Sarcophilus harrisii (Tasmanian devil): 100929342
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Entry
100929342 CDS
T02286
Symbol
NRCAM
Name
(RefSeq) neuronal cell adhesion molecule isoform X1
KO
K06756
neuronal cell adhesion molecule
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100929342 (NRCAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100929342 (NRCAM)
Cell adhesion molecules [BR:
shr04515
]
Immunoglobulin superfamily
L1 family
100929342 (NRCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
C2-set_3
Sp38
SIT
fn3_2
Motif
Other DBs
NCBI-GeneID:
100929342
NCBI-ProteinID:
XP_031794628
Ensembl:
ENSSHAG00000008378
LinkDB
All DBs
Position
5:complement(152270238..152585747)
Genome browser
AA seq
1322 aa
AA seq
DB search
MRLKIMPLKKSFSVHRVPLILFLCQLMSALEVPLDQLENLVQPPTITRQSPKDYIIDPRE
NIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPNSGTLVISITIEGKAETYEGVYQ
CTARNERGAAISNNIIIRPSRSPLWTKEKLEQITILKGQSLVLPCRPPLGLPPPIIFWMD
NSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYVCYARFNHTQTIQQKQPISVKVHSMD
ELNDTITANLSDSEFYGAKSYIERPPKLLSPEGRTSHKEELRENVLSLECIAEGLPTPSI
TWTKEDGELPINRTSYTNFRKTLNINLVSEADSGKYKCTARNPLGFVEHTISVTVKAAPY
WITAPKNLVLSPGEDGTLICRANGNPKPKISWLTNGVPIEMAPDDPSRKIDGDTILFSDV
QESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTDANLHYQVITDRPAMLDCAFFGSP
IPTFKWFKGTKGSVLQENTYIFHDNGTLEIPVAQKDSAGTYTCVVRNKLGMAKNDVHLEI
KDPTRIIKHPEYKVVQRGGKVSFECKVKHDPTLIATLTWLKDNGELPNDGRFSIDNDHLV
IMNISDEDDATYTCVANTSLDIVSASAVLRVVAPVYDRPNPPFDLELTSLLERSVQLSWI
PGDENNSPITDFIIEYEDSLHEPGIWHHHSDVPGTQTTAELKLSPYVKYSFRVIAVNSIG
RSLPSEVSEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQ
KDGDDEWTSVVVANVSKYIVSGTPTFVPYLVKVQALNDVGFAPEPVIIIGHSGEDLPMVA
PSNVHVNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNKRHVEKKILTFNG
NKTHGMLPGLEPFSHYMLNVRVVNGKGEGPASVDRVFNTPEGVPSAPLFLKIVNPTLDSL
TLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDIKIPANMTSLILRNLSYNTRYKFYF
YAQTSAGSGSQITEEAVTTVDEGKMAGVHPPAVGADKEIHFATSPAMHTSRPTFYKVRPV
NPRIRNVTAAAAETYANISWEYEGPDHVHFYVEYGVAGSKEEWRKEIVNGSRSFFGLKGL
LPGTSYKVRVGAEGDSGFVSSEDVFETGPAMASRQVDIATQGWFIGLMCAVALLILILLI
VCFIRRNKGGKYPVKEKEDAHADPEIQPMKEDDGTFGEYRSLESDAEDHKPSKKGSRTPS
DRTVKKEDSDDSLVDYGEGVNGQFNEDGSFIGQYSGKKEKEPAEGNESSEAPSPVNAMNS
FV
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttaaaatcatgcccctaaagaagagcttttctgtacaccgagttcctttgatt
ctcttcctatgccagttgatgagtgccctggaagtccctcttgatcaacttgaaaatttg
gtgcaacctccaactatcactcgtcaatctccaaaagattacattattgacccccgagag
aatattgaaatccaatgtgaggcaaaaggaaaaccacctcccagcttctcctggacacgc
aatgggactcattttgacatagacaaagatcccctagtaaaaatgctgcccaactcagga
acccttgtaatcagcattacaattgaagggaaggcagagacatatgaaggagtctatcag
tgtactgcaaggaatgaacgtggggcagcaatttctaataatattataattcgtccatcc
agatctcccttgtggaccaaagaaaaactggaacaaatcacaattctgaaaggacagtct
ctcgtacttccttgcagaccccctcttggattgccaccacctattatattttggatggac
aattcttttcaacgccttccgcaaagtgaaagggtttcccaaggtctaaatggagacctt
tatttttctaatgtgctaccagaagacactcgtgaagattatgtttgttatgcaagattt
aatcatactcagaccatccagcagaagcaacccatttctgtgaaagtccattcaatggat
gaattgaatgacactataactgctaatttgagtgactctgagttttacggtgccaagtcc
tatattgagaggccaccaaaacttttgagtccagaaggccgcacaagtcacaaagaagag
ttacgagaaaatgttctttccttagaatgtattgcagaaggcttgcctactccctctatt
