| Entry |
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| Symbol |
SMARCD1
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| Name |
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
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| KO |
| K11650 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D |
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| Organism |
shr Sarcophilus harrisii (Tasmanian devil)
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| Pathway |
| shr03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:shr00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100928991 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100928991 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100928991 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:shr03021]
100928991 (SMARCD1)
03036 Chromosome and associated proteins [BR:shr03036]
100928991 (SMARCD1)
Transcription machinery [BR:shr03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100928991 (SMARCD1)
Chromosome and associated proteins [BR:shr03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100928991 (SMARCD1)
PBAF complex
100928991 (SMARCD1)
GBAF(ncBAF) complex
100928991 (SMARCD1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:complement(92868949..92879068)
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| AA seq |
515 aa
MAARAGFQSVAPSGGAGAASGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGIDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAAL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT |
|---|
| NT seq |
1548 nt +upstreamnt +downstreamnt
atggcggcccgggctggtttccagtcagtggctccgagcggcggcgctggagctgcgtca
ggggcgggcgcagcggccgctctgggcccgggtgggaccccggggcccccagtgcgaatg
ggcccggcacctggccaagggctctaccgctccccgatgcccggagcagcctatccgcgt
ccaggcatgttgccagggagccgtatgacacctcagggaccttctatgggacctcctggc
tatggggggaacccttcagttcgacctggtctggcccagtcaggaatagatcagtcccga
aagagaccagctcctcaacagattcagcaggtccagcaacaggcagtccagaatcgaaat
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgagttg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggatcagacc
atcatgaggaaacgactagatatccaggaagccttaaaacgacctatcaagcaaaaacgg
aaacttcgtattttcatttcgaatactttcaatccagctaaatcagatgctgaagatggg
gaaggaactgtggcttcctgggagcttcgggtggaagggcggctcctcgaggattcagct
ctgtctaaatatgatgctaccaaacagaagcgtaaattctcctccttctttaagtctttg
gtgattgagctggacaaagatttatacgggccagacaaccacctggtggaatggcacagg
actgctaccactcaagagacagatggcttccaggtgaagcggccaggagatgtaaatgtt
cgttgcactgttttgctgatgctagattaccagcctcctcagtttaaattggatccccgt
ctggcccggcttttgggtattcatacccagacacgtccagtgattattcaagcactgtgg
cagtacatcaagactcataagcttcaggatccccatgaacgggagtttgttatctgtgac
aaatacctccagcagatattcgagtcacaacggatgaagttctcagagatcccccagcgg
ctccatgccttgcttatgccaccagagcccatcatcattaatcacgtcatcagcgttgac
cccaatgaccagaagaagactgcctgttatgacattgatgtggaagtggatgataccctc
aagactcagatgaactccttcttgctatctactgcaagccagcaggaaattgctgctcta
gacaacaagatccatgagacaatagagaccatcaaccaactgaaaacccagagagagttc
atgctgagttttgcaagagatccccaaggcttcatcaatgactggcttcagtcccagtgc
cgggatctgaagaccatgactgatgtagtgggtaatccggaggaggaacgccgagctgag
ttctacttccagccatgggctcaggaggctgtgtgcagatacttctactctaaggtgcaa
cagagacggcaggaactggagcaggccttgggcatccgaaatacataa |
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