Sarcophilus harrisii (Tasmanian devil): 100928834
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Entry
100928834 CDS
T02286
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05200
Pathways in cancer
shr05222
Small cell lung cancer
shr05223
Non-small cell lung cancer
shr05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100928834 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
100928834 (RARB)
05222 Small cell lung cancer
100928834 (RARB)
05223 Non-small cell lung cancer
100928834 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100928834 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
shr03310
]
100928834 (RARB)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100928834 (RARB)
Nuclear receptors [BR:
shr03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
100928834 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100928834
NCBI-ProteinID:
XP_003772080
Ensembl:
ENSSHAG00000009801
UniProt:
G3W7J4
LinkDB
All DBs
Position
5:261995329..262152884
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AA seq
517 aa
AA seq
DB search
MTIRINYRLLAVLSVIIHDSALGKRPAAQRAKKGAELDGVGWTSPVPPASPPLEEKALLQ
TFSRERGETMFDCMDVLAVSPGQILDFYTASPSSCMLQEKALKACFSGLTQSEWQRRHTA
QSIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQK
NMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDKNKKKKEPSKQEFTESY
EMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIK
IVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMH
NAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEA
LKIYIRKRRPNKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSE
GHEPLTPSSSGNTAEHSPSISPSSVENSGVGQSPLVQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaccattcggatcaattacaggcttttagcggtgttgtctgtcataattcatgattcg
gctctgggaaaaagaccagcagcccagcgtgccaagaaaggggcagagttggatggagtt
gggtggacttctcccgtgcctcctgcctctccacccctagaggagaaagcacttttgcag
acattcagtagagagaggggagagaccatgtttgactgtatggatgttctcgcagtgagc
cctgggcaaatcctggacttctatactgcgagcccgtcttcttgcatgctccaggagaaa
gccctcaaagcatgcttcagtggattgacacaatcagagtggcagcgccggcacactgct
caatccatcgaaacacaaagcaccagttctgaggagcttgtccccagccctccttctcca
ctccctcctcctcgtgtttacaagccctgcttcgtatgccaggataagtcatctggctac
cactatggggtcagcgcttgcgagggatgtaagggctttttccgcagaagtattcagaag
aacatgatttatacttgccaccgagataagaactgtgtgattaacaaagtcaccaggaac
cgttgccagtactgccgcctccagaagtgctttgaagtggggatgtccaaagaatctgtc
agaaatgataagaataaaaagaagaaagagccttcgaagcaggaattcacagaaagctat
gagatgacagcagaattggatgatctcaccgaaaaaatcaggaaagctcaccaggaaacc
ttcccatcgctctgccagctggggaaatacaccacgaattccagcgccgatcaccgtgtg
cgcctggacctgggcctctgggacaagttcagcgagctggccaccaagtgcattatcaaa
atcgtggagttcgccaagaggttgcccggcttcaccggcctgaccatcgccgatcagatc
acgctcctgaaggccgcctgcctcgacatcttgattcttagaatctgcacaagatacaca
cctgaacaagacacgatgaccttttctgacggccttaccttaaaccgaacccagatgcac
aatgccggctttggacctctcaccgatctggtgttcacctttgccaatcagctcctgcct
ttggaaatggatgacacagaaacgggccttcttagtgccatctgcttaatctgtggagat
cgtcaggacttagaggaaccaacaaaagtggacaagctacaagaaccattgctggaagca
ctgaaaatttacatcagaaagaggcgacccaacaagcctcatatgtttccaaagatccta
atgaaaatcacagatctccgtagcattagtgcaaaaggtgcagaacgtgtgattaccttg
aaaatggaaatccctggctcgatgccccctctcattcaggaaatgctggagaattctgaa
ggacatgaacctctgacaccaagttctagtggcaatacagcagagcacagtcctagcatc
tcacccagctccgtggagaacagtggggttgggcagtccccactggtgcaataa
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