Sarcophilus harrisii (Tasmanian devil): 100929096
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Entry
100929096 CDS
T02286
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100929096 (PRDM11)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100929096 (PRDM11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
FOG1-like_PR
Zn_ribbon_PRDM4
Dimer_Tnp_hAT
Phage-scaffold
DUF7822
DUF4954
Motif
Other DBs
NCBI-GeneID:
100929096
NCBI-ProteinID:
XP_031798672
Ensembl:
ENSSHAG00000009819
UniProt:
A0A7N4PX11
LinkDB
All DBs
Position
6:230998707..231088496
Genome browser
AA seq
1280 aa
AA seq
DB search
MGGGGGGEGEGSRGLQNRQMDLLSWIREHPLLPEEGQLPALAWMKHLGEPQVGSSWIGSA
LPHSQVTGLASGSARSCRNRVFPPGFGATRVPGAHGSNRMTENLKACLAHTQASMGEMVT
VKTEVCSPRQDQEYGQPCSGRPDPSSMEVEPKKPKGKRELIMTKSFQQVDFWFCESCQEY
FVDECPNHGPPVFVSDTPVPMGIPDRAALTIPPGMEVVKEASGQNDVRCMNEVIPKGHIF
GPYEGQISTQDKSAGFFSWLIVDKNNHYKSIDGTDETKANWMRYVIISREEREQNLMAFQ
HSEKIYFRVCRDIRPGERLRVWYSEDYMKRLHSMSQETIQRNLTRGDKKLPREKPEKALD
HPEDLRGPLQLTVLRHGKSAYKRGFDEVDAHPPPKKKKIDLIFKDVLEASLETAKIEEPP
LAPGTPLVLRKAPKFHAEDVYDQCGMAVPHEPQDLSRNQGEKEWKAPQGASYGPSKDTSL
LEDEEEEPSSFKADSPAEASLASDLHELPTTSFCPNCIRLKKKIRELQAELDMLKSGKLP
EPPLLPPQVPELPEFSDPTASESVVSVPTMLEDDDQEVDSADESVSNEMIAATDEPSKMS
SATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTI
KLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLALEGRPYFDFRPLAELLR
KCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPFLSIILDGQSDDVLADTVAVY
VQYTSSDGPPATEFLSLQELGFSTTDSYLQALDRAFSSLGIRLQDEKPTIGLGVDGANIT
ASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPCLEELENNLKQLLSFYRY
SPRLMCELRLTASTLCEETEFLGDIRAVRWIIGEQNVLNALIKDYLEVVAHLKDVSGQTQ
RADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYIFQGEYLLVSQVDDKIEEAIQ
EISRLADSPGEYLQEFEENFRESFNGVAVKNLRVAEAKFQSIREKICQKTQVILAQRFDS
RSRTFVKACQVFDLAAWPRSTEELMSYGKEDMVQIFDHLEAIPSFSREICREGMDPRGSL
LMEWRELKADYYTKNGFKDLISHICKYKQRFPLLNKIIQILKVLPTSTACCEKGRVALQR
VRKNNRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEKSGNSYTLSAEVLSRMSA
LDQKPMLPSMDHGSEFYSDL
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggggggggggggggggggggaaggggaaggaagcagagggctccagaacaggcagatg
gacctactgtcatggatccgggagcacccgctcctgcctgaagaggggcagctcccggcc
ctggcgtggatgaagcacctgggggagccccaggtaggatcctcctggattggctcagcc
ttgcctcattcccaggtcactggattggcatctgggagcgccaggagctgccgcaacagg
gtcttccctccaggctttggcgctacgagggtccccggggcccatgggtcgaacagaatg
actgagaacctgaaggcctgcttggctcatacccaggcttccatgggggagatggtgact
gtgaagacagaggtctgctcaccccgacaggaccaagaatatggccagccctgctccgga
aggcctgacccttcatccatggaagtggaacccaagaaaccgaaggggaagcgagagctg
atcatgaccaagagtttccagcaagtagacttctggttctgtgagtcctgccaagaatac
tttgtggatgaatgccccaaccatggcccccccgtgtttgtgtccgatacgcccgtgccc
atgggcatccctgaccgagcggccctcaccatcccgcctggcatggaggtggtcaaggag
gccagtgggcagaatgacgttcgctgcatgaatgaggtcatcccgaaggggcacatcttc
gggccgtacgaagggcagatctcgacacaggataaatcggccggcttcttctcctggttg
attgttgataagaataaccattacaagtctatcgatgggacagatgaaaccaaagccaat
tggatgagatatgtgatcatctcacgagaagagagagagcaaaatctgatggccttccag
catagtgagaaaatctacttccgagtgtgccgtgatatccgacctggggagcggttacga
