KEGG   Sarcophilus harrisii (Tasmanian devil): 100929187
Entry
100929187         CDS       T02286                                 
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03410  Base excision repair
shr05166  Human T-cell leukemia virus 1 infection
shr05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100929187 (POLB)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100929187 (POLB)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100929187 (POLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shr03400]
    100929187 (POLB)
Enzymes [BR:shr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100929187 (POLB)
DNA repair and recombination proteins [BR:shr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100929187 (POLB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     100929187 (POLB)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f HHH_8 DNA_pol_B_thumb HHH_5 Cdd1 HHH_2 IMS_HHH_1 NTP_transf_2 DUF3900
Other DBs
NCBI-GeneID: 100929187
NCBI-ProteinID: XP_031806634
Ensembl: ENSSHAG00000017892
UniProt: G3X095
LinkDB
Position
2:129290605..129318500
AA seq 335 aa
MSKRKAPQETLNAGITDFLTELANYERNVNRAIHKYSAYRKAASVIAKYPSQIKSGAEAK
KLDGVGAKIAEKIDEFLATGKLRKLEKIRQDDKSSSINFLTRVSGIGPSAARKLVDEGIK
TLEDLRKNESKLNHHQRIGLRYFEDFEKRIPREEMLQMQDIVLNEIKKVDSKYIATVCGS
FRRGAESSGDMDILLTHPSFTSESAKQPKLLHQVVEQLQKVHFITDTLSKGDTKFMGVCQ
LSSEDEEVAYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagcaaacggaaggcgccgcaagagactctcaacgcgggcatcaccgacttcttgacg
gagcttgcaaattatgagaggaatgtgaatcgggcaatccataagtacagtgcttacaga
aaagcagcctctgtgatagccaagtatccaagccaaataaagagtggagcagaagcaaag
aaactggatggagtaggagcaaaaattgctgaaaagattgatgaatttttagctactgga
aaattacgtaaactggaaaagattaggcaggatgataaaagttcttccatcaatttcctg
acacgagttagtggtattggaccatcagctgcaaggaagcttgtagatgaagggattaaa
acattggaagatcttaggaaaaatgaaagcaaattgaaccatcatcagcgaattgggctg
agatattttgaagactttgagaagagaattcccagagaagagatgttacaaatgcaagat
attgttttgaatgaaattaagaaagttgattcaaaatatattgctacagtctgtggaagt
ttccgacgtggtgcagagtcaagtggagatatggatattctcctcacccatcctagtttc
acttctgaatcagctaaacagcctaagctgttgcaccaagttgtggaacaactgcagaaa
gtccacttcatcacagatactttgtccaagggagacacaaagtttatgggtgtttgtcag
ctgtcaagtgaagatgaagaagttgcatatccatatagaagaattgatatcagattgatt
cccaaggaccaatattactgtggtgttctttacttcactggcagtgatattttcaataag
aatatgagggcccatgccctagaaaagggtttcacaatcaatgagtatacaatccggccc
ttgggagtcactggagttgctggagagccgctcccagtggacagtgaaaaagatatattt
gactatattcagtggaaataccgagaacctaaggacagaagcgagtga

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