Sarcophilus harrisii (Tasmanian devil): 100928806
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Entry
100928806 CDS
T02286
Symbol
ABCA12
Name
(RefSeq) ATP-binding cassette sub-family A member 12 isoform X1
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr02010
ABC transporters
shr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100928806 (ABCA12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100928806 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100928806 (ABCA12)
Transporters [BR:
shr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100928806 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
AAA_30
AAA_23
RsgA_GTPase
AAA_22
SRP54
DUF4162
Motif
Other DBs
NCBI-GeneID:
100928806
NCBI-ProteinID:
XP_031813955
Ensembl:
ENSSHAG00000011632
LinkDB
All DBs
Position
3:67315657..67559008
Genome browser
AA seq
2601 aa
AA seq
DB search
MASHFHQLRILVWKNWLGVKRQPLWSLVLILWPVIIFIILAITRTKFPPIAKPTCYLAPR
NLPSTGFFPFLQTLLCDTDTKCKDTPYGPQDLLRRKGIDSTFFKESEIQRKSSNLRKDSN
SSPRSVKFPERRNTSLVFSSSRPDLENTVTDSISTFNSSQVLAQILKLEKMLKENSTSEN
LRREICENHPSYTVDDTFSWNTLGKNIFSQFCLSNITLLESSIQELRNQLSQISTNPNNQ
MIVFQESARVLSFFSQLQDQTALWRFLSSVPSLFQNDTKLNELLDILHNANSALLVVQKV
SPRVTNNEGFKTIQKSVKHLLYTLDSSDQGGPSNATSHWNEEGEEKLSPSSLAAQLLILE
NFEDALLNISAESPYVPYLMCVRNVTDNLVNESPENLKLLQSTIRFKKSFHRNGSYEDYL
PPVSEIIRSKLLQLRNVTKLLCESEIFDSIEETCQFPNISFGKLCEGSHFHMQFLEAAEL
GTEIAAGLLNHDNIISQKLKDLLTGDPNKINLNMDRFLEQVLQMNYLENITQLIPVVEPL
LHVNNSATASEKPGQLIDMFKNIDQLKVDLQRTTGMPNTSIDTLLAMPIPENRTEIISHI
FWLYPCDSNVTDLKLEVEMMEFCNLSIPERSRLSYLTGITLLHYLDIYNFTYKVFFPRED
QEPVDKVIELIIKLKVFLNQMVNGTQPLFDKMRSLKQIHLSRSVPLSQAIYRNHHVNGPE
GSFSTISQALCSQGITTDYLTAMLPSSQKPKGGNHTKDPLTYNLSKKQIALKYGIPLTAT
PFCFSLYKDIVNMPAGPVIWAFLKPLLLGKIMYAPYTPTTKAIMEKSNVTLRQLAELREK
SQEWMDKSPLFMNSFHLLNQTIPMLQNTLRNPFVQVFIKFSVGLDAVELLKQINELDILR
LKLQNNIGLIDQLNTLSSLTVNISSCVLYDRIQPAKTIAEMEMEAQKLYKNNELFGSVIF
KLPSNRTRQRKDNLDGSSLPPLIEYTIRMSLKTAQTTSSLRNKLWAPGPHNSPSQNQIYG
RAFIYLQDSIERAIIELQTGRNSQEIAVQVQAIPYPCFMKDNFLTSVSYSLPIVLMVAWV
VFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLLESIGFLLVTIIILIIILKFGNI
LPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLITVES
ELSFIVKTFMSLLSPTAFSYASQYIAQYEEQGIGLQWENMYSSPVHDDTTSFGWLCCLIL
IDSVIYFLIAWYVRNVFPGTYGVASPWYFPVLPSYWKEHFGCAEVKHEKSDSFLFTNIMM
QTTNISGSKTSPEYMFPPNLEPEPKDLTVGVALHGLTKMYGSKVAVDNLNLNFYEGHITS
LLGPNGAGKTTTISMLTGLFSATTGTIFIYGKDTRTDLDLIRKNMGVCMQHDVLFSYLTT
KEHLLLYGSIKVPHWNKKQLHEEVKRTLKDTGLYNHRHKRVGTLSGGMKRKLSISIALIG
GSRVVILDEPSTGVDPCSRRSIWEVITKNKTARTIILSTHHLDEAEVLSDRIAFLEHGGL
RCCGSPFFLKEAFGDGYHLILTKKKSPNLHSSKICNTLAVTSMIQSHLPEAYLKEDIGGE
LVYVLPPFNTKVSGAYLSLLRALDSGMSDLNIGCYGISDTTVEEVFLKLTKDTQKDGEMS
TEQFATKKTGVTKVNGMMTPDDLSMSSSSITTERDDKVLTRAERLDGVGLLLKKIVAILI
KRFHHTRRNWKGLIAQIILPVVFVTTAMGLGTLRNVGTVYPEIQLSPSLYGTYDQTAFFG
NSHPSTEPLVSAMLTFPGIDTICLNTSDTRCLKKGTLGQWNTSGEPITNFGVCSCSENIQ
ECPNFNYSPPHRTTYSSQVLYNLSGHHMENYLISTANEFTQKRYGGWSFGLPLTKDLQFD
ITTIPENRTLSKVWYDPEGYHSLPAYLNSFNNFLLRINMSDYDAARHGIVMYSHPYPGVQ
DQEQATISSLIDILVALSILMGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWITN
FIYDMVFYLVPVAMSIGVIAAFKLPAFSSENNLGAVSLLLLLFGYATFSWMYLLAGLFHE
TGMAFITYVCINLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGY
GLIELSQQQSVLDFLKAYGVEYPNETFEMNKLGAMFVALVVQGTVFFFLRLLINEWLIKK
IRILLRDMNSSSMLENIEEDEDVRAERIRVETGGAEFDLVQLQRLTKTYQLIHKKIIAVN
NISIGIPAGECFGLLGVNGAGKTTIFKMLTGDIIATSGKILIRNQTGTLGRVDTHYSSIG
YCPQEDALDDLVTVEEHLYFYARIHGIPEKDIKETVYKLLWRLQLMPYKEKSTCMCSYGT
KRKLSTAIALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEA
LCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHFKNSKANMEVLTQFMQLHFPKTYLK
DQHLSMLEYHVPVTAGGVANIFDLLETNKAALNITNFLVSQTTLEEVFIDFAKDQKAHVN
LETSSQGSSISGDSQDEQPES
NT seq
7806 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacacttccatcaactacggattctggtgtggaaaaattggctaggtgtcaaa
agacagccgctttggtcacttgtcctgattttatggcctgtcattattttcataattttg
gctattacccggacgaaattccctccaatagcaaaaccaacctgttaccttgcacctcga
aaccttcctagtactggctttttcccatttctgcaaacactactctgtgatacagatacc
aaatgcaaggatactccctatggaccacaagatttactgcgcagaaaaggaattgatagc
accttttttaaagaaagtgaaatccagagaaagtcatccaacctgaggaaggacagtaat
tcatcacctcggagtgttaaatttccagaaagaaggaatacatcactggtcttttccagc
tcaagacctgatttagaaaacaccgtaacagattccatctccacattcaacagcagtcag
gtgcttgcacagattctaaagttggaaaagatgctaaaggaaaattcaacttcagaaaac
cttagaagagaaatctgtgagaatcatccatcctatacagtggatgacactttttcgtgg
aacactctagggaaaaatattttcagccagttttgcctttccaacataactctcttagaa
tcatctatccaagaactaagaaaccagctctctcagatctcaactaaccccaacaatcaa
atgatagttttccaagaatcagccagagtgctgtcattcttttcacaactacaggatcaa
actgcattgtggcggtttctctcaagtgttcccagtttgttccaaaatgacacaaaatta
aacgagttattagatatcctccataacgcaaacagtgctctgttggtagtgcagaaggtt
tctccacgtgtcacgaataacgaaggattcaagaccatccagaagtctgttaagcatctg
ctctacactctggactcttcagaccaaggtggaccaagcaatgcaacatctcattggaat
gaggaaggtgaagaaaaattatctccaagcagtctggctgcccagctccttatcctggaa
aactttgaagatgccctcttaaacatttctgctgagagtccttatgtaccctacttgatg
tgtgtgagaaatgtaactgacaatttagtcaatgaatcaccagaaaatctaaaacttcta
caatctaccattcggttcaaaaaatcttttcatcgaaatggctcttatgaggactacttg
cctccagtttcagaaatcataagatcaaaactgctacaactccgaaacgtgaccaaactt
ctttgtgaatctgagatcttcgattcgatagaagaaacctgccagtttcctaatattagc
tttggaaagctatgtgaagggagtcacttccacatgcaattccttgaagcagctgagctc
ggcacagaaattgcagcaggtttactgaaccatgacaatatcatatctcagaagctaaag
gatttgcttactggggatccaaacaaaattaatttaaacatggatcggttcctagaacag
gtgttgcaaatgaattacttggaaaatatcacacagttaataccagtcgtagaacccttg
ctgcatgtcaataacagcgcaactgcttctgaaaaaccaggtcaattaatagatatgttt
aaaaatattgaccagctgaaagtagatctccagagaacaacaggaatgcccaatacaagt
attgatacactcttggcaatgcccatccctgaaaacagaactgagatcatttctcatata
ttctggctgtatccttgtgattctaatgtcactgatctgaaattggaagtcgaaatgatg
gaattctgcaacctatccattccagagagatcccgtctatcctatcttacaggaattaca
cttctgcattacttggacatttataactttacctacaaggtatttttccctagagaagat
caagagccagtagataaagtgatagaactcattataaaactgaaagtctttctcaatcaa
atggttaatggcacccaaccactgttcgacaaaatgaggtcactaaaacaaatacacctg
tctcgaagtgtgccattatcccaggcaatatatagaaaccatcatgttaacggccctgaa
ggatcatttagcaccatctctcaagccttgtgctctcaaggaatcactactgactactta
acagccatgttgccctcttcacagaagcccaaagggggcaaccacactaaagaccctttg
acctacaacttgagcaaaaaacaaatagctttaaaatatggaattcccttgactgcaaca
ccattttgcttttccctttataaagatatcgttaatatgcctgctggacctgtaatttgg
gccttcctgaaaccattgttattgggaaagattatgtatgcaccttataccccaaccaca
aaagcgattatggaaaagtctaatgtaacactgagacaactggcagaattgagagaaaaa
tctcaagagtggatggataagtcaccactattcatgaattcattccatctgttaaaccaa
accatcccaatgcttcagaatactctgaggaatccttttgtgcaagtttttataaaattc
tctgtgggattggatgccgttgaactcctgaaacagataaatgagcttgatattctaagg
ctaaaattacagaacaacatcggtctcattgatcagcttaatacactgtcttccttgaca
gttaacatttcctcctgtgtattatatgatcgcattcagccagcaaaaacaatagctgaa
atggagatggaagctcaaaagctatacaagaacaatgaactctttggaagtgttattttc
aagcttccttctaacagaaccaggcagagaaaagataatcttgatggcagctcccttcct
cctctaatagaatacaccatccgaatgagtctcaagacagcacaaacaaccagcagcctt
cggaacaagctctgggctcctggtccacataattctccatcacaaaaccagatctatggc
agagcattcatctacttacaggatagcattgaaagagctataattgaattgcagactggg
aggaattcacaggaaatagcagttcaagttcaagcaatcccctatccctgtttcatgaaa
gacaacttcttaaccagtgtttcttattcacttcctatcgtgcttatggtagcctgggtt
gtatttatagctgcctttgtgaaaaaacttgtttatgagaaagacctgcggctccacgag
tacatgaagatgatgggtgtgaattcctgcagccatttttttgcctggctcttggagagc
attggattcctgcttgttactatcattattcttattataatactcaagtttgggaatatc
ctccccaaaacaaatggattcatcttattcctatatttttcggactatagcttctctgtt
attgccatgagctacctcatcagtgtcttcttcaacaacactaatattgctgccctgatt
ggaagtctcatctacatcattgcctttttccccttcattgttctaattacagttgaaagt
gaattgagctttatagtcaagacattcatgagtctactgtccccgactgcattcagttac
gccagtcagtacattgcccaatatgaggaacagggcattggtcttcaatgggaaaatatg
tacagttctcccgtccatgatgataccacctcatttggctggttatgttgcctaattctt
attgattctgtcatttactttcttattgcgtggtatgttaggaatgttttcccagggact
tatggtgtggcttctccctggtattttccagttcttccttcctattggaaggagcacttt
ggatgtgcagaagtaaagcatgaaaaaagtgatagcttcctcttcaccaatattatgatg
cagaccaccaatatatctggcagtaagacaagtcctgagtatatgtttcctcctaatctg
gagcctgaaccaaaagatctcacagttggagttgctctccatggtctcaccaaaatgtat
ggctccaaagttgcagtggataatctcaatctgaatttttatgaagggcatatcacctca
ttgctggggcctaatggagctgggaaaaccactaccatttccatgttgactgggttattt
agtgctacaacaggcacaatatttatctatggaaaggacactagaactgatctggatctt
attcgaaagaacatgggtgtctgcatgcagcatgatgtcttattcagttatctaacaaca
aaggaacaccttcttctctatggatccatcaaggttcctcactggaacaaaaaacaacta
catgaggaagtaaaaaggactttaaaagatactggtctgtataatcatcggcataaaaga
gttgggacattatcaggaggaatgaagagaaaattgtccatttccattgcccttattggt
ggatcaagggttgtaattttagatgaaccttccactggagttgacccatgttcacgtcga
agtatatgggaagtcatcacaaagaataaaacagcaagaacaataattctctctacacat
catttggatgaagctgaagtgctcagtgacagaattgccttcttggagcatggaggcctt
aggtgctgtgggtccccctttttcctcaaggaagccttcggtgatggctaccatctcatt
ctcactaagaaaaagagcccaaatctacattcaagtaaaatatgtaacacattggcagta
acctccatgatccaatcacacctacctgaagcttatctcaaggaggatattggtggagaa
cttgtctatgtgctacccccattcaataccaaagtttctggagcctatctctctctccta
agagctcttgacagcggcatgagtgatcttaacattggctgctatgggatttctgatact
actgtggaagaggtgtttttgaaactgactaaagacacacagaaagatggagagatgagt
acagaacaatttgcaacaaagaaaactggagttactaaagtcaatggcatgatgacccct
gatgatctttctatgagcagcagcagcatcaccactgaaagagatgacaaagtcttgaca
agagcagagagactagatggggtgggacttttgctgaagaagatcgtggccattctcatt
aagcggttccaccatactcgtcgaaactggaaaggtctcatcgctcagattatcctccca
gttgtctttgtaacgacagcgatgggtcttggtacgctgagaaatgttggcacggtttat
cctgagatacagctttctccatccctttacggcacctatgaccagacagctttctttggg
aactctcacccaagcacagaaccattagtctctgcaatgcttactttccctggaatagat
accatatgtttgaacaccagtgatacgagatgtttaaagaaaggtactttaggtcaatgg
aatacaagcggagaacccatcactaactttggtgtctgttcctgttcagaaaatatccag
gaatgtcccaactttaactactccccacctcaccgaacaacgtattcttctcaagtcctt
tataacctcagtgggcatcacatggaaaattaccttatttcaacagctaatgaattcacc
caaaaaaggtatggaggatggagttttggattgcctctgactaaggatcttcaatttgat
ataacaaccattcctgaaaacagaacactttccaaggtgtggtacgatcctgaaggttat
cactcccttcctgcttacctcaacagcttcaacaacttccttcttcgaattaatatgtca
gactatgatgctgccagacatggtattgtcatgtatagccacccatacccaggtgtacaa
gaccaagaacaagctacgattagcagtttaattgatattttagtggctctctccatcctg
atgggctactccgtcaccacagcaagctttgtgacctatgttgtaagggaacatcagacc
aaagctaaacaactccagcacatctcaggcataggcgtgacatgttactggatcacaaac
ttcatttatgacatggttttctatctagtacctgttgcaatgtcaattggagttattgca
gctttcaagttacctgctttttccagtgaaaataatttaggggcagtatctctcctcctt
ctgctctttgggtatgcaacattttcttggatgtacttgttagcgggacttttccatgag
actggaatggccttcatcacttacgtttgcatcaacttgttctttggcatcaattcaatt
gtttcactgtcagtggtatattttctttccaaggaaaagcctaatgatccgactttggaa
ctcatctctgaaacccttaaacggattttcctgattttcccacaattctgttttggctat
ggtttgattgaactatctcaacaacaatctgttttagactttctaaaagcctatggagtg
gaatatcccaatgaaacttttgagatgaataaattaggcgcaatgttcgttgccttggtt
gttcaaggcactgtattctttttcttacgactcctaatcaatgaatggctgattaaaaaa
atcagaatcttactcagagatatgaattcgtcatctatgttagagaacatagaggaagat
gaagatgttcgagcagaaaggataagggtggaaaccggaggagccgaattcgacttggta
caactccagcgtctcacaaaaacctaccaacttatccacaaaaagatcatagctgtaaac
aatataagcataggtataccagctggagagtgttttggtcttctgggagtgaatggagca
gggaagaccactatcttcaaaatgttgactggagacatcatcgcaacaagtggaaaaatt
ctgatcagaaatcaaaccggaacccttggtcgagttgacacacactattcatcaattggc
tactgcccacaggaagatgctttagatgatctggtgactgtagaagagcatctgtacttt
tatgccagaatccatggaattccagagaaagacattaaggaaactgtttataaacttctt
tggagacttcagctgatgccctataaagaaaaatcaacatgtatgtgcagctatggcaca
aaaagaaaattatcaactgcaatagctttgattgggaagccatcaattctactattggat
gagccaagctctggaatggatcctaaatctaaacgacatctctggaagatcatttcagaa
gaagtacaaaacaaatgctcagtgatacttacttctcacagcatggaagaatgtgaagct
ctctgtaccagattggccattatggtgaatggaaggttccaatgcattggttctttacag
cacataaaaagcagatttggaagaggatttactgtaaaggttcattttaaaaacagtaaa
gcaaatatggaagttctgacacagttcatgcaactacacttcccaaaaacatatctaaag
gaccaacatcttagtatgctggagtatcatgtgccagtcacagcgggaggagtagcaaat
atatttgatctgctagaaacaaacaaggcagccttaaatatcacaaactttttagtgagt
cagacaactctggaagaggttttcattgactttgccaaagaccaaaaagcccatgtgaac
ttggaaacgagcagccaaggttccagcatcagtggcgactctcaggatgagcaacctgag
tcttag
DBGET
integrated database retrieval system
