Sarcophilus harrisii (Tasmanian devil): 100929532
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Entry
100929532 CDS
T02286
Name
(RefSeq) CCR4-NOT transcription complex subunit 7-like
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100929532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100929532
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100929532
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100929532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
100929532
NCBI-ProteinID:
XP_023363054
UniProt:
A0A7N4NRM9
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Position
X:complement(16027035..16030512)
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AA seq
405 aa
AA seq
DB search
MRSCCSSLVPDGSPPCAPPQPTMPAARAEQSPRIREVWACNLDEEMKKMRPVIQKYNYVA
MDTEFPGVVAKPVGEFRSYADYQYQLLRCNVDWLKIIQLGLTFMNEQGECPPGTSTWQFN
FKFNLKEDMYAQDSIELLTMSGIQFKKHEEEGIETQYFAELLMTSGVVLCDGVKWLSFHS
GYDFGYFIKMLTNSPLPEEARDFFEILRLFFPVIYDIKYLMKSCKNLRGGLQEVATQLEL
ERIGSQHQAGSDSLLTGMTFFKMREMFFEDHIDDAKYSGYLYGLGSGASHVHSNNHPGYQ
NRYPGPYHSNYPPTVPHNFPDGYPGGYAGGFQNNYPNGFQQSYQTNFQNTIPDLQNVHNV
PNIQYVQYVHYGQEPEWRGDQQAYMSMQEMPAFEGEDPQFYTYGE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagaagctgctgcagctcgctagtgccggacggctctccgccttgcgctccacctcaa
cccaccatgccagccgcccgtgccgagcagagcccgcggatccgggaagtttgggcttgc
aacctggacgaggagatgaagaaaatgcgacccgttatccagaaatacaattacgtggct
atggatacggagttcccaggtgtggtggcgaaacctgtcggagaattcagaagctacgcc
gactaccagtaccaactgctgaggtgcaatgtggactggctgaagatcatccagctgggg
ctgacgttcatgaacgagcaaggagagtgccccccgggaacctccacgtggcaattcaac
tttaaattcaatctgaaggaagatatgtacgcccaggattccatagagctcctgaccatg
tccgggatccagttcaagaaacatgaagaagaggggatcgagacccagtattttgcggag
ctcctgatgacatcgggagtggtgctgtgtgacggggtcaagtggctatcctttcacagc
ggctacgacttcggctacttcatcaagatgctcaccaactctcctttgcccgaagaagcc
cgcgactttttcgagattctccgactgttctttccggtcatctatgatatcaagtacctc
atgaagagctgcaaaaacctcaggggtggactgcaggaagtggccactcagctggagctg
gagcgcatagggtcccagcaccaggcagggtccgattcgctactcacaggtatgaccttt
ttcaaaatgagagaaatgttctttgaagaccacatcgacgatgccaagtattctggctac
ctgtacggcctcggttcgggagcttctcatgtccacagcaacaaccatcccggctaccag
aaccgctacccgggcccctaccacagcaactacccacccactgtcccgcacaatttcccg
gacggctaccccggcggctatgccggcggcttccagaacaactacccgaacggttttcag
cagagctatcaaactaacttccaaaacaccatcccggatctccagaatgtccacaatgtc
cccaatatccaatatgtccagtatgttcactatggccaagaacccgaatggagaggagac
cagcaagcatacatgagcatgcaagagatgccagcgtttgagggtgaagaccctcaattc
tacacctatggagaatga
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