Sarcophilus harrisii (Tasmanian devil): 100929022
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Entry
100929022 CDS
T02286
Symbol
RBL1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04110
Cell cycle
shr04218
Cellular senescence
shr04350
TGF-beta signaling pathway
shr05165
Human papillomavirus infection
shr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100929022 (RBL1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100929022 (RBL1)
04218 Cellular senescence
100929022 (RBL1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100929022 (RBL1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100929022 (RBL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100929022 (RBL1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
100929022 (RBL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
Motif
Other DBs
NCBI-GeneID:
100929022
NCBI-ProteinID:
XP_031809897
Ensembl:
ENSSHAG00000016934
UniProt:
A0A7N4V102
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Position
2:complement(430518335..430575132)
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AA seq
1065 aa
AA seq
DB search
MFQDELRGLGAAGVGAAREALQALCQELNLDEGSAAEALGDFMAIRSTYSLEGEVVHWLA
CALYVACRKSVIPTVGKGIMEGNCVSLTRILRSAKLSLIQFFSKMKKWIDMSNLPQEFRE
RIDRLERNFEVSTVIFKKFEPIFLDIFRNPYEDPPKLPRSRKQRRVPCTVKDLFNFCWTL
FVYTKGNFRMIGDDLVNSYHLLLCCLDLTFTNAIMCPNRKDLLNLSFKGLPPDFHISDFR
TSEEPPCIIATLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGDCLLDISCFADNSK
AVNKEYEEYVLTVGDFDERVFLGADAEEEIGSPQKFTSDTPTGKLIARVHVEYNLQQHFA
KKRSFAPSTPLTGRRYLREKEAATTPVASATQSVSRLQNIVAGLKNAPSEQLVNIFESCV
RNPMENIMNIVKSIGEAFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQET
RRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRSFPWIIEVLDLSPFYFYKVIEIL
IRSEEGLSRDTVKHLNSIEEQILESLAWSNDSALWDALLISENKVPTCEEVIFPNNLETG
NVQGHLPMMPLSPIVHPRVKEVRTDSGSLRRDMQPLSPISVHERYSSPTAGSAKRRLFGE
DTSSKLFADKTATEGTKLKIASSSAIIAENISVLPGQNLLTVTSAAVTGTTGQKVTIPLH
GIATDTGGITVIPMPVNSSEQTSVDSPMQIPITSQSLSCTSPKQTYATKSLEMQQAGVSR
PKRTGSLALFYRKVYHLASVRLRDLCLKLDISNDLRRKIWTCFEFTLVHCFDLMKDRHLD
QLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLKRIPKEVSTYDKNVKDN
EMTECDLDCAKIPDSSTGTMKEERGDLIKFYNEVYVGRVKSFALKYDLSNEDHVMEALPL
SPFPNIKQQPVSPRRISQQHSVYVSPHKNGACLTPRTALLYRFNGSPSKSLKDINNMIKH
GEQRSKKRALTIDGDTQSPTKRLCQENDDVLLKRLQDVVSERANH
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacgagcttcgtggcctgggggcggccggggttggggccgcccgggaggcg
cttcaggccctttgtcaggagctgaacctagacgagggcagtgcagccgaagccctgggc
gacttcatggccattcgcagcacctacagcctggagggagaagttgtacattggttggca
tgtgcattatatgttgcttgtcggaaaagtgttattcctacagttggaaagggcatcatg
gaaggaaattgtgtatcactgaccagaatactccggtcagccaaattgagtttaattcag
ttttttagtaaaatgaagaagtggatagacatgtcaaacctgccacaggaatttcgtgag
cgcatagacaggctggagagaaactttgaggtgtcaactgtgattttcaaaaaatttgaa
ccaatttttttggacatatttagaaatccatatgaggatccaccaaagttgccacggagt
