Sarcophilus harrisii (Tasmanian devil): 100928701
Help
Entry
100928701 CDS
T02286
Name
(RefSeq) ATP-binding cassette sub-family A member 3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100928701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100928701
Transporters [BR:
shr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100928701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
RsgA_GTPase
AAA_22
AAA_15
SMC_N
AAA_29
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
100928701
NCBI-ProteinID:
XP_031797982
LinkDB
All DBs
Position
1:complement(271321583..271573449)
Genome browser
AA seq
1692 aa
AA seq
DB search
MYVFFHELTLFFFFFQKWQRYVVIAEFFLMVLFALLLLFFRYIVSKNAAKFYNYTLIPID
KLPTFFENVFEQNKWELIYVPSNSETVKTIVEDAYEALGIDMKVSGFTSEDIFEEYMKFS
SNSTAVLAAIVFNHDFTDGKDTLPLQVSYSLRFSNNARNIWYFWKNMVVHDELAVWHTDL
LFPVFPEAGPRNSDSDDGGEPGYFAEGFLTIQHAINKAIMRYHAKNTARDLFNITSVFIR
RFPFPVSSADNFYPIFIFFLPLTIILVFSVIVFNMIRFVMLEKESMLKEYLCIMGMSNLM
LWSSYFFTYFLFFLFIIIVLTLILLAKIVYLPIIIYSEGSLVFFFLMCSAIVSIFFSFMI
STFFNKTTTAVALGGFLYFLTYLPYSFIHSYYKVMSLNKKLLSCLFSNVAILLGIQILIS
SEITENGISWTKLTQPVTRNENLTFGHILGMLIFDSFLYAVVTWYIQAVFPGNLGIPQPW
NFFLMKSYWYGTSAATVDKNTETYITFENPYIEEEPVGLEVGIQIQNLSKVFITNNIKKY
AVNDLTLNFYKGQITVLLGHNGAGKTTILSMLTGMLPPTSGEAYICGYEISKSIVQVRES
MSFCPQYDILFHYMTVAEHLYLYGQLKGLTRKECRKEIKQTLKFFDLEEKHDDYPKSLTA
GMKRKLSLCITLLGGSKVIILDEPTSRMDPITQNNTWELLQQYKQGHTIVLTTHNMEEAD
VLGDRIAIMAKGELQCCGSSFFLKHKYGAGYHMIIVKEFKCDTEKIFQVVQQYVPEANLE
NNFGTELSFSLPKESTYRFVALFNEIETRQKELGITTFGVSVTTMEEVFFRVDKMAASGV
DLQNIQFSSLWMQQEEITKKSLLSKKKAIWRRQRSSTFMDINAENPFPFMYNTGWKLYCQ
QFYAMFNKKALHCWRNWKMTLIHILAPLLFSFLLLKSFNSLISQQNPPLKLDLSLYGKTI
VPFSVSGNMSLINNISESLYIILKNMGQQPQLVTGEMEGFLLESKTCVEHCIIAISLEVT
NSTLMATALFNNQAYHSAGIAVSVLDNILFRMLSGPDTSIIVSNKPQPVSMFTTEKDVIL
ETSNGHEIAFSLSFGLAALASRFSLQAVKERVKKMKHMQFVTGVCIIIFWVSALIWDLFI
FFIPCLLFLVVFKACQIETLYNNFMDALMIFMLYGWCTIPLMYLMGFFYYRASTAYTKLF
MFNFFSGWASFLFVYLVEIKALYLAQYAEIVSDIFIVLPSYNLVMAVSGFYEFVRNKQLC
DLLTTETDDCLLYGSYFYKISNKGIGKFLIAMAVLGFIFLLMLFLIEIYSWELKSCFNRL
LLKIYHMWNWNLKINSDPVTFPEDEDVVKEREKVLECPKNMISSLNSLLVIRKLTKVYFK
QVPFIAVDKLTLTVQKGECLGLLGFSGAGKTTTFKMLTGDETITSGDAFFENHSLCWNIR
EVRKIIGYCPQYNALLDYMTGREIAMMFARLRGIPEPYIQQYVEHILQALLIERHSDKLI
STYSGGTKQKMNNAIAFLGFPPIIFLDEPSTGMDPVARHLLWDLITCIRESGKAIVLSSH
SIEECEVLCTKLAIMAKGKLQCFGSPQYLKNKFSKGYTLVATIKKDSKDTDLEHFKESVK
VIFPGSKLVQEHQRMVRYLIPSEILSWSKVFGILEEIKDDYNLEDYTISQTTLEQVFMSF
ANTKEEEEETIE
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttcttccatgaactaacactttttttttttttctttcagaagtggcaacgg
tatgttgtaattgcagaattcttcttgatggtgctgtttgctttgcttcttttgtttttt
