Sarcophilus harrisii (Tasmanian devil): 100928991
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Entry
100928991 CDS
T02286
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082
ATP-dependent chromatin remodeling
shr04714
Thermogenesis
shr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100928991 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100928991 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100928991 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100928991 (SMARCD1)
03036 Chromosome and associated proteins [BR:
shr03036
]
100928991 (SMARCD1)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100928991 (SMARCD1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100928991 (SMARCD1)
PBAF complex
100928991 (SMARCD1)
GBAF(ncBAF) complex
100928991 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
100928991
NCBI-ProteinID:
XP_031793782
Ensembl:
ENSSHAG00000006504
LinkDB
All DBs
Position
5:complement(92868949..92879068)
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGAASGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGIDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAAL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggctggtttccagtcagtggctccgagcggcggcgctggagctgcgtca
ggggcgggcgcagcggccgctctgggcccgggtgggaccccggggcccccagtgcgaatg
ggcccggcacctggccaagggctctaccgctccccgatgcccggagcagcctatccgcgt
ccaggcatgttgccagggagccgtatgacacctcagggaccttctatgggacctcctggc
tatggggggaacccttcagttcgacctggtctggcccagtcaggaatagatcagtcccga
aagagaccagctcctcaacagattcagcaggtccagcaacaggcagtccagaatcgaaat
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgagttg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggatcagacc
atcatgaggaaacgactagatatccaggaagccttaaaacgacctatcaagcaaaaacgg
aaacttcgtattttcatttcgaatactttcaatccagctaaatcagatgctgaagatggg
gaaggaactgtggcttcctgggagcttcgggtggaagggcggctcctcgaggattcagct
ctgtctaaatatgatgctaccaaacagaagcgtaaattctcctccttctttaagtctttg
gtgattgagctggacaaagatttatacgggccagacaaccacctggtggaatggcacagg
actgctaccactcaagagacagatggcttccaggtgaagcggccaggagatgtaaatgtt
cgttgcactgttttgctgatgctagattaccagcctcctcagtttaaattggatccccgt
ctggcccggcttttgggtattcatacccagacacgtccagtgattattcaagcactgtgg
cagtacatcaagactcataagcttcaggatccccatgaacgggagtttgttatctgtgac
aaatacctccagcagatattcgagtcacaacggatgaagttctcagagatcccccagcgg
ctccatgccttgcttatgccaccagagcccatcatcattaatcacgtcatcagcgttgac
cccaatgaccagaagaagactgcctgttatgacattgatgtggaagtggatgataccctc
aagactcagatgaactccttcttgctatctactgcaagccagcaggaaattgctgctcta
gacaacaagatccatgagacaatagagaccatcaaccaactgaaaacccagagagagttc
atgctgagttttgcaagagatccccaaggcttcatcaatgactggcttcagtcccagtgc
cgggatctgaagaccatgactgatgtagtgggtaatccggaggaggaacgccgagctgag
ttctacttccagccatgggctcaggaggctgtgtgcagatacttctactctaaggtgcaa
cagagacggcaggaactggagcaggccttgggcatccgaaatacataa
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