acctggacaaaagaagatggagagctacctatcaatcggacatcttacacaaactttagg
aaaactttgaatattaatcttgtttcagaggcagattctggaaaatacaaatgtacagca
agaaatcctttaggctttgttgaacataccatttcagtcacagtcaaagcggccccatac
tggatcacagcacctaaaaaccttgtgctgtcccctggggaagatgggactttgatctgc
agagctaatggaaatcccaaacccaaaattagctggttaacaaatggtgttccaatagaa
atggctcctgatgatcccagcagaaaaatagatggtgatactatcctcttttctgatgtt
caagaaagctccagtgctgtttatcaatgcaatgcttcaaatgaatatggatacttgctg
gctaatgcatttgtaaatgttttggccgagccaccaaggatactcactgatgccaatttg
cactatcaggtcattacagataggcctgctatgttagattgtgctttctttggttctccc
attcctaccttcaaatggtttaagggaacaaaaggaagtgttcttcaagagaacacatac
atatttcatgacaatggaactttggaaattcctgtggcccagaaggatagtgcaggcaca
tatacatgtgtagtaagaaacaaattagggatggcaaaaaatgatgttcatctagaaatc
aaagatccaaccagaatcattaaacatcctgaatataaagttgtacagagaggtggcaaa
gtttcctttgaatgcaaagtgaaacatgatccaactttaatagctactctcacatggctg
aaggataatggtgagctgccaaatgatggaaggttcagtatcgataatgatcatctggtt
ataatgaacataagtgatgaagatgatgcaacctatacttgtgtagcaaatacatctttg
gacattgtttctgcaagtgctgtgcttagagttgttgctcctgtttacgatcgtccaaat
ccaccctttgatttggaattgacaagtctccttgaaagaagtgttcaactgtcgtggata
ccaggagatgaaaacaatagccctattacagatttcatcattgaatatgaagattccttg
cacgagccaggaatatggcatcaccacagtgacgttcctggaacacaaacaacagcagag
ttgaaactttctccttacgtaaaatattctttccgtgtaattgctgtcaacagtattggt
agaagtcttcctagtgaagtatcagaatattatatgactaaagcagcagaaccagaagag
aatcctactgctgttgaaggaataggatcagagcctgataatctggtgattacatggcag
ccattaaaaggttttgattctaatggacctggtcttcagtataaagtcagctggcgtcag
aaagatggtgatgatgagtggacgtctgttgtagttgcaaacgtatccaaatacattgta
tcaggcacaccaacctttgttccatatttggtgaaagtacaggcactaaatgatgtggga
tttgctccagagcctgtgataatcattgggcattctggagaggacttaccaatggtggct
cccagcaatgtgcatgtgaatgtggtgaatagcaccttggctgaagtacactgggagcct
gtacccccaaaaagtattcgaggacacttgaaaggctatcggatttactactggaaagtg
aaaaattcatctaagaggaacaagcgtcatgttgaaaaaaaaatcctcaccttcaatggc
aacaagacacatggcatgttgcctggcttggagccatttagccattacatgctgaatgtt
cgagttgtcaatgggaaaggagaggggcctgccagtgttgaccgagtatttaatactcca
gaaggagtccccagtgctcctctttttctgaagatcgttaatccaacccttgattcacta
actctggaatgggatccaccaagtcatccaaatggtattttgacagcatataccctaaag
tttcagccaattaacagcacacatgaattgggtcctttggtagatataaaaattccagcc
aacatgacaagcctaattttaagaaatttaagttacaacacacgctataagttttatttc
tatgcacaaacctcagcaggatctggaagtcaaataactgaggaagctgtgacaactgtg
gatgaaggtaagatggctggtgttcacccacctgctgtgggtgcagacaaagaaatccat
tttgcaacttctcctgctatgcatactagccgtccaacattctataaggttcgaccagtt
aatccaaggatccgaaatgttaccgcggctgccgctgaaacctatgccaacatcagttgg
gaatatgagggaccagatcatgtccacttttatgttgaatatggtgtagcagggagcaaa
gaagaatggagaaaagaaattgtaaatggttctcggagcttctttgggttaaagggtctc
ctgccaggaacatcttacaaagttcgagttggtgctgagggggactcaggttttgtgagt
tctgaggatgtatttgagacaggtccagcaatggcaagccggcaagtggacattgctact
caaggctggttcattggtctgatgtgtgctgttgctcttctcatattgattttgttgatc
gtttgcttcatcagaagaaacaaaggtggtaaatatccagtcaaagaaaaagaagatgca
catgctgatccagaaattcagcctatgaaggaagatgatggaacttttggagaatacagg
tctcttgaaagtgatgcagaggatcataaaccttcaaaaaagggaagtcgaacaccttca
gacaggactgtgaaaaaggaagatagtgatgatagtttggttgactatggagaaggggta
aatggccagttcaatgaggatggttctttcattggacaatatagtggtaagaaagagaaa
gaaccagcagaaggaaatgaaagttctgaagctccttctcctgtcaatgccatgaactcc
tttgtttaa
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integrated database retrieval system