cgctatattgtctcgaaaaatgctgctaaattttataattacactcttattcccatcgat
aaacttccaactttttttgaaaatgtttttgagcaaaataaatgggagctcatatatgtg
ccttcaaacagtgagacagtgaagactattgttgaagatgcatacgaagctttaggcatt
gacatgaaagttagtggctttacttcagaggacatttttgaagaatatatgaagttcagt
agtaactctactgctgtactggctgccatagtttttaaccatgacttcactgatggcaaa
gatactctacctcttcaggttagctactctctacgtttcagtaacaatgcaagaaatatc
tggtacttttggaagaatatggtggttcatgatgagttagcagtttggcacacagatctt
ctctttccagtttttcctgaggcaggacctagaaattctgattctgatgatggaggagaa
cctggatattttgctgaagggttcctgacgatacagcatgctattaataaagctataatg
cgataccatgcaaaaaatactgcaagagatttgtttaatatcacctctgtttttataagg
aggtttcctttcccagtttcttctgctgataatttctatcctattttcatcttttttctt
cctttaacaattatattagttttctccgtgatcgtattcaatatgatccgttttgtcatg
ttggaaaaggaaagtatgctgaaggaatacctctgcataatgggaatgagcaatctgatg
ctctggagttcctatttcttcacatatttcttgttttttctttttatcatcattgtgctg
actctgatactgctagccaagattgtatacctgccaataatcatctacagtgaaggatct
ttggtgtttttctttctgatgtgctctgccattgtttccatattcttcagcttcatgatc
agcacattcttcaacaaaaccactacagctgttgctttaggaggtttcctctacttcctt
acctacctcccatattctttcattcattcttactacaaagtgatgagtctcaataagaag
ctactttcctgtcttttttcgaatgttgcaatactcttgggtattcagattctaatttcc
tcagaaattacagaaaatgggattagttggacaaaacttacacagccagtcaccagaaat
gaaaatttaacctttggacatatccttggaatgctaatatttgattcttttctctatgcc
gtggtgacttggtatatacaagcagtttttccaggaaatttaggaataccccagccctgg
aacttcttcttgatgaaatcctactggtatgggacttcagcagctactgtagataaaaac
acagaaacttacatcacttttgaaaatccatacattgaagaggaacctgtaggtttggag
gttgggattcaaatacaaaatctctctaaggtgttcattacaaacaatattaagaaatat
gcagtaaatgatctgacactgaatttttataagggacaaatcactgtccttctaggacat
aatggagcagggaaaactaccatcctttcaatgctcacaggtatgttgcctccaacaagt
ggagaggcatatatctgtgggtatgagatctccaagtccattgttcaggtccgggagagc
atgagtttttgtccccagtatgatatcttatttcattacatgacagtagctgaacacctt
tatttgtatggtcagttgaaaggactgactcggaaggaatgccgtaaagaaattaaacag
actttgaaatttttcgacctggaagaaaagcatgatgactatccaaaatccctgacagca
ggcatgaagcgaaaactcagcttatgcattacactcttaggaggctccaaggtaatcatt
ctggatgagccaacgtctaggatggatcccatcactcaaaacaatacctgggaacttctt
cagcaatataaacagggccacaccattgtgctgactacacacaatatggaggaagcagat
gtgctgggtgaccgcattgctatcatggccaagggggaactgcagtgctgtggctcttca
ttcttcctcaaacacaaatatggtgctggataccacatgatcatagtaaaggagtttaaa
tgtgacacagagaagatcttccaagttgttcagcaatatgtaccagaagccaatttggag
aacaactttggaactgaattatcttttagcctacctaaagaaagtacatacaggtttgta
gctttgtttaatgaaatagaaaccagacaaaaagaactaggcattaccacctttggagtt
tctgtcacaactatggaagaagtcttctttagggttgataaaatggcggcttccggtgtg
gatcttcaaaacatccaattttcttctctgtggatgcagcaagaggaaataaccaaaaag
tcattgctttccaaaaagaaagccatttggagaaggcaacgatctagtacttttatggac