gtgtggtacagtgaggattatatgaaacgtctacacagcatgtcccaggaaacaatacag
cgcaatctgaccagaggagataaaaagctgccgcgagagaagcctgagaaggctctggac
cacccggaggaccttcggggccctctccaactcacggtcttgaggcacggcaagagcgcc
tacaagcgtggctttgatgaggtggatgctcatcctccgcccaagaagaagaagatcgac
ctcatcttcaaggacgttttggaggcttccctggagacagcaaagatagaggagccccct
ctggccccaggcaccccccttgttctcaggaaagctcccaagttccacgcggaagacgtg
tatgatcagtgtgggatggccgtgccccacgagccccaggatctctccaggaaccagggg
gagaaggagtggaaggctccccaaggggcttcctatggtccctccaaggacacaagtttg
ctggaggatgaggaggaagagccttcgtcattcaaggcagacagccctgccgaggcttcc
ctggcgtccgaccttcacgagctccccaccacctccttctgccctaactgtatccgcctg
aagaagaagataagggagctgcaggctgaactggatatgctcaagtctgggaagctgccc
gagccccctctgctgccaccccaggtaccggagctcccagagttttcagaccccacagcc
tcagagagcgtggtctctgtcccaaccatgctggaggacgacgaccaggaggtggactcg
gccgacgagtccgtctccaacgagatgatcgccgccacggacgagccttccaagatgtcc
tccgccacggggcgccgcatccggcgcttcaagcaggagtggctgaagaagttctggttc
ctacggtactcccccacgctcaacgagatgtggtgccacgtgtgccgccagtacacggtg
cagtcttcccggacctcggccttcatcatcggctccaagcagttcaagatccacaccatc
aagctccacagccaaagcaacctgcacaagaaatgcctgcagctctacaagctccgcatg
caccccgagaaaacggaggagatgtgccggaacatgactctgctcttcaacaccgcctac
cacctggccctggagggccggccctattttgatttccggcccttggcggagctgctgagg
aagtgcgagctcaaggtggtggaccagtacatgaacgaaggcgactgccagattctgatc
caccacatcgcgcgggctctgcgggaggacctggtggagcgcatccgccagtccccgttc
ctcagcatcatcctggacgggcagagcgacgacgtgctggccgacaccgtggctgtctac
gtgcagtacaccagcagcgacgggcccccggccactgagttcctgtccctgcaggagctg
ggtttctccaccacggacagttacctccaagcgctggatcgcgccttctcctccctgggg
atcaggctgcaggacgagaagccgaccatcggcctgggggtggacggggccaacatcacg
gccagtttgcgcgccagcatgttcatgaccatcaggaagactctgccttggctgctctgt
ctgcccttcatggtgcaccggccccacctggaaatcctggacgccatcagcggaaaggag
ctcccgtgcctggaggagctggagaacaacctgaagcagctgctgagcttctaccgctac
tccccccgcctgatgtgcgagctccggttaacagcctccaccctctgcgaggagacggag
ttcctgggggacatccgcgccgtgaggtggatcatcggggagcaaaacgttctcaatgca
ctaatcaaggactacctggaggtggtggcccacctcaaggacgtcagcggacagacgcag
cgcgccgacgcctcggccatcgctctggccctgctgcagtttctcatggactatcagtcc
atcaagctgatttacttcttactcgatgtgatcgccgtgctttcccgcctggcctacatc
ttccagggcgaatacctcctcgtgtcccaggtggacgacaagatcgaggaggccatccag
gagatcagtcggctggccgactctccgggggagtacctgcaagagttcgaggagaatttc
cgagagagcttcaacggagtcgcggtgaagaacctgcgggtggccgaagccaaattccag
tccatccgggagaagatctgccagaaaacgcaggtgatcttggcccagaggttcgattcc
cgcagccggacctttgtgaaagcctgccaggtgttcgacctggcagcctggcccaggagc
accgaggagctcatgagctacggcaaagaggacatggtccagatcttcgaccatctggaa
gccatcccatccttctccagggagatctgccgagaagggatggaccccaggggaagcttg
ttgatggagtggcgggaactcaaggcggactactataccaaaaatggtttcaaagacttg
atcagccatatctgcaagtacaaacagaggtttcccctgttgaataaaatcatccagatc
cttaaggtcctccccacctccacggcctgctgcgagaaagggcgggtagccctccagcga
gtgcgcaaaaacaaccgctcccgcctgaccttggaacagctcagtgaccttttgacaatt
gctgtaaatggtccccccattgccaattttgatgccaagagggcactggatagctggttc
gaggagaagtctggcaatagttacacactgtctgctgaagtcctcagtaggatgtctgcc
ctggaccagaagccaatgcttccaagcatggaccacgggtcagaattttactcggatctt
tag
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