Sarcophilus harrisii (Tasmanian devil): 100929520
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Entry
100929520 CDS
T02286
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04350
TGF-beta signaling pathway
shr04919
Thyroid hormone signaling pathway
shr05016
Huntington disease
shr05169
Epstein-Barr virus infection
shr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100929520 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100929520 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100929520 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100929520 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
100929520 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100929520 (SIN3A)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100929520 (SIN3A)
REST complex
100929520 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100929520 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Stealth_CR3
Motif
Other DBs
NCBI-GeneID:
100929520
NCBI-ProteinID:
XP_031812434
Ensembl:
ENSSHAG00000001069
UniProt:
G3VDE2
LinkDB
All DBs
Position
2:616212521..616286754
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYASQQRRIASSTEAFPHQHRVLAPAPPVYETVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPTLATVHSGHHHTTSVQPHGGQVVQSHAHPTPPAAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQAQPQHPSQPSAQSTPTPAQ
PAPQPPPAKISKPSQLQAHAPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
SQNGCQIRRHSGTGTTPPVKKKPKLLSLKDQPLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRPELVQLVSPFLGKFPELFTWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETIQKKLSRLSAEEQAKFRLDNTLGG
SSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDNSGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDETTGAAKKHNGVGGSPPKSKLLFSNTAAQKFRGMDDVYNLFYVNNNWYIFLRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENSNSATGGTLNTQTSRTLMESTYQRKAEQLMSDENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKDGNSKKSMENVESLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVTREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgcttggatgaccaggagtcacctgtgtatgcgtcccagcagcgacgtatt
gccagcagcacagaagcatttccacatcagcatcgtgtgcttgcccctgcacctcctgtg
tatgagacagtctctgagaccatgcagtcagccacaggaattcagtactctgttactccc
agctatcaggtttcagctgtgccccagagctctggcagccatggccccacgctagcaact
gttcacagtggccaccatcacacaacatctgttcaacctcatggaggacaggtggttcag
agccatgctcatccaaccccaccagctgcaccagtgcagggacaacagcaatttcagaga
ctcaaggtggaggatgctctatcctaccttgaccaggtaaagctgcagtttggtagtcag
cctcaggtctacaatgatttcctggacatcatgaaggaatttaaatctcaaagtattgat
actccaggagtgattagtcgggtgtcacagctattcaaaggccaccctgacttgatcatg
ggcttcaacacctttttacctcctggttataaaatcgaggtgcagaccaacgacatggta
aatgtgacaactcctggccaagtccaccagattcccacccacggcatccaacctcaacct
caagcccagccccagcatccttcccaaccgtcagctcagtccaccccaactcctgcccag
ccagcccctcagccaccacctgccaaaattagcaagccatcccagctccaagcacatgct
ccagccagccagcagacacctcccctcccaccatatgcttcaccacgttctccaccggtg
cagcctcacacacctgtgacaatctccctgggaactgccccatccttgcagaacaatcag
cctgtggagtttaatcatgccatcaactatgttaacaaaattaaaaatagattccagggt