attaatgctgagaatccctttccttttatgtataacactgggtggaagctctactgccag
cagttctatgccatgttcaacaaaaaagctttacactgttggcgcaattggaagatgaca
ttgatacacattttggcacctctgctattcagtttcttattgctaaaaagctttaattct
ttaattagtcaacaaaacccacccttgaaattggatttgagtttatatggcaaaacaatt
gtccctttttctgtctctggaaatatgtctctgattaataatatctcagaatccttgtat
attatactaaagaatatgggacaacagccccaactggtgacaggtgaaatggaaggtttc
ctgcttgaaagtaaaacttgtgttgagcactgcattattgcaatttctctggaagtcact
aactccactctgatggcaacggctctgttcaacaaccaggcgtaccactctgctggaata
gcagtttcagttttggataacattctgtttaggatgctttctggccccgacacttcgatc
atagtctccaataagcctcagcccgtcagcatgttcactactgagaaagatgtcattctt
gaaacttctaatggacatgaaattgcctttagtctgtcctttggcctggcagccttggcc
agtaggttttctctccaggctgtgaaagagagagtaaagaaaatgaagcacatgcagttt
gtgaccggtgtgtgcatcatcattttctgggtgtctgccctgatatgggatctcttcatc
ttcttcattccttgtttactgtttctggtggtgttcaaagcctgtcaaatagaaactctc
tacaataactttatggatgccctgatgatcttcatgttatatggatggtgcaccattccc
ctcatgtacctcatgggctttttctattatcgagcttctacagcctataccaagcttttc
atgtttaacttcttttcaggatgggccagtttcctatttgtctaccttgtagaaattaaa
gcgttatatttagctcaatatgctgaaattgtgagtgatatcttcatagtacttcctagt
tacaacttggtgatggctgtgagtggattttatgaatttgtcaggaacaagcagctttgt
gatttgcttaccacagaaacagatgattgtcttctttatggttcttacttctacaaaata
agcaataaagggatcgggaaatttttgattgccatggctgttttaggtttcattttcctc
cttatgctttttttaattgagatatactcctgggaactaaaaagctgttttaatcgttta
cttctcaagatctaccacatgtggaattggaatttgaagattaactctgatccagtaaca
tttcctgaagatgaagatgtggtaaaggagagagagaaagtcctggagtgccctaaaaat
atgatatcatctttgaacagcctgctagttattaggaaactcacaaaggtatatttcaaa
caagttccttttatagctgtggacaaactcactctaacagtccagaagggagaatgctta
gggcttctgggtttcagtggtgcagggaaaaccactaccttcaaaatgttgactggagat
gagactatcacctctggggatgccttttttgaaaatcacagcctctgctggaacattaga
gaggtgagaaagataattggctactgtccacagtataatgctctcctggactatatgacg
gggagggaaatagcaatgatgtttgctcggctccgaggaatccctgagccttatatccaa
cagtatgtggagcatattcttcaggcactgctaatagagaggcattcagacaagctcata
agcacctatagtggtggcactaagcagaaaatgaataatgctattgcctttcttggattt
ccaccaatcatctttctggatgaaccaagcactggcatggatcctgtggcccgacattta
ctctgggacttgataacatgcatccgtgaatctgggaaggccattgtcctaagctctcat
agcatagaggaatgtgaagtgctatgcactaaactagccatcatggcgaaagggaagctc
cagtgtttcggcagtcctcagtacctcaagaacaagttcagcaagggttataccctagtg
gccacgatcaagaaggatagtaaagatactgacctggaacatttcaaggaatccgtcaag
gtgatcttcccaggcagcaaattggtacaagagcaccaaagaatggtccggtacctcatt
cctagtgagattctcagctggtcaaaggtgtttggtatactggaggaaatcaaagacgac
tacaatttggaggattataccatcagtcagactacattggagcaagtcttcatgagcttt
gctaatacaaaagaagaagaagaagaaacaatagaatga
DBGET
integrated database retrieval system
