Sarcophilus harrisii (Tasmanian devil): 100929214
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Entry
100929214 CDS
T02286
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03250
Viral life cycle - HIV-1
shr03272
Virion - Hepatitis viruses
shr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100929214 (PDCD6IP)
03272 Virion - Hepatitis viruses
100929214 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100929214 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100929214 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100929214 (PDCD6IP)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100929214 (PDCD6IP)
Exosome [BR:
shr04147
]
Exosomal proteins
Proteins found in most exosomes
100929214 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Ly49
Motif
Other DBs
NCBI-GeneID:
100929214
NCBI-ProteinID:
XP_031807222
Ensembl:
ENSSHAG00000000968
UniProt:
G3VD27
LinkDB
All DBs
Position
1:1012835..1031154
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AA seq
877 aa
AA seq
DB search
MATFVTVQLKKAAEVDVARPLTKFIQQTYPAGGEEATQFGKAAEELSRLRRAALGRPLDR
HDAALDTLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
TCVLFNCAALASQIAADQNLDNDEGLKVAAKHYQFASGAFLHIKETVLSALNREPTADIA
PDTTGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYYGDAFKQCQYKDTLPKE
VFPVLAAKHCVMQAHAEYHQAVLAKQQKRFGEEIARLQHAAELIKTVASRYDEYISVKDF
SDKIARALTAARKDNDFIYHDRVPDLKDLEPIGKATLVKATPVHVPLSQKFTDLFEKMVP
VAVQQSLACSNQRKADLVNRLIAQMRESTNLANGVLASLNLPAAIEDISGDTVPQSILGK
SAAIVEQGGIHTVDQLIQDLPELLQRNREILEEALRLLNEEEATDNELKAKFKERWQRTP
SNELYKPLRAEGNNFQAVLDKAVQADGQVRERYQSHRDTIALLSKPEPELNAAIPSANPA
KTMQGSEVVTVLKSLLANLDEVKKEREHLENDLKSMTFDMRGKFLSALAQDGAINEEALS
VTELDRVYGGLTNRVQDSLKKQEELLESIQVSHQEFSKMKQSNNEANLREEVLKNLAVAY
DNFVELVANLREGTKFYNELTEILLKFQNKCSDIVFARKTERDELLKDLQQSIAREPSAP
SLPAPAYQTSPAAGGNAAPPTPAPRTMLPSKPQPPARPPPPVISASRTASASAMGTPTPP
PAPSPTPGLPASGSAPGAAPGTAPSQAQGPPYPTYPGYPGYCQMPMPMGYNPYVYGQYTL
PYPPAYPQNPAPAPYPGPQQPHYPFPSAPQQPHYPQQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcgtgacggtgcagttgaagaaggcggccgaggtggacgtggcgcggccg
ctgaccaagttcatccagcagacgtacccggcgggcggcgaggaggcgacgcagttcggc
aaggccgccgaggagctgagccgcctgcgccgggccgcgctcggccgccctctggaccgc
cacgacgcggcgctggacacgctgctgcggtattatgatcagatttgttccatcgagccc
aaattcccattttctgaaaaccagatctgcttgacctttacctggaaggatgcgtttgac
aaaggatcgctttttggagggtctgtaaaactggcgctcgcgagtttaggctacgaaaag
acgtgtgtgctgttcaactgtgcggccttagccagccagatcgcggcagaccagaatctg
gacaacgatgagggattgaaggtcgccgctaagcattatcagttcgctagcggcgccttc
ttgcacatcaaggagactgtcttgtctgcgctgaatcgagaacctacggccgatatagct
cctgacaccacggggaccctgagtctcatcatgctggcccaagcccaagaggtgttcttc
ctcaaggccaccagagataaaatgaaagatgccatcatagcaaaactggccaatcaggct
gctgattactacggagacgcgttcaagcagtgtcagtacaaggacaccctccccaaggaa
gtgttccccgtcctggcggccaagcactgcgtgatgcaggcgcacgcggaataccaccag
gcagtgctggccaagcagcagaagagatttggggaggagatcgccaggctgcagcacgcg
gcagagctgattaaaacggtggcgtctcggtacgacgagtacatcagtgtgaaggacttc
tccgacaagatcgcccgggccctgacggccgccaggaaggacaacgacttcatctaccac
gaccgggttccagacctgaaagacctggagcccatcggcaaagccacgctggtgaaagcc
acgcccgtgcacgtgcctctcagccagaagttcaccgacttgtttgagaagatggtcccg
gtggccgtgcagcagtctctggcctgctctaaccagaggaaagccgacttggtgaacaga
ttaatcgcccagatgagggagtccaccaatctggccaacggggtcctggcatccctcaac
ctgccagcggccattgaagacatctctggggacaccgttcctcagtctattttggggaag
tcggccgccattgtcgagcagggagggatccacacggttgaccagctgatccaggatctg
cccgaactgctgcagagaaaccgagagattctcgaggaggctttaaggttgttgaatgaa
gaggaagcgaccgataacgagctgaaggccaagttcaaggagcgctggcagagaacgccg
tccaacgagctctacaagcctctgagggcagaggggaacaacttccaggcggttctggac
aaggccgtgcaggccgacggacaagtcagggagcgctatcagtctcaccgggacaccatt
gccttgctgtccaagcccgagcccgagctgaacgcggccatcccctcggccaacccggcc
aagaccatgcagggcagcgaggtggtgaccgtgctcaagtccctgctggccaacctggac
gaagtgaagaaggagcgcgagcatttggagaacgacctcaagtccatgacctttgacatg
aggggcaagttcctgtcggcgttggcgcaggatggcgccatcaacgaggaagcgctctct
gttacggaattggaccgcgtctacgggggcctcacgaaccgggtccaggattccctgaag
aagcaggaagagctgctggagagcatccaggtctcgcaccaggagttctccaagatgaag
cagtccaacaacgaggccaatctgcgcgaggaggtcctgaagaacctggcggtcgcctat
gacaactttgtggagctcgtcgccaacttgagggagggcaccaagttttacaacgagctg
acggagatcctgctgaagttccagaacaagtgcagcgacatcgtgtttgcccgcaagacc
gagagggacgagctcctgaaggatttgcagcagagcatcgcacgggagcccagtgccccc
tcccttccggcccccgcctaccagacctctcccgcggccggggggaacgcagcccctcct
acgccggcacccaggaccatgctgccttcaaagccccagcccccagcccgccctccgcct
ccggtgatctcagccagtcgcaccgcctctgcttcagccatggggactcccactccgcct
ccggctccgtccccgacaccagggctccccgcatccggctcggcccccggtgcggccccc
ggcacggccccgtcacaggcccagggaccgccgtaccctacctacccaggatacccgggg
tattgccagatgccgatgcccatgggctacaacccttacgtctacggccagtacaccctg
ccttatcctcctgcctaccctcagaatcctgccccggcgccctacccggggccccagcag
ccgcactacccattcccttcggctccccagcagccgcactacccgcagcagtag
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integrated database retrieval system
