagacgtgcacgggatcagc
gaccacagacacagggaatctcggcaccggtctcgggaagctgaccgagagcaggaccac
aatgaatgccacaagcagcgcagccgacacaaatcaaaagatcgatactgtgacaaggat
ggagaagtgatatccaaaaaacggaatgaggctggggagtggaacagggatatttacatc
cggcagtaa
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