Sarcophilus harrisii (Tasmanian devil): 100929318
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Entry
100929318 CDS
T02286
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100929318 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100929318 (LMO7)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
100929318 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_2
LIM
PDZ_6
PAZ_4
Motif
Other DBs
NCBI-GeneID:
100929318
NCBI-ProteinID:
XP_031814361
Ensembl:
ENSSHAG00000005077
LinkDB
All DBs
Position
3:117437047..117666162
Genome browser
AA seq
1773 aa
AA seq
DB search
MEGREDAESNCDVAFAEAQRWVEAVTEKNFENKDFRASLENGVLLCDLINKLKPGIIKKI
NRLSTPIAGLDNINVFLKACEKIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLIT
LYWLGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEDSSSLKRSGRDSGYGDIWYTERG
EFLSPSAYHKRDDSFDSLDSFGSRSFTSCSSDLTLKGGSEGCESDTDSELTFKMQDYNKD
DMSYRRISAVEPKSALPFNRFLPNKSRQPTYVPAPLRKKRPDKNEDNRRSWASPVYTEAD
GTFSSKQRRKWDSKVENRPAIKETSNSSSYLEEEEEEEEEEDEKATGMPNIVKDDLYVRK
LSPIVPTAGSDFDKFLPKSWIPEDVNWKRIKKTTSYKPWYKEFQGFRKNSDSEDENSVCE
QNPATFSMAQRAGQGSESNCQRRSILMDLATKQAPKSWNRNTEKRFSDASDGSSQFLLLQ
ALQTYSDDILSDETKTKVDPTSGPRIITCRRNVFYAPGYRRNDTENGVLDPDLENDDYFV
RKTGAFHANPVVLQTFEDFRRFAVPDDFIERDIILQQREGEPVLPDLEKDDMIVRRIPTQ
KKDVPLSGAPDKYHPVPFPEPWTLPPEIRARFLCVLERTSPSKDKNNSCRVLVPSSCQKK
DDMLTRKIESWKLGTTVPSISFTPGPCSEEDLKKWEAIRAASKVRHKKRQMVERLFQKIS
DENGSKSLSDITAEDVHNMRQLRYEEMQKIKSQLQEQDQQWQDDLAKWKNRRKSYTSDLQ
KKKEEREEIEKLSLERSQRSSKTFGEILQDREIRNQETNSHRWKTFDSERMYSNDEIFNE
AKMSPVPTLTRESYLNEGREKEVTYSSERSKEDSSNLPKMENYETAEIQVPSQSLTEKQS
SASALSSNHSLNTQMGPARVSASLPRSYQKTDTSRLTSVVTPRPFGSQSRGISSLPRSYT
MDDAWKYNGDVEVTKIIPETSKSSSFSKSDDNQLHSSSALTSVEEGAKESEKKTLPATPL
YLPISQEHEAFPKSEQPLTSDSLPVSGSLEGKNSSSPEPSRTKDQFSDMRIIMIHRPGNS
DPDFGFTVRWDISGIIVQSVEAGSPAALSQLQVDDEIIAVNNTKFSNKDTDKWEEIMANA
RETGNLVVDVRRYGKNDWAKDQPSLPFIRHKTLNLTSMATKIIGSPETKWIDATSGVHHT
DKASNLSIRSNFSESLQNSNMETKGINGISDENSSTEPKASEPISLKNLKRRSQFFEQGS
SDSMVPDLPVPTINAPSRWAWDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREEWQRAQ
QEAEKENSKYLDEEQMVLNSNSVSLTSREPTLANCERNWREEIYPSEREKNRAEEEERLH
HEEQKRKLEEQLLLEKERKIKELEEVQQKQRAELEEQKRQAEIEEQRRRAEIEEQGRRAE
IEEQRRRAEIEEQRRRAEIEEQRRRAEIEEQRQRAEKEKETSVQIYQYKRPVDPFEVSKR
EESTNLLPSDRDKSRSTTELDQPTSRNGSNKYFDRIGNVGYSQKSSRKEQTTSEAEMERQ
QILQEMRKKTSLHNDNSWIRQRSSSVTKEPICLPGIMRRGESLDNLDSPRSNSWRHAPWM
NQSTGFHTSSSVQDFSRPPPQIVSTSNRAYMRNPSSSLVPSSVGSIRTGSLSSAPSPAPR
TQSPSTTQSGMQQRNRSVSGKRVCSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDL
GGSSSGAEVRIRNNELYCNECYLRFKSGQPTSM
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagagaggatgcggagtccaactgtgatgtagcattcgctgaagctcagaga
tgggtggaggcagttactgagaaaaactttgaaaacaaggattttcgagcatctctagaa
aatggtgtcctgttgtgtgatttgatcaataagcttaagcctggaatcattaaaaagatc
aatcgtttatctacaccaatagcaggtttggataatataaatgtttttctaaaagcgtgt
gaaaagattggattgaaggaagctcagcttttccatcctggagatctacaggatttatcg
aatcgagtcacggtcaaacaagaagagactgatagaagagtaaaaaatgttttgattacc
ttgtattggctgggcaggaaagcacagagtaacccttactataacgggccttaccttaat
ctgaaagcatttgagaaccttttgggacaagctctgactaaggcacttgaagactccagc
agtctgaaaaggagtggcagggacagtggctacggagatatttggtatactgaacgtgga
gaatttcttagtccttcagcctaccacaaaagagacgattcctttgatagtttggattct
tttgggtctaggtcattcacaagctgttcatcagatttaactctgaaaggaggcagtgaa
ggttgtgagagtgacacagattctgaactcacattcaaaatgcaggattataacaaagat
gatatgtcctatcgaaggatatccgctgttgagcccaaatctgctttaccattcaatcgt
tttttacccaacaaaagtagacagccaacctatgtgcctgcaccactgaggaaaaaaaga
ccagacaagaatgaggataatcgaagaagttgggcgagccctgtatacactgaagctgat
ggaaccttctcaagtaaacagaggaggaaatgggactctaaagtggaaaacaggccagca
ataaaagaaacttcaaactcctctagctatttggaggaggaagaggaagaggaagaggaa
gaagatgaaaaagcaacaggcatgccaaacattgtaaaggatgatctttatgtgcgcaag
ctaagtccaatagtgcccactgcaggaagtgactttgataagtttcttcccaaaagttgg
attccagaagatgtgaattggaaaagaattaaaaagacaacttcttacaagccatggtat
aaggaatttcagggattcagaaagaattcagactcagaagatgagaattcagtctgtgaa
caaaatcctgccacttttagtatggcacagagagcagggcaaggttcagagagcaattgc
caaagacggtcaatcttgatggatctcgctactaaacaagcccccaaatcatggaacaga
aatacagaaaagagattcagtgatgcttctgatggatcaagtcagtttttattacttcag
gccttacaaacatattctgatgacatcttgtctgatgaaacaaagactaaagttgatccc
acttctggcccaaggatcataacatgccgaaggaatgtcttttatgccccgggttacaga
agaaatgatactgagaatggagtattagatcctgacttagaaaatgatgattactttgtt
aggaagactggggctttccatgcgaatcctgttgttcttcaaacttttgaagattttaga
agatttgctgtaccggatgatttcatagagagagatattattctgcaacagagagaaggt
gaacctgtacttccagatttagaaaaagatgacatgattgttcgcagaattccaacacag
aagaaagatgtgcctttatctggagccccagataaatatcacccagtcccctttccagaa
ccttggactctcccaccagaaatccgagccagatttctctgtgtacttgaaaggacatcc
ccatcaaaagacaaaaataatagctgtagagtattagttccctcttcttgtcaaaaaaag
gatgatatgttgactcgtaagattgagtcctggaagctaggaacaactgtaccatccatc
agttttactcctgggccatgcagtgaagaggacttaaaaaaatgggaggctatccgagca
gccagcaaagttaggcacaagaaacgacagatggttgagagactctttcaaaagatttct
gatgagaatgggagcaaatccttgagtgatatcactgcagaagatgtacacaatatgcgc
caactacgctatgaagaaatgcagaaaataaaatcacaattgcaagaacaagaccagcag
tggcaggatgacctagcaaaatggaaaaatcgtcgaaaaagctatacttcagatctgcaa
aagaaaaaggaagagagggaagaaattgaaaagttgtctcttgagaggtctcagaggagc
tcaaaaacatttggagaaattcttcaggaccgggaaatcagaaaccaagaaaccaacagt
catcgttggaaaacatttgattctgagagaatgtattctaatgatgagatattcaatgaa
gcaaaaatgtctcctgtgccaactttgacaagagaaagttacctgaatgaggggagagag
aaggaagtaacttatagttcagaaaggagtaaagaagattcttcaaaccttccaaagatg
gagaactatgaaacagctgaaattcaagttccttctcaaagcctgacagagaaacagagc
tcggcctcagctttgtcttctaaccattcactgaatacacaaatgggacctgctcgggtt