agaaaacagagacgagttccttgcactgttaaagatctctttaacttctgttggacactc
tttgtctataccaaaggtaactttcgtatgattggagatgatttagtaaattcttatcat
ttacttctgtgctgcttggatttaacttttacaaatgccattatgtgcccaaatagaaaa
gatttgctgaatttatcattcaaaggtttgccacctgatttccatatttctgactttaga
acctctgaagaaccgccttgtattattgccacactctgtgaactgcatgatggacttcta
gtagaagcaaaagggataaaggagcattattttaaaccatacatttcaaaactatttgat
agaaagattttaaaaggagactgtctcttggatatttcctgttttgcagataatagcaaa
gcagtaaataaggaatatgaagaatatgttcttacagttggtgattttgatgaaagggtg
ttcttgggagcagatgcagaagaggaaattggaagtcctcagaagtttacaagtgatacc
cctacaggaaaattgattgcaagagtccatgtggaatataaccttcagcagcattttgcg
aaaaaaagatcttttgccccctctactccactgactggacgtcggtatctgcgggaaaaa
gaagctgctaccactcctgtagcttcagcaacccaaagtgtgagccgattacagaacatt
gtagctggactgaaaaatgcaccaagcgagcaacttgtgaatatttttgagtcttgtgta
cgcaatcctatggaaaacatcatgaacatagtaaaaagcattggagaagctttttgtcaa
cactatactcagtcaacagatgagcaaccgggatctcacatagattttgctgtaaatcga
ctaaaattagcagagattttatactataaaatattagaaaccataatggttcaggaaaca
cgacgacttcatggaatggacatgtctgttcttttggagcaggatatatttcatcgttct
ttgatggcttgctgtttggaaattgtgctgtttgcatatagttcacctcgtagttttccc
tggatcattgaagttcttgatctaagtccgttttacttttataaggtcattgaaatattg
attcggtccgaggaagggctatcaagagatacagtaaagcaccttaacagcattgaagaa
cagattctggaaagtttagcatggagcaatgattctgcattgtgggatgctctcctcatt
tctgaaaataaagttcctacttgtgaagaagtcatatttcctaataacttggagacagga
aatgttcaaggtcatctcccaatgatgccgttatctcccatagtgcaccctcgtgtaaaa
gaagttaggactgacagtgggagtcttcgacgggatatgcagccattatctccaatatct
gttcatgagcgttacagttctcctactgccggaagtgctaagagaagactttttggagag
gatacttcctcaaaactgtttgcagataaaactgcaacagaaggaaccaagttgaaaatt
gcttcatcttcagctattattgctgaaaatatatctgttttacctggacagaatctttta
actgtgacatcagctgcagtaacaggaacaacgggacaaaaagttacaataccattgcat
ggtattgctactgatacaggagggatcacagtaatacctatgccagtgaattcaagcgag
caaactagtgtggacagccctatgcaaataccgattacttctcagtcattaagttgtact
tctccaaaacagacctatgcaacaaaatctctagaaatgcagcaggcaggagtaagccga
ccaaaaagaactggatccctggcactgttttataggaaggtctatcatttggcaagtgta
cgtttacgtgatttgtgcttaaaactagatatttccaatgacttgagaaggaagatatgg
acatgttttgagttcacattagtacattgctttgatctaatgaaagacagacatttggat
cagcttctcctatgtgctttttacattatggcaaaggtaacaaaagaagaaagaactttt
caagacataatgaaaagttacaggaatcagccccaagcaaatagtcatgtttatagaagt
gttctgttgaaaagaattccaaaagaagttagcacatatgataaaaatgtaaaagataat
gaaatgacagagtgtgatttagattgtgcaaaaataccagacagttccacaggaacaatg
aaagaggagagaggtgatcttatcaaattctacaatgaggtttatgtaggaagagtgaaa
tcatttgcactaaaatatgatttgtcaaatgaagatcatgtgatggaagctctacctctg
tctcctttcccaaacattaagcagcagccagtgtcacctcgtcggatttctcaacaacac
tccgtttatgtatcccctcacaagaatggagcctgccttaccccaagaacagctctcctc
tacaggttcaatggtagtccttccaagagtttgaaagatatcaacaatatgattaaacat
ggtgaacaaagaagcaagaaacgagcattaaccattgatggtgatacccaatcacctact
aagcgcctctgccaggaaaatgatgatgtattactgaaacgactacaagacgttgtcagt
gaaagagccaatcattaa
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