Sarcophilus harrisii (Tasmanian devil): 100928500
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Entry
100928500 CDS
T02286
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X5
KO
K27396
protein Smaug
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100928500 (SAMD4A)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100928500 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
100928500
NCBI-ProteinID:
XP_023358949
Ensembl:
ENSSHAG00000011639
LinkDB
All DBs
Position
2:complement(340384624..340717095)
Genome browser
AA seq
707 aa
AA seq
DB search
MMFRDQVGVLAGWFKSWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELHILEG
EANNPGIINQWQQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGSFSSQNRGRSDSVDYGQTYYYHQR
QNSDDKLNGWQNSRDSGICISASNWQDKNLGCENGHLPLYSSSSVPTTINTIGTSSSSTI
LSGQAHYSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVAS
SGSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQ
LEAQNVTKGARHKIVISIQKLKERQNLLKSLERDILEGGNLRVPLQELHQMILTPIKAYC
SQSSNTEKHSQESEPHHQLTLIGSDNQVLDCKDSAAGGGIQQHHMSGCEGESAGAPLPEG
DLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQK
LFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNLPSARL
GLLGTSGFISSTQRSSATNPTILKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHSS
PQTMLMFQQQEFQVPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagatcaagtcggagtgctggcaggttggtttaaaagctggaatgaatgt
gaacagactgttgctttgctgtcccttttaaagcgggtgagcaggacacaggctcgattt
cttcagctctgcctggagcattccctggcggactgcactgagcttcacattcttgaagga
gaagccaataacccgggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tcccttttattaactcacctgcctttgttgaagccaggaaacattgaagcaaaagtggag
tacatgaaactgttgcctaaaatcctggctcactccattgaacacaaccagcacatagaa
gaaagcaggcaactcctgtcatatgctttgatccacccagccacttcactggaagaccgg
agtgctttagccatgtggttgaatcatttagaggaccgtacatcagggagcttcagcagt
cagaacagaggtcggtctgattctgtggattatgggcagacatactactatcaccaaaga
caaaactctgatgacaagctcaatggatggcagaactctcgggattctgggatatgcatc
agtgcctccaactggcaggacaaaaacctaggctgtgagaatggccacctacccctctac
tcttcatcttcagtccccaccacaatcaatactattggtactagcagcagcagcacaatt
ctctcaggccaggcacattacagccctttgaaacgatctgtatcccttaccccacccatg
aatgtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctaga
ggaccccagtgcatcccatccgatcatgcccccctgtctccacaaagcagtgtagcctct
tcaggaagtggtgggagtgaacacttagaagatcagactactgctcgtaacacattccaa
gaagaaggtagtggtatgaaagatgttcctgcctggttaaaaagtctccgcctacacaaa
tatgctgcacttttctcccagatgacctatgaggaaatgatggctctcacggaatgtcaa
ctagaggctcagaatgttaccaaaggcgcaagacataaaattgtcatcagcatccagaag
ctcaaggagagacagaatctactaaagtctttagaaagggacatcttagaagggggcaac
ctgcgtgtccctctgcaagaattgcaccagatgatccttactccaataaaagcatattgc
tctcagagctctaacacagagaaacacagccaagagtcagagcctcatcatcaacttact
ctgattggttctgataatcaagtccttgattgtaaggactctgcagcaggaggtggaatc
cagcagcaccacatgagtggctgtgagggagaatctgcaggggcacctctgcctgaaggc
gatctccctggacagttcacaagagtcatgggaaaagtgtgtacacagctcctggtctct
agacctgatgaggaaaatataagttcctatttacaactcatagacaagtgtctaattcat
gaggcatttacagaaacacagaaaaaaagattgttgtcatggaaacagcaggtgcagaag
ctctttcggtctttccctcggaaaacccttctagacatatcaggatatcgacagcaaaga
aatcgaggttttggacaatcaaactctctaccaacagcaggctctgtaggtggtggcatg
ggtaggcggaaccctcgccagtaccagatcccttcaaggaatctcccttcagcccgactt
ggcctcttgggtaccagcgggttcatcagctctacccagcgtagttcagcaaccaaccct
accatcctaaaacaaggaagacagaatctttggtttgccaaccctgggggcagcaacagc
atgccaagtagaactcacagctctgtccaaaggacccgttccctgcctgttcactcatcc
cctcagaccatgttgatgttccaacagcaagagttccaggttccagtgacagaacctgac
atcaacaacaggctagaatccttgtgcctcagtatgactgaacatgcccttggggatggg
gttgatcgaacctccactatctag
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