Sarcophilus harrisii (Tasmanian devil): 100928806
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Entry
100928806 CDS
T02286
Symbol
ABCA12
Name
(RefSeq) ATP-binding cassette sub-family A member 12 isoform X1
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100928806 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100928806 (ABCA12)
Transporters [BR:
shr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100928806 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
AAA_30
AAA_23
RsgA_GTPase
AAA_22
SRP54
DUF4162
Motif
Other DBs
NCBI-GeneID:
100928806
NCBI-ProteinID:
XP_031813955
Ensembl:
ENSSHAG00000011632
LinkDB
All DBs
Position
3:67315657..67559008
Genome browser
AA seq
2601 aa
AA seq
DB search
MASHFHQLRILVWKNWLGVKRQPLWSLVLILWPVIIFIILAITRTKFPPIAKPTCYLAPR
NLPSTGFFPFLQTLLCDTDTKCKDTPYGPQDLLRRKGIDSTFFKESEIQRKSSNLRKDSN
SSPRSVKFPERRNTSLVFSSSRPDLENTVTDSISTFNSSQVLAQILKLEKMLKENSTSEN
LRREICENHPSYTVDDTFSWNTLGKNIFSQFCLSNITLLESSIQELRNQLSQISTNPNNQ
MIVFQESARVLSFFSQLQDQTALWRFLSSVPSLFQNDTKLNELLDILHNANSALLVVQKV
SPRVTNNEGFKTIQKSVKHLLYTLDSSDQGGPSNATSHWNEEGEEKLSPSSLAAQLLILE
NFEDALLNISAESPYVPYLMCVRNVTDNLVNESPENLKLLQSTIRFKKSFHRNGSYEDYL
PPVSEIIRSKLLQLRNVTKLLCESEIFDSIEETCQFPNISFGKLCEGSHFHMQFLEAAEL
GTEIAAGLLNHDNIISQKLKDLLTGDPNKINLNMDRFLEQVLQMNYLENITQLIPVVEPL
LHVNNSATASEKPGQLIDMFKNIDQLKVDLQRTTGMPNTSIDTLLAMPIPENRTEIISHI
FWLYPCDSNVTDLKLEVEMMEFCNLSIPERSRLSYLTGITLLHYLDIYNFTYKVFFPRED
QEPVDKVIELIIKLKVFLNQMVNGTQPLFDKMRSLKQIHLSRSVPLSQAIYRNHHVNGPE
GSFSTISQALCSQGITTDYLTAMLPSSQKPKGGNHTKDPLTYNLSKKQIALKYGIPLTAT
PFCFSLYKDIVNMPAGPVIWAFLKPLLLGKIMYAPYTPTTKAIMEKSNVTLRQLAELREK
SQEWMDKSPLFMNSFHLLNQTIPMLQNTLRNPFVQVFIKFSVGLDAVELLKQINELDILR
LKLQNNIGLIDQLNTLSSLTVNISSCVLYDRIQPAKTIAEMEMEAQKLYKNNELFGSVIF
KLPSNRTRQRKDNLDGSSLPPLIEYTIRMSLKTAQTTSSLRNKLWAPGPHNSPSQNQIYG
RAFIYLQDSIERAIIELQTGRNSQEIAVQVQAIPYPCFMKDNFLTSVSYSLPIVLMVAWV
VFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLLESIGFLLVTIIILIIILKFGNI
LPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLITVES
ELSFIVKTFMSLLSPTAFSYASQYIAQYEEQGIGLQWENMYSSPVHDDTTSFGWLCCLIL
IDSVIYFLIAWYVRNVFPGTYGVASPWYFPVLPSYWKEHFGCAEVKHEKSDSFLFTNIMM
QTTNISGSKTSPEYMFPPNLEPEPKDLTVGVALHGLTKMYGSKVAVDNLNLNFYEGHITS
LLGPNGAGKTTTISMLTGLFSATTGTIFIYGKDTRTDLDLIRKNMGVCMQHDVLFSYLTT
KEHLLLYGSIKVPHWNKKQLHEEVKRTLKDTGLYNHRHKRVGTLSGGMKRKLSISIALIG
GSRVVILDEPSTGVDPCSRRSIWEVITKNKTARTIILSTHHLDEAEVLSDRIAFLEHGGL
RCCGSPFFLKEAFGDGYHLILTKKKSPNLHSSKICNTLAVTSMIQSHLPEAYLKEDIGGE
LVYVLPPFNTKVSGAYLSLLRALDSGMSDLNIGCYGISDTTVEEVFLKLTKDTQKDGEMS
TEQFATKKTGVTKVNGMMTPDDLSMSSSSITTERDDKVLTRAERLDGVGLLLKKIVAILI
KRFHHTRRNWKGLIAQIILPVVFVTTAMGLGTLRNVGTVYPEIQLSPSLYGTYDQTAFFG
NSHPSTEPLVSAMLTFPGIDTICLNTSDTRCLKKGTLGQWNTSGEPITNFGVCSCSENIQ
ECPNFNYSPPHRTTYSSQVLYNLSGHHMENYLISTANEFTQKRYGGWSFGLPLTKDLQFD
ITTIPENRTLSKVWYDPEGYHSLPAYLNSFNNFLLRINMSDYDAARHGIVMYSHPYPGVQ
DQEQATISSLIDILVALSILMGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWITN
FIYDMVFYLVPVAMSIGVIAAFKLPAFSSENNLGAVSLLLLLFGYATFSWMYLLAGLFHE
TGMAFITYVCINLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGY
GLIELSQQQSVLDFLKAYGVEYPNETFEMNKLGAMFVALVVQGTVFFFLRLLINEWLIKK
IRILLRDMNSSSMLENIEEDEDVRAERIRVETGGAEFDLVQLQRLTKTYQLIHKKIIAVN
NISIGIPAGECFGLLGVNGAGKTTIFKMLTGDIIATSGKILIRNQTGTLGRVDTHYSSIG
YCPQEDALDDLVTVEEHLYFYARIHGIPEKDIKETVYKLLWRLQLMPYKEKSTCMCSYGT
KRKLSTAIALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEA
LCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHFKNSKANMEVLTQFMQLHFPKTYLK
DQHLSMLEYHVPVTAGGVANIFDLLETNKAALNITNFLVSQTTLEEVFIDFAKDQKAHVN
LETSSQGSSISGDSQDEQPES
NT seq
7806 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacacttccatcaactacggattctggtgtggaaaaattggctaggtgtcaaa
agacagccgctttggtcacttgtcctgattttatggcctgtcattattttcataattttg
gctattacccggacgaaattccctccaatagcaaaaccaacctgttaccttgcacctcga
aaccttcctagtactggctttttcccatttctgcaaacactactctgtgatacagatacc
aaatgcaaggatactccctatggaccacaagatttactgcgcagaaaaggaattgatagc
accttttttaaagaaagtgaaatccagagaaagtcatccaacctgaggaaggacagtaat
tcatcacctcggagtgttaaatttccagaaagaaggaatacatcactggtcttttccagc
tcaagacctgatttagaaaacaccgtaacagattccatctccacattcaacagcagtcag
gtgcttgcacagattctaaagttggaaaagatgctaaaggaaaattcaacttcagaaaac
cttagaagagaaatctgtgagaatcatccatcctatacagtggatgacactttttcgtgg
aacactctagggaaaaatattttcagccagttttgcctttccaacataactctcttagaa
tcatctatccaagaactaagaaaccagctctctcagatctcaactaaccccaacaatcaa
atgatagttttccaagaatcagccagagtgctgtcattcttttcacaactacaggatcaa
actgcattgtggcggtttctctcaagtgttcccagtttgttccaaaatgacacaaaatta
aacgagttattagatatcctccataacgcaaacagtgctctgttggtagtgcagaaggtt
tctccacgtgtcacgaataacgaaggattcaagaccatccagaagtctgttaagcatctg
ctctacactctggactcttcagaccaaggtggaccaagcaatgcaacatctcattggaat
gaggaaggtgaagaaaaattatctccaagcagtctggctgcccagctccttatcctggaa
aactttgaagatgccctcttaaacatttctgctgagagtccttatgtaccctacttgatg
tgtgtgagaaatgtaactgacaatttagtcaatgaatcaccagaaaatctaaaacttcta
caatctaccattcggttcaaaaaatcttttcatcgaaatggctcttatgaggactacttg
cctccagtttcagaaatcataagatcaaaactgctacaactccgaaacgtgaccaaactt
ctttgtgaatctgagatcttcgattcgatagaagaaacctgccagtttcctaatattagc
tttggaaagctatgtgaagggagtcacttccacatgcaattccttgaagcagctgagctc
ggcacagaaattgcagcaggtttactgaaccatgacaatatcatatctcagaagctaaag
gatttgcttactggggatccaaacaaaattaatttaaacatggatcggttcctagaacag
gtgttgcaaatgaattacttggaaaatatcacacagttaataccagtcgtagaacccttg
ctgcatgtcaataacagcgcaactgcttctgaaaaaccaggtcaattaatagatatgttt
aaaaatattgaccagctgaaagtagatctccagagaacaacaggaatgcccaatacaagt
attgatacactcttggcaatgcccatccctgaaaacagaactgagatcatttctcatata
ttctggctgtatccttgtgattctaatgtcactgatctgaaattggaagtcgaaatgatg
gaattctgcaacctatccattccagagagatcccgtctatcctatcttacaggaattaca
cttctgcattacttggacatttataactttacctacaaggtatttttccctagagaagat
caagagccagtagataaagtgatagaactcattataaaactgaaagtctttctcaatcaa
atggttaatggcacccaaccactgttcgacaaaatgaggtcactaaaacaaatacacctg
tctcgaagtgtgccattatcccaggcaatatatagaaaccatcatgttaacggccctgaa
ggatcatttagcaccatctctcaagccttgtgctctcaaggaatcactactgactactta
acagccatgttgccctcttcacagaagcccaaagggggcaaccacactaaagaccctttg
acctacaacttgagcaaaaaacaaatagctttaaaatatggaattcccttgactgcaaca
ccattttgcttttccctttataaagatatcgttaatatgcctgctggacctgtaatttgg
gccttcctgaaaccattgttattgggaaagattatgtatgcaccttataccccaaccaca
aaagcgattatggaaaagtctaatgtaacactgagacaactggcagaattgagagaaaaa
tctcaagagtggatggataagtcaccactattcatgaattcattccatctgttaaaccaa
accatcccaatgcttcagaatactctgaggaatccttttgtgcaagtttttataaaattc
tctgtgggattggatgccgttgaactcctgaaacagataaatgagcttgatattctaagg
ctaaaattacagaacaacatcggtctcattgatcagcttaatacactgtcttccttgaca
gttaacatttcctcctgtgtattatatgatcgcattcagccagcaaaaacaatagctgaa
atggagatggaagctcaaaagctatacaagaacaatgaactctttggaagtgttattttc
aagcttccttctaacagaaccaggcagagaaaagataatcttgatggcagctcccttcct
cctctaatagaatacaccatccgaatgagtctcaagacagcacaaacaaccagcagcctt
cggaacaagctctgggctcctggtccacataattctccatcacaaaaccagatctatggc
agagcattcatctacttacaggatagcattgaaagagctataattgaattgcagactggg
aggaattcacaggaaatagcagttcaagttcaagcaatcccctatccctgtttcatgaaa
gacaacttcttaaccagtgtttcttattcacttcctatcgtgcttatggtagcctgggtt
gtatttatagctgcctttgtgaaaaaacttgtttatgagaaagacctgcggctccacgag
tacatgaagatgatgggtgtgaattcctgcagccatttttttgcctggctcttggagagc
attggattcctgcttgttactatcattattcttattataatactcaagtttgggaatatc
ctccccaaaacaaatggattcatcttattcctatatttttcggactatagcttctctgtt
attgccatgagctacctcatcagtgtcttcttcaacaacactaatattgctgccctgatt
ggaagtctcatctacatcattgcctttttccccttcattgttctaattacagttgaaagt
gaattgagctttatagtcaagacattcatgagtctactgtccccgactgcattcagttac
gccagtcagtacattgcccaatatgaggaacagggcattggtcttcaatgggaaaatatg
tacagttctcccgtccatgatgataccacctcatttggctggttatgttgcctaattctt
attgattctgtcatttactttcttattgcgtggtatgttaggaatgttttcccagggact
tatggtgtggcttctccctggtattttccagttcttccttcctattggaaggagcacttt
ggatgtgcagaagtaaagcatgaaaaaagtgatagcttcctcttcaccaatattatgatg
cagaccaccaatatatctggcagtaagacaagtcctgagtatatgtttcctcctaatctg
gagcctgaaccaaaagatctcacagttggagttgctctccatggtctcaccaaaatgtat
ggctccaaagttgcagtggataatctcaatctgaatttttatgaagggcatatcacctca
ttgctggggcctaatggagctgggaaaaccactaccatttccatgttgactgggttattt
agtgctacaacaggcacaatatttatctatggaaaggacactagaactgatctggatctt
attcgaaagaacatgggtgtctgcatgcagcatgatgtcttattcagttatctaacaaca
aaggaacaccttcttctctatggatccatcaaggttcctcactggaacaaaaaacaacta
catgaggaagtaaaaaggactttaaaagatactggtctgtataatcatcggcataaaaga
gttgggacattatcaggaggaatgaagagaaaattgtccatttccattgcccttattggt
ggatcaagggttgtaattttagatgaaccttccactggagttgacccatgttcacgtcga
agtatatgggaagtcatcacaaagaataaaacagcaagaacaataattctctctacacat
catttggatgaagctgaagtgctcagtgacagaattgccttcttggagcatggaggcctt
aggtgctgtgggtccccctttttcctcaaggaagccttcggtgatggctaccatctcatt
ctcactaagaaaaagagcccaaatctacattcaagtaaaatatgtaacacattggcagta
acctccatgatccaatcacacctacctgaagcttatctcaaggaggatattggtggagaa
cttgtctatgtgctacccccattcaataccaaagtttctggagcctatctctctctccta
agagctcttgacagcggcatgagtgatcttaacattggctgctatgggatttctgatact
actgtggaagaggtgtttttgaaactgactaaagacacacagaaagatggagagatgagt
acagaacaatttgcaacaaagaaaactggagttactaaagtcaatggcatgatgacccct
gatgatctttctatgagcagcagcagcatcaccactgaaagagatgacaaagtcttgaca
agagcagagagactagatggggtgggacttttgctgaagaagatcgtggccattctcatt
aagcggttccaccatactcgtcgaaactggaaaggtctcatcgctcagattatcctccca
gttgtctttgtaacgacagcgatgggtcttggtacgctgagaaatgttggcacggtttat
cctgagatacagctttctccatccctttacggcacctatgaccagacagctttctttggg
aactctcacccaagcacagaaccattagtctctgcaatgcttactttccctggaatagat
accatatgtttgaacaccagtgatacgagatgtttaaagaaaggtactttaggtcaatgg
aatacaagcggagaacccatcactaactttggtgtctgttcctgttcagaaaatatccag
gaatgtcccaactttaactactccccacctcaccgaacaacgtattcttctcaagtcctt
tataacctcagtgggcatcacatggaaaattaccttatttcaacagctaatgaattcacc
caaaaaaggtatggaggatggagttttggattgcctctgactaaggatcttcaatttgat
ataacaaccattcctgaaaacagaacactttccaaggtgtggtacgatcctgaaggttat
cactcccttcctgcttacctcaacagcttcaacaacttccttcttcgaattaatatgtca
gactatgatgctgccagacatggtattgtcatgtatagccacccatacccaggtgtacaa
gaccaagaacaagctacgattagcagtttaattgatattttagtggctctctccatcctg
atgggctactccgtcaccacagcaagctttgtgacctatgttgtaagggaacatcagacc
aaagctaaacaactccagcacatctcaggcataggcgtgacatgttactggatcacaaac
ttcatttatgacatggttttctatctagtacctgttgcaatgtcaattggagttattgca
gctttcaagttacctgctttttccagtgaaaataatttaggggcagtatctctcctcctt
ctgctctttgggtatgcaacattttcttggatgtacttgttagcgggacttttccatgag
actggaatggccttcatcacttacgtttgcatcaacttgttctttggcatcaattcaatt
gtttcactgtcagtggtatattttctttccaaggaaaagcctaatgatccgactttggaa
ctcatctctgaaacccttaaacggattttcctgattttcccacaattctgttttggctat
ggtttgattgaactatctcaacaacaatctgttttagactttctaaaagcctatggagtg
gaatatcccaatgaaacttttgagatgaataaattaggcgcaatgttcgttgccttggtt
gttcaaggcactgtattctttttcttacgactcctaatcaatgaatggctgattaaaaaa
atcagaatcttactcagagatatgaattcgtcatctatgttagagaacatagaggaagat
gaagatgttcgagcagaaaggataagggtggaaaccggaggagccgaattcgacttggta
caactccagcgtctcacaaaaacctaccaacttatccacaaaaagatcatagctgtaaac
aatataagcataggtataccagctggagagtgttttggtcttctgggagtgaatggagca
gggaagaccactatcttcaaaatgttgactggagacatcatcgcaacaagtggaaaaatt
ctgatcagaaatcaaaccggaacccttggtcgagttgacacacactattcatcaattggc
tactgcccacaggaagatgctttagatgatctggtgactgtagaagagcatctgtacttt
tatgccagaatccatggaattccagagaaagacattaaggaaactgtttataaacttctt
tggagacttcagctgatgccctataaagaaaaatcaacatgtatgtgcagctatggcaca
aaaagaaaattatcaactgcaatagctttgattgggaagccatcaattctactattggat
gagccaagctctggaatggatcctaaatctaaacgacatctctggaagatcatttcagaa
gaagtacaaaacaaatgctcagtgatacttacttctcacagcatggaagaatgtgaagct
ctctgtaccagattggccattatggtgaatggaaggttccaatgcattggttctttacag
cacataaaaagcagatttggaagaggatttactgtaaaggttcattttaaaaacagtaaa
gcaaatatggaagttctgacacagttcatgcaactacacttcccaaaaacatatctaaag
gaccaacatcttagtatgctggagtatcatgtgccagtcacagcgggaggagtagcaaat
atatttgatctgctagaaacaaacaaggcagccttaaatatcacaaactttttagtgagt
cagacaactctggaagaggttttcattgactttgccaaagaccaaaaagcccatgtgaac
ttggaaacgagcagccaaggttccagcatcagtggcgactctcaggatgagcaacctgag
tcttag
DBGET
integrated database retrieval system