cagccagatatctataaagcttttctggagattttgcacacatatcagaaggagcagcgg
aatgccaaggaagctggagggaattacacgccagccctgacagagcaggaggtgtatgca
caggtggcccgtctgtttaagaatcaggaagacctcctctcagagtttgggcagttcctc
cctgatgccaatagctctgtgttattaagtaagacaactgcagagaaggttgagtctgtg
aggaatgatcatggaggcacggtgaagaaaccccagctgaacaacaagcagcagaggccc
agccagaatggttgccagatccgccgccactctgggactggaacaactccccctgtgaag
aagaaacccaaactattaagcttaaaggaccagcccttggcagaagccagtaaacatggt
gtaggaactgaatccttgttctttgagaaggtccggaaggccttgaggagcacagaagcc
tatgagaattttctgcgttgtctggtcatctttaaccaagaggtcatctctaggccagag
cttgtgcaacttgtctctccttttctggggaaattcccagaattgttcacatggtttaag
aattttctggggtataaagaatctgttcatttggagacctttccaaaagagcgtgccaca
gagggcattgccatggagatagattatgcttcttgtaaaaggttggggtcaagctatcga
gccttgcccaagagctaccagcagcctaaatgcacaggaagaacaccactgtgtaaggag
gttttaaatgatacttgggtgtcctttccatcatggtctgaggattccacttttgtcagt
tcaaagaagacacagtatgaagaacacatttatagatgtgaggatgaacgctttgagctt
gatgtggtcttagaaaccaatctggcaaccatccgggtcctagagacaattcagaagaaa
ctgtcacgattgtctgctgaggagcaggccaaattccgcttagacaacactctgggcggc
tcttctgaggtgattcaccgaaaagcgctccagaggatctatgctgataaagctgctgac
attattgatggcctgagaaagaatccatccattgctgtccccatagttctgaagaggttg
aagatgaaagaggaggaatggagagaagctcagagagggttcaacaaagtttggagggag
caaaatgagaagtattacctgaagtccctagaccaccagggaatcaacttcaaacaaaac
gacaccaaggttctgaggtcgaagagcttactcaatgaaatagagagcatctatgatgaa
aggcaagagcaggctacagaagataattctggagtccctgttggcccgcacctttctctc
gcctatgaagacaaacagatattggaagatgctgctgctttgattatccatcatgtaaag
aggcaaacaggaatccaaaaagaagacaagtataaaatcaagcagatcatgcatcatttc
attccagatcttctctttgcccagagaggtgacctctcagatgtggaagaggaagaggag
gaagagatggatgtggatgaaaccacaggagctgccaaaaagcacaacggggtgggcggc
agccccccgaaatcaaagctactattcagcaacacagcagctcagaagtttcgtgggatg
gatgatgtctacaatctcttctatgtcaacaacaattggtatatcttcctaaggctgcac
cagattctgtgcttaaggctgctgagaatttgttcccaagctgagcgacagattgaagaa
gaaaaccgggaaagagaatgggaacgggaagtactgggaataaagcgggacaagagtgac
agcccggccatccagcttaggctcaaagaacccatggatgtcgatgtagaagattattac
ccagccttcctggatatggtacggagcctcctggatggcaacatagattcttcacaatat
gaggactccctaagagagatgttcactattcatgcctatatcgcctttaccatggacaaa
ttgatccagagtattgtgagacagctccagcacattgtaagtgatgagatttgtgtacaa
gtgactgacctctacttatcagaaaacagcaacagtgccacgggtggcaccttaaataca
caaacctctcgaaccctcatggaatccacatatcagcgtaaagcagagcagctcatgtca
gatgagaactgctttaagctcatgttcattcagagccgtggccaagttcagctgacaatc
gagctgctagacacagaagaagagaactcagatgaccccgtggaggcagagcgatggtca
gactatgttgagcgctatgtgaactcagatactacctccccagaactcagagagcatctg
gcccagaagccagtatttctgccaaggaatctaaggcggatccgtaaatgtcagcgtgga
cgggaacagcaagagaaggaaggcaaagatggaaatagcaagaagagcatggaaaatgtg
gagagcttggacaagctggagtgccgattcaaactgaattcttataaaatggtatatgtg
atcaaatcagaagactacatgtaccgcaggacggctttgctacgtgctcagcagtcccat
gaacgagtaagcaagcggctgcaccaacggttccaggcctgggtggacaaatggaccaag
gaacatgtaacccgtgaaatggcagctgagaccaacaaatggctgatgggtgaagggctg
gagggcttggtgccctgtaccaccacctgtgacacagagaccctgcactttgtgagcatt
aacaagtatcgtgtcaaatacggcacaatattcaagacgccctaa
DBGET
integrated database retrieval system