tcagcatctctccccagaagttaccagaaaactgatacatctaggttaacatcggtggtt
acgccaagaccttttggttcccagtcaagagggatctcatcacttcccagatcttatacg
atggatgatgcttggaagtacaatggagatgtggaagtcactaaaataattccagaaact
tcaaaaagtagctctttctcaaaatcagatgacaaccagcttcactcaagctcagcctta
acaagtgttgaagagggagcaaaagaaagtgagaagaaaacattacctgctacacccttg
tatttgcccatttcccaggaacatgaggctttccctaaatcagaacaacctttaacatca
gactctttaccagtttctggatctttagaagggaaaaattcttcatcacctgagccttca
aggacaaaggatcagttcagtgatatgagaatcattatgatccaccgccctgggaatagt
gatcctgactttggatttacagtaagatgggatatttctggaatcatcgtgcaatcagtt
gaagcaggtagcccagcagcattatctcagctacaggtagatgatgaaattattgctgtt
aacaacaccaagttttcaaataaggacacagataaatgggaagagatcatggctaatgca
cgagaaactggaaacttagttgtagatgtcagacgttatggaaaaaatgactgggccaaa
gaccaaccttccctgccatttataaggcataaaaccctcaatctcaccagtatggctacc
aaaattataggttcacctgaaactaagtggattgatgcaacttctggagttcaccataca
gacaaggcttcaaatctttcaataagaagcaatttctctgaaagtcttcaaaattctaat
atggaaacaaaaggaataaatggcataagtgatgaaaatagttctactgaacccaaagca
tctgaacctatttctttgaaaaacttaaaaaggcgatcacaattttttgaacaaggaagt
tctgattctatggtacctgatcttccagttccaaccatcaatgctcctagtcgctgggct
tgggatcaagaagaagagaggaaacgacaggaaaaatggcaaaaagaacaggatcgtttg
ttgcaggaaaagtatcaacgtgaacaggaaaaactgagggaggaatggcagagggctcaa
caagaggctgagaaggagaactcaaaatacttagatgaggaacagatggtattaaattca
aatagtgtttctctcacctcgcgtgagcctactcttgccaactgtgaaagaaattggaga
gaagaaatttatccttcagaaagggaaaaaaacagagcagaggaggaagaaagactccat
catgaagaacaaaaaaggaaattagaagagcaacttctccttgagaaagagaggaaaata
aaggaactggaagaagtgcaacagaaacaacgggcagagttagaggaacagaagcgacag
gcagagatagaggaacagaggcggcgggcagagatagaggaacaggggcggcgggcagag
atagaagaacagaggcggcgggcagagatagaagaacagaggcggcgggcagagatagaa
gaacagaggcggcgggcagagatagaagaacagaggcagcgggctgagaaagagaaagaa
acatctgtgcagatatatcagtataaaaggcctgttgatccttttgaagtatcaaagcga
gaagagtcaacaaatctacttcctagtgacagggataaatcaaggtctactactgaatta
gatcagcccacaagtagaaatgggagtaataaatatttcgaccggattgggaatgtgggc
tattcacagaaaagttctcgaaaagagcagaccacatcagaagctgagatggagagacaa
caaatccttcaggaaatgaggaagaaaacctctctccataatgacaacagctggattaga
cagcggagttctagtgtcaccaaagagcccatctgcttgcccggcatcatgagaagaggt
gaatctctagataatctagattcccctagatcaaattcatggagacatgccccttggatg
aatcaatctacagggtttcatacttcttcatctgtgcaagacttcagtcgtccacctcca
caaattgtatctacatccaaccgtgcttacatgcgaaatccatcttccagtttagtacct
tcttctgttgggtctatacgaactggatctttatcatcagcaccttccccagcacctcga
acacaatccccttctactactcagtcagggatgcagcaacgaaataggtcagtcagtggg
aagagagtatgctcctactgtaataacattctgggcaagggagcggccatgatcatcgag
tctttggggctttgttatcatttacattgttttaagtgtgtggcctgtgagtgtgacctc
ggaggctccagctcaggagcagaagtcagaatccgaaataatgaattgtactgcaatgag
tgctatctccgattcaaatctggacagccaacctccatgtga
DBGET
integrated database retrieval system